Rattus norvegicus

0 known processes

Usp13

ubiquitin specific protease 13 (isopeptidase T-3)

Usp13 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
transmembrane transport GO:0055085 412 0.121
protein complex biogenesis GO:0070271 263 0.108
neuron projection development GO:0031175 273 0.080
cell projection organization GO:0030030 302 0.072
cellular component assembly GO:0022607 360 0.071
regulation of multicellular organismal development GO:2000026 376 0.067
neuron differentiation GO:0030182 368 0.064
cellular homeostasis GO:0019725 252 0.062
macromolecular complex assembly GO:0065003 273 0.060
cellular component biogenesis GO:0044085 368 0.059
protein complex assembly GO:0006461 263 0.057
cation transport GO:0006812 382 0.057
regulation of neuron differentiation GO:0045664 208 0.054
macromolecular complex subunit organization GO:0043933 339 0.053
positive regulation of cell development GO:0010720 176 0.041
protein complex subunit organization GO:0071822 302 0.041
response to extracellular stimulus GO:0009991 380 0.040
regulation of cellular component organization GO:0051128 368 0.039
positive regulation of neurogenesis GO:0050769 165 0.039
cation transmembrane transport GO:0098655 263 0.038
regulation of neurogenesis GO:0050767 247 0.038
heart morphogenesis GO:0003007 3 0.038
neuron development GO:0048666 286 0.037
response to nutrient levels GO:0031667 370 0.036
positive regulation of multicellular organismal process GO:0051240 387 0.036
ion homeostasis GO:0050801 212 0.035
homeostatic process GO:0042592 331 0.035
anatomical structure morphogenesis GO:0009653 298 0.034
secretion GO:0046903 307 0.034
multi organism reproductive process GO:0044703 262 0.033
regulation of cell differentiation GO:0045595 320 0.033
cellular chemical homeostasis GO:0055082 247 0.033
blood circulation GO:0008015 183 0.033
muscle structure development GO:0061061 87 0.033
response to estrogen GO:0043627 232 0.033
negative regulation of multicellular organismal process GO:0051241 203 0.032
regulation of nervous system development GO:0051960 264 0.032
positive regulation of neuron projection development GO:0010976 99 0.032
response to inorganic substance GO:0010035 377 0.031
regulation of cell development GO:0060284 263 0.031
protein oligomerization GO:0051259 191 0.030
response to hypoxia GO:0001666 231 0.029
positive regulation of developmental process GO:0051094 283 0.028
response to nutrient GO:0007584 248 0.028
cellular response to endogenous stimulus GO:0071495 377 0.027
transcription dna templated GO:0006351 377 0.027
response to oxygen levels GO:0070482 265 0.027
response to decreased oxygen levels GO:0036293 237 0.027
organic acid metabolic process GO:0006082 292 0.026
chemical homeostasis GO:0048878 292 0.026
positive regulation of cell communication GO:0010647 271 0.025
nucleotide metabolic process GO:0009117 279 0.025
nucleic acid templated transcription GO:0097659 379 0.025
regulation of secretion GO:0051046 224 0.025
metal ion transport GO:0030001 289 0.025
multicellular organismal reproductive process GO:0048609 233 0.025
regulation of molecular function GO:0065009 398 0.024
cellular response to oxygen containing compound GO:1901701 386 0.024
positive regulation of nervous system development GO:0051962 178 0.023
glucan metabolic process GO:0044042 23 0.023
positive regulation of ion transport GO:0043270 94 0.023
nucleobase containing small molecule metabolic process GO:0055086 316 0.023
response to growth factor GO:0070848 189 0.023
rna metabolic process GO:0016070 406 0.022
neuron projection morphogenesis GO:0048812 122 0.022
cellular response to stress GO:0033554 269 0.022
carbohydrate derivative metabolic process GO:1901135 346 0.022
negative regulation of cellular metabolic process GO:0031324 281 0.022
regulation of cell projection organization GO:0031344 175 0.022
nucleoside phosphate metabolic process GO:0006753 283 0.021
oxoacid metabolic process GO:0043436 290 0.021
cell projection morphogenesis GO:0048858 123 0.021
central nervous system development GO:0007417 311 0.021
cellular cation homeostasis GO:0030003 180 0.021
tissue development GO:0009888 252 0.021
inorganic cation transmembrane transport GO:0098662 202 0.021
protein phosphorylation GO:0006468 345 0.020
cellular metal ion homeostasis GO:0006875 172 0.020
positive regulation of cell differentiation GO:0045597 217 0.020
circulatory system development GO:0072359 134 0.020
cellular component morphogenesis GO:0032989 155 0.020
regulation of system process GO:0044057 208 0.020
inorganic ion transmembrane transport GO:0098660 229 0.020
organelle organization GO:0006996 266 0.020
glycosyl compound metabolic process GO:1901657 182 0.020
heart development GO:0007507 72 0.019
response to metal ion GO:0010038 253 0.019
positive regulation of signal transduction GO:0009967 175 0.019
muscle system process GO:0003012 115 0.019
cellular response to hormone stimulus GO:0032870 247 0.019
cardiac chamber development GO:0003205 1 0.019
circulatory system process GO:0003013 183 0.019
single organism biosynthetic process GO:0044711 342 0.019
ion transmembrane transport GO:0034220 365 0.019
reproductive process GO:0022414 372 0.019
regulation of signal transduction GO:0009966 318 0.019
carboxylic acid metabolic process GO:0019752 289 0.019
regulation of dendrite development GO:0050773 59 0.018
regulation of cellular amino acid metabolic process GO:0006521 2 0.018
response to biotic stimulus GO:0009607 226 0.018
cellular protein complex assembly GO:0043623 44 0.018
regulation of rna biosynthetic process GO:2001141 381 0.018
single organism catabolic process GO:0044712 283 0.018
organophosphate metabolic process GO:0019637 370 0.018
regulation of transcription dna templated GO:0006355 374 0.018
negative regulation of developmental process GO:0051093 125 0.017
response to estradiol GO:0032355 164 0.017
positive regulation of neuron differentiation GO:0045666 126 0.017
cellular amino acid metabolic process GO:0006520 107 0.017
cardiovascular system development GO:0072358 134 0.017
cellular divalent inorganic cation homeostasis GO:0072503 162 0.017
cell part morphogenesis GO:0032990 123 0.017
cellular amine metabolic process GO:0044106 38 0.017
cellular calcium ion homeostasis GO:0006874 160 0.017
vesicle mediated transport GO:0016192 181 0.017
secretion by cell GO:0032940 248 0.017
growth GO:0040007 165 0.017
sarcoplasmic reticulum calcium ion transport GO:0070296 8 0.016
cardiac muscle contraction GO:0060048 27 0.016
dendrite development GO:0016358 72 0.016
rna biosynthetic process GO:0032774 380 0.016
positive regulation of rna biosynthetic process GO:1902680 197 0.016
sexual reproduction GO:0019953 148 0.016
reproduction GO:0000003 245 0.016
transcription from rna polymerase ii promoter GO:0006366 252 0.016
cellular potassium ion transport GO:0071804 72 0.016
positive regulation of cell projection organization GO:0031346 111 0.016
protein homooligomerization GO:0051260 91 0.016
regulation of cell proliferation GO:0042127 359 0.016
regulation of phosphorylation GO:0042325 248 0.016
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.016
response to peptide hormone GO:0043434 278 0.016
oxidation reduction process GO:0055114 304 0.016
response to molecule of bacterial origin GO:0002237 194 0.015
response to glucose GO:0009749 136 0.015
multi multicellular organism process GO:0044706 138 0.015
regulation of cellular protein metabolic process GO:0032268 267 0.015
cellular response to organonitrogen compound GO:0071417 197 0.015
generation of precursor metabolites and energy GO:0006091 62 0.015
ribonucleotide metabolic process GO:0009259 231 0.015
bmp signaling pathway GO:0030509 4 0.015
regulation of cellular localization GO:0060341 263 0.015
positive regulation of nucleic acid templated transcription GO:1903508 197 0.015
apoptotic process GO:0006915 381 0.015
positive regulation of signaling GO:0023056 270 0.015
negative regulation of cell communication GO:0010648 158 0.015
mapk cascade GO:0000165 140 0.015
potassium ion transport GO:0006813 97 0.015
response to cytokine GO:0034097 215 0.015
cellular catabolic process GO:0044248 295 0.015
intracellular signal transduction GO:0035556 314 0.015
regulation of membrane potential GO:0042391 110 0.015
negative regulation of cell differentiation GO:0045596 99 0.015
divalent inorganic cation transport GO:0072511 134 0.015
regulation of anatomical structure size GO:0090066 135 0.014
cellular response to external stimulus GO:0071496 118 0.014
calcium ion homeostasis GO:0055074 162 0.014
cellular polysaccharide metabolic process GO:0044264 23 0.014
nucleoside monophosphate metabolic process GO:0009123 93 0.014
neurological system process GO:0050877 219 0.014
positive regulation of cell proliferation GO:0008284 249 0.014
intracellular transport GO:0046907 185 0.014
regulation of blood circulation GO:1903522 110 0.014
aging GO:0007568 241 0.014
cardiac muscle cell contraction GO:0086003 10 0.014
organonitrogen compound catabolic process GO:1901565 179 0.014
response to carbohydrate GO:0009743 183 0.014
cellular response to nitrogen compound GO:1901699 210 0.014
regulation of establishment of planar polarity GO:0090175 2 0.014
purine nucleotide metabolic process GO:0006163 229 0.014
regulation of nucleic acid templated transcription GO:1903506 380 0.014
positive regulation of cellular biosynthetic process GO:0031328 295 0.014
multicellular organism reproduction GO:0032504 233 0.014
cellular component movement GO:0006928 248 0.013
ribose phosphate metabolic process GO:0019693 235 0.013
positive regulation of molecular function GO:0044093 230 0.013
response to bacterium GO:0009617 200 0.013
regulation of phosphate metabolic process GO:0019220 349 0.013
locomotion GO:0040011 237 0.013
potassium ion transmembrane transport GO:0071805 71 0.013
response to external biotic stimulus GO:0043207 221 0.013
monovalent inorganic cation transport GO:0015672 172 0.013
single organism reproductive process GO:0044702 297 0.013
actin filament based process GO:0030029 86 0.013
regulation of phosphorus metabolic process GO:0051174 349 0.013
response to hexose GO:0009746 144 0.013
regulation of sodium ion transmembrane transporter activity GO:2000649 4 0.013
regulation of metal ion transport GO:0010959 118 0.013
cellular ion homeostasis GO:0006873 184 0.013
cellular response to peptide GO:1901653 133 0.013
response to oxidative stress GO:0006979 186 0.013
regulation of cellular ketone metabolic process GO:0010565 27 0.013
cellular response to growth factor stimulus GO:0071363 162 0.013
ribonucleoside metabolic process GO:0009119 174 0.013
cellular carbohydrate metabolic process GO:0044262 72 0.013
head development GO:0060322 247 0.013
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.013
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.013
embryonic skeletal system development GO:0048706 3 0.013
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathway GO:0090101 2 0.012
amine metabolic process GO:0009308 38 0.012
regulation of cellular amine metabolic process GO:0033238 8 0.012
response to monosaccharide GO:0034284 159 0.012
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.012
organic substance catabolic process GO:1901575 316 0.012
response to other organism GO:0051707 220 0.012
neuronal action potential GO:0019228 35 0.012
regulation of rna metabolic process GO:0051252 391 0.012
positive regulation of phosphorus metabolic process GO:0010562 262 0.012
regulation of protein metabolic process GO:0051246 289 0.012
divalent inorganic cation homeostasis GO:0072507 165 0.012
positive regulation of transport GO:0051050 245 0.012
axon development GO:0061564 96 0.012
negative regulation of macromolecule metabolic process GO:0010605 260 0.012
brain development GO:0007420 247 0.012
regulation of anatomical structure morphogenesis GO:0022603 141 0.012
glycogen metabolic process GO:0005977 23 0.012
positive regulation of cellular amine metabolic process GO:0033240 3 0.012
regulation of intracellular signal transduction GO:1902531 218 0.012
purine ribonucleotide metabolic process GO:0009150 227 0.012
positive regulation of cellular component organization GO:0051130 200 0.012
programmed cell death GO:0012501 392 0.012
peptidyl amino acid modification GO:0018193 126 0.012
actin filament based movement GO:0030048 16 0.012
urogenital system development GO:0001655 78 0.012
purine nucleoside triphosphate metabolic process GO:0009144 141 0.012
response to vitamin GO:0033273 131 0.012
response to electrical stimulus GO:0051602 56 0.011
nitrogen compound transport GO:0071705 229 0.011
cellular ketone metabolic process GO:0042180 51 0.011
carbohydrate derivative biosynthetic process GO:1901137 124 0.011
striated muscle contraction GO:0006941 44 0.011
cation homeostasis GO:0055080 195 0.011
response to organophosphorus GO:0046683 102 0.011
behavior GO:0007610 205 0.011
metal ion homeostasis GO:0055065 186 0.011
cardiac ventricle development GO:0003231 1 0.011
positive regulation of phosphorylation GO:0042327 177 0.011
axis specification GO:0009798 4 0.011
positive regulation of response to stimulus GO:0048584 285 0.011
response to peptide GO:1901652 292 0.011
positive regulation of gene expression GO:0010628 244 0.011
actin mediated cell contraction GO:0070252 12 0.011
purine containing compound metabolic process GO:0072521 253 0.011
response to mechanical stimulus GO:0009612 134 0.011
regulation of homeostatic process GO:0032844 101 0.011
protein transport GO:0015031 132 0.011
negative regulation of transport GO:0051051 136 0.011
negative regulation of cell development GO:0010721 82 0.011
regulation of ion transport GO:0043269 245 0.011
regulation of growth GO:0040008 105 0.011
sequestering of calcium ion GO:0051208 8 0.011
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.010
muscle contraction GO:0006936 88 0.010
cytoplasmic transport GO:0016482 115 0.010
regulation of programmed cell death GO:0043067 341 0.010
negative regulation of response to stimulus GO:0048585 155 0.010
regulation of kinase activity GO:0043549 117 0.010
negative regulation of metabolic process GO:0009892 331 0.010
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0010880 4 0.010
negative regulation of signaling GO:0023057 157 0.010
positive regulation of biosynthetic process GO:0009891 319 0.010
regulation of protein phosphorylation GO:0001932 183 0.010
energy derivation by oxidation of organic compounds GO:0015980 46 0.010
negative regulation of protein metabolic process GO:0051248 114 0.010
purine ribonucleoside monophosphate metabolic process GO:0009167 84 0.010
response to reactive oxygen species GO:0000302 120 0.010
heart process GO:0003015 57 0.010
sequestering of metal ion GO:0051238 9 0.010
single organism carbohydrate metabolic process GO:0044723 118 0.010
negative regulation of cell death GO:0060548 229 0.010
striated muscle tissue development GO:0014706 58 0.010
anterior posterior pattern specification GO:0009952 1 0.010

Usp13 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.088
musculoskeletal system disease DOID:17 0 0.088
muscular disease DOID:0080000 0 0.050
myopathy DOID:423 0 0.042
muscle tissue disease DOID:66 0 0.042
nervous system disease DOID:863 0 0.022
sensory system disease DOID:0050155 0 0.019
disease of metabolism DOID:0014667 0 0.017
inherited metabolic disorder DOID:655 0 0.016
muscular dystrophy DOID:9884 0 0.014
heart disease DOID:114 0 0.013
cardiomyopathy DOID:0050700 0 0.013
intrinsic cardiomyopathy DOID:0060036 0 0.013
cardiovascular system disease DOID:1287 0 0.013
carbohydrate metabolic disorder DOID:2978 0 0.011
eye and adnexa disease DOID:1492 0 0.010
eye disease DOID:5614 0 0.010