Rattus norvegicus

0 known processes

Sema3f

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3 F

(Aliases: SemaIV)

Sema3f biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
ion transmembrane transport GO:0034220 365 0.073
positive regulation of biosynthetic process GO:0009891 319 0.065
transcription dna templated GO:0006351 377 0.053
rna metabolic process GO:0016070 406 0.052
rna biosynthetic process GO:0032774 380 0.050
tissue development GO:0009888 252 0.049
Zebrafish
positive regulation of multicellular organismal process GO:0051240 387 0.048
carbohydrate derivative metabolic process GO:1901135 346 0.048
intracellular signal transduction GO:0035556 314 0.044
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.043
regulation of nucleic acid templated transcription GO:1903506 380 0.042
transcription from rna polymerase ii promoter GO:0006366 252 0.040
regulation of rna metabolic process GO:0051252 391 0.039
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.039
transmembrane transport GO:0055085 412 0.037
negative regulation of macromolecule metabolic process GO:0010605 260 0.036
organic acid metabolic process GO:0006082 292 0.036
regulation of signal transduction GO:0009966 318 0.036
reproductive process GO:0022414 372 0.035
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.034
nucleic acid templated transcription GO:0097659 379 0.033
macromolecular complex subunit organization GO:0043933 339 0.033
negative regulation of metabolic process GO:0009892 331 0.032
regulation of cell differentiation GO:0045595 320 0.032
response to nutrient levels GO:0031667 370 0.032
regulation of rna biosynthetic process GO:2001141 381 0.032
regulation of cell proliferation GO:0042127 359 0.032
single organism biosynthetic process GO:0044711 342 0.032
negative regulation of cellular biosynthetic process GO:0031327 161 0.032
cellular homeostasis GO:0019725 252 0.031
positive regulation of cellular biosynthetic process GO:0031328 295 0.031
metal ion transport GO:0030001 289 0.031
positive regulation of cell proliferation GO:0008284 249 0.030
negative regulation of gene expression GO:0010629 199 0.030
heart morphogenesis GO:0003007 3 0.030
negative regulation of cell communication GO:0010648 158 0.029
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.029
positive regulation of developmental process GO:0051094 283 0.029
carbohydrate derivative biosynthetic process GO:1901137 124 0.029
regulation of multicellular organismal development GO:2000026 376 0.028
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.028
ribose phosphate metabolic process GO:0019693 235 0.028
nucleobase containing small molecule metabolic process GO:0055086 316 0.028
muscle system process GO:0003012 115 0.027
cellular component biogenesis GO:0044085 368 0.027
regulation of molecular function GO:0065009 398 0.027
positive regulation of transport GO:0051050 245 0.027
neuron differentiation GO:0030182 368 0.027
Human
regulation of transcription dna templated GO:0006355 374 0.027
positive regulation of cell differentiation GO:0045597 217 0.027
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.026
reproduction GO:0000003 245 0.026
purine ribonucleotide metabolic process GO:0009150 227 0.026
negative regulation of cellular metabolic process GO:0031324 281 0.026
cation transport GO:0006812 382 0.026
regulation of cellular component organization GO:0051128 368 0.025
nucleoside phosphate metabolic process GO:0006753 283 0.025
organophosphate metabolic process GO:0019637 370 0.025
central nervous system development GO:0007417 311 0.025
nucleotide metabolic process GO:0009117 279 0.025
organelle organization GO:0006996 266 0.025
single organism organelle organization GO:1902589 180 0.025
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.025
positive regulation of gene expression GO:0010628 244 0.024
regulation of cell development GO:0060284 263 0.024
response to inorganic substance GO:0010035 377 0.024
multicellular organism reproduction GO:0032504 233 0.024
apoptotic process GO:0006915 381 0.023
metal ion homeostasis GO:0055065 186 0.023
protein complex assembly GO:0006461 263 0.023
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.023
g protein coupled receptor signaling pathway GO:0007186 242 0.023
regulation of cellular localization GO:0060341 263 0.023
positive regulation of cellular component organization GO:0051130 200 0.023
negative regulation of transcription dna templated GO:0045892 116 0.023
response to decreased oxygen levels GO:0036293 237 0.023
cellular response to endogenous stimulus GO:0071495 377 0.022
carboxylic acid metabolic process GO:0019752 289 0.022
cellular response to cytokine stimulus GO:0071345 127 0.022
macromolecular complex assembly GO:0065003 273 0.022
protein complex subunit organization GO:0071822 302 0.022
purine nucleotide metabolic process GO:0006163 229 0.022
cellular metal ion homeostasis GO:0006875 172 0.021
single organism catabolic process GO:0044712 283 0.021
regulation of neurogenesis GO:0050767 247 0.021
positive regulation of transcription dna templated GO:0045893 197 0.021
multicellular organismal reproductive process GO:0048609 233 0.021
regulation of cellular amino acid metabolic process GO:0006521 2 0.021
brain development GO:0007420 247 0.021
cell projection organization GO:0030030 302 0.021
Human
regulation of programmed cell death GO:0043067 341 0.021
chemical homeostasis GO:0048878 292 0.021
nucleoside metabolic process GO:0009116 179 0.021
cellular component assembly GO:0022607 360 0.021
negative regulation of biosynthetic process GO:0009890 168 0.021
defense response GO:0006952 194 0.021
negative regulation of transcription from rna polymerase ii promoter GO:0000122 75 0.020
multi organism reproductive process GO:0044703 262 0.020
regulation of fat cell differentiation GO:0045598 3 0.020
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.020
cellular chemical homeostasis GO:0055082 247 0.020
cyclic purine nucleotide metabolic process GO:0052652 62 0.020
cellular amine metabolic process GO:0044106 38 0.020
response to acid chemical GO:0001101 222 0.020
eye morphogenesis GO:0048592 4 0.020
cation homeostasis GO:0055080 195 0.020
negative regulation of rna biosynthetic process GO:1902679 118 0.020
catabolic process GO:0009056 351 0.020
regulation of apoptotic process GO:0042981 335 0.020
cellular divalent inorganic cation homeostasis GO:0072503 162 0.020
homeostatic process GO:0042592 331 0.019
cellular response to oxygen containing compound GO:1901701 386 0.019
response to radiation GO:0009314 137 0.019
purine containing compound metabolic process GO:0072521 253 0.019
cell morphogenesis involved in differentiation GO:0000904 119 0.019
Human
positive regulation of rna biosynthetic process GO:1902680 197 0.019
negative regulation of multicellular organismal process GO:0051241 203 0.019
response to metal ion GO:0010038 253 0.019
programmed cell death GO:0012501 392 0.019
positive regulation of nucleic acid templated transcription GO:1903508 197 0.019
calcium ion homeostasis GO:0055074 162 0.019
carbohydrate derivative catabolic process GO:1901136 147 0.019
muscle structure development GO:0061061 87 0.019
oxoacid metabolic process GO:0043436 290 0.019
ribonucleotide metabolic process GO:0009259 231 0.019
positive regulation of rna metabolic process GO:0051254 203 0.019
anatomical structure morphogenesis GO:0009653 298 0.019
Human
secretion GO:0046903 307 0.018
response to oxygen levels GO:0070482 265 0.018
response to cytokine GO:0034097 215 0.018
cellular ketone metabolic process GO:0042180 51 0.018
regulation of protein metabolic process GO:0051246 289 0.018
ras protein signal transduction GO:0007265 29 0.018
camera type eye development GO:0043010 48 0.018
regulation of stem cell differentiation GO:2000736 2 0.018
cellular response to stress GO:0033554 269 0.018
cytoskeleton organization GO:0007010 111 0.018
positive regulation of response to stimulus GO:0048584 285 0.018
cell cell signaling GO:0007267 335 0.018
ion homeostasis GO:0050801 212 0.017
positive regulation of phosphorus metabolic process GO:0010562 262 0.017
cellular amino acid metabolic process GO:0006520 107 0.017
amine metabolic process GO:0009308 38 0.017
cellular cation homeostasis GO:0030003 180 0.017
positive regulation of cell communication GO:0010647 271 0.017
lipid metabolic process GO:0006629 283 0.017
regulation of hydrolase activity GO:0051336 143 0.017
heterocycle catabolic process GO:0046700 167 0.017
behavior GO:0007610 205 0.017
ribonucleoside metabolic process GO:0009119 174 0.017
regulation of cellular ketone metabolic process GO:0010565 27 0.017
cation transmembrane transport GO:0098655 263 0.017
muscle tissue development GO:0060537 58 0.017
secretion by cell GO:0032940 248 0.017
regulation of membrane potential GO:0042391 110 0.017
protein phosphorylation GO:0006468 345 0.017
sensory organ development GO:0007423 74 0.017
regulation of cellular amine metabolic process GO:0033238 8 0.016
head development GO:0060322 247 0.016
protein complex biogenesis GO:0070271 263 0.016
organonitrogen compound catabolic process GO:1901565 179 0.016
organic substance catabolic process GO:1901575 316 0.016
gastrulation GO:0007369 2 0.016
cellular response to external stimulus GO:0071496 118 0.016
organonitrogen compound biosynthetic process GO:1901566 167 0.016
regulation of anatomical structure morphogenesis GO:0022603 141 0.016
proteolysis GO:0006508 175 0.016
positive regulation of cell development GO:0010720 176 0.016
cellular nitrogen compound catabolic process GO:0044270 163 0.016
cardiovascular system development GO:0072358 134 0.016
regulation of nervous system development GO:0051960 264 0.016
purine ribonucleoside metabolic process GO:0046128 168 0.016
positive regulation of secretion by cell GO:1903532 128 0.016
circulatory system development GO:0072359 134 0.016
ossification GO:0001503 70 0.016
vesicle mediated transport GO:0016192 181 0.016
single organism reproductive process GO:0044702 297 0.015
ribonucleoside triphosphate metabolic process GO:0009199 141 0.015
positive regulation of signaling GO:0023056 270 0.015
cellular calcium ion homeostasis GO:0006874 160 0.015
positive regulation of nucleotide metabolic process GO:0045981 91 0.015
multicellular organism growth GO:0035264 1 0.015
organophosphate biosynthetic process GO:0090407 143 0.015
rhythmic process GO:0048511 156 0.015
growth GO:0040007 165 0.015
small gtpase mediated signal transduction GO:0007264 36 0.015
organic cyclic compound catabolic process GO:1901361 175 0.015
nucleobase containing compound catabolic process GO:0034655 152 0.015
glycosyl compound catabolic process GO:1901658 126 0.015
aging GO:0007568 241 0.015
cellular ion homeostasis GO:0006873 184 0.015
purine nucleoside metabolic process GO:0042278 169 0.015
cellular catabolic process GO:0044248 295 0.015
negative regulation of transport GO:0051051 136 0.015
divalent inorganic cation homeostasis GO:0072507 165 0.015
nucleoside phosphate biosynthetic process GO:1901293 102 0.015
cytosolic calcium ion homeostasis GO:0051480 140 0.015
organophosphate catabolic process GO:0046434 148 0.015
limb morphogenesis GO:0035108 4 0.015
regulation of response to stress GO:0080134 126 0.015
inflammatory response GO:0006954 150 0.015
purine containing compound catabolic process GO:0072523 138 0.015
positive regulation of ion transport GO:0043270 94 0.015
response to growth factor GO:0070848 189 0.015
regulation of phosphate metabolic process GO:0019220 349 0.015
regulation of cell morphogenesis involved in differentiation GO:0010769 72 0.015
sexual reproduction GO:0019953 148 0.015
negative regulation of cell death GO:0060548 229 0.014
negative regulation of nucleic acid templated transcription GO:1903507 117 0.014
cellular response to lipid GO:0071396 201 0.014
carbohydrate metabolic process GO:0005975 130 0.014
cell cycle GO:0007049 101 0.014
retina morphogenesis in camera type eye GO:0060042 1 0.014
cardiac chamber development GO:0003205 1 0.014
embryonic appendage morphogenesis GO:0035113 4 0.014
regulation of secretion by cell GO:1903530 208 0.014
regulation of metal ion transport GO:0010959 118 0.014
regulation of phosphorus metabolic process GO:0051174 349 0.014
actin filament based process GO:0030029 86 0.014
negative regulation of signaling GO:0023057 157 0.014
negative regulation of molecular function GO:0044092 133 0.014
appendage morphogenesis GO:0035107 4 0.014
regulation of ion transport GO:0043269 245 0.014
eye development GO:0001654 50 0.014
glycosyl compound metabolic process GO:1901657 182 0.014
nucleoside triphosphate catabolic process GO:0009143 123 0.014
positive regulation of cell projection organization GO:0031346 111 0.014
cellular response to nitrogen compound GO:1901699 210 0.014
intracellular transport GO:0046907 185 0.014
purine ribonucleotide catabolic process GO:0009154 136 0.014
regulation of system process GO:0044057 208 0.014
nucleoside phosphate catabolic process GO:1901292 140 0.013
protein localization GO:0008104 191 0.013
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.013
nucleoside triphosphate metabolic process GO:0009141 144 0.013
cellular component movement GO:0006928 248 0.013
Human Zebrafish
response to peptide hormone GO:0043434 278 0.013
response to hexose GO:0009746 144 0.013
single organism intracellular transport GO:1902582 166 0.013
response to wounding GO:0009611 254 0.013
neuron development GO:0048666 286 0.013
Human
cell morphogenesis GO:0000902 142 0.013
Human
regulation of neuron differentiation GO:0045664 208 0.013
response to monosaccharide GO:0034284 159 0.013
circulatory system process GO:0003013 183 0.013
neuron projection development GO:0031175 273 0.013
Human
cell growth GO:0016049 104 0.013
response to glucose GO:0009749 136 0.013
positive regulation of biomineral tissue development GO:0070169 4 0.013
heart development GO:0007507 72 0.013
male gamete generation GO:0048232 99 0.013
synaptic transmission GO:0007268 235 0.013
purine nucleoside catabolic process GO:0006152 124 0.013
regulation of transmembrane transport GO:0034762 122 0.013
response to hypoxia GO:0001666 231 0.013
positive regulation of locomotion GO:0040017 102 0.013
regulation of cell projection organization GO:0031344 175 0.013
single organism carbohydrate metabolic process GO:0044723 118 0.013
purine nucleoside triphosphate metabolic process GO:0009144 141 0.013
positive regulation of mesenchymal cell proliferation GO:0002053 4 0.013
purine ribonucleoside catabolic process GO:0046130 124 0.013
positive regulation of apoptotic process GO:0043065 154 0.013
ribonucleoside catabolic process GO:0042454 126 0.013
positive regulation of cytosolic calcium ion concentration GO:0007204 122 0.013
axis specification GO:0009798 4 0.013
negative regulation of protein metabolic process GO:0051248 114 0.012
negative regulation of response to stimulus GO:0048585 155 0.012
camera type eye morphogenesis GO:0048593 2 0.012
positive regulation of neuron differentiation GO:0045666 126 0.012
macromolecule localization GO:0033036 252 0.012
aromatic compound catabolic process GO:0019439 168 0.012
nitrogen compound transport GO:0071705 229 0.012
regulation of secretion GO:0051046 224 0.012
nucleoside catabolic process GO:0009164 126 0.012
positive regulation of molecular function GO:0044093 230 0.012
salivary gland development GO:0007431 3 0.012
muscle cell differentiation GO:0042692 52 0.012
positive regulation of cellular amine metabolic process GO:0033240 3 0.012
lipid biosynthetic process GO:0008610 128 0.012
negative regulation of cardiac muscle tissue development GO:0055026 3 0.012
positive regulation of cell death GO:0010942 184 0.012
protein oligomerization GO:0051259 191 0.012
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.012
cellular macromolecule localization GO:0070727 122 0.012
cell migration GO:0016477 197 0.012
Zebrafish
negative regulation of rna metabolic process GO:0051253 123 0.012
regulation of neuron projection development GO:0010975 161 0.012
bmp signaling pathway GO:0030509 4 0.012
negative regulation of osteoblast differentiation GO:0045668 2 0.012
regulation of ion transmembrane transport GO:0034765 121 0.012
anterior posterior pattern specification GO:0009952 1 0.012
ribose phosphate biosynthetic process GO:0046390 87 0.012
divalent metal ion transport GO:0070838 132 0.012
regulation of homeostatic process GO:0032844 101 0.012
regulation of cytokine production GO:0001817 56 0.012
response to nutrient GO:0007584 248 0.012
regulation of transmembrane transporter activity GO:0022898 49 0.012
response to extracellular stimulus GO:0009991 380 0.012
blood circulation GO:0008015 183 0.012
positive regulation of bone mineralization GO:0030501 4 0.012
negative regulation of apoptotic process GO:0043066 181 0.012
mesenchymal cell proliferation GO:0010463 4 0.012
telencephalon development GO:0021537 62 0.012
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.012
cellular lipid metabolic process GO:0044255 208 0.012
regulation of purine nucleotide metabolic process GO:1900542 115 0.011
cell cell signaling involved in cell fate commitment GO:0045168 2 0.011
response to peptide GO:1901652 292 0.011
striated muscle tissue development GO:0014706 58 0.011
negative regulation of cell differentiation GO:0045596 99 0.011
purine nucleotide catabolic process GO:0006195 136 0.011
cellular protein localization GO:0034613 122 0.011
ribonucleoside triphosphate catabolic process GO:0009203 122 0.011
inorganic cation transmembrane transport GO:0098662 202 0.011
regulation of hormone levels GO:0010817 187 0.011
regulation of canonical wnt signaling pathway GO:0060828 4 0.011
embryonic limb morphogenesis GO:0030326 4 0.011
positive regulation of phosphate metabolic process GO:0045937 262 0.011
response to mechanical stimulus GO:0009612 134 0.011
divalent inorganic cation transport GO:0072511 134 0.011
rho protein signal transduction GO:0007266 11 0.011
regulation of ossification GO:0030278 32 0.011
immune system process GO:0002376 204 0.011
regulation of cellular component movement GO:0051270 150 0.011
regulation of phosphorylation GO:0042325 248 0.011
embryonic pattern specification GO:0009880 1 0.011
retina development in camera type eye GO:0060041 27 0.011
purine containing compound biosynthetic process GO:0072522 85 0.011
negative regulation of phosphorus metabolic process GO:0010563 80 0.011
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.011
regulation of muscle system process GO:0090257 79 0.011
monovalent inorganic cation transport GO:0015672 172 0.010
negative regulation of programmed cell death GO:0043069 183 0.010
regulation of smooth muscle cell proliferation GO:0048660 75 0.010
negative regulation of signal transduction GO:0009968 83 0.010
regulation of anatomical structure size GO:0090066 135 0.010
positive regulation of signal transduction GO:0009967 175 0.010
regulation of cellular protein metabolic process GO:0032268 267 0.010
response to other organism GO:0051707 220 0.010
positive regulation of nervous system development GO:0051962 178 0.010
nucleotide biosynthetic process GO:0009165 98 0.010
cell motility GO:0048870 202 0.010
Zebrafish
forebrain development GO:0030900 98 0.010
spermatogenesis GO:0007283 99 0.010
ribonucleotide biosynthetic process GO:0009260 85 0.010
locomotion GO:0040011 237 0.010
Human Zebrafish
anatomical structure formation involved in morphogenesis GO:0048646 83 0.010
response to oxidative stress GO:0006979 186 0.010
cellular response to abiotic stimulus GO:0071214 85 0.010
cytoplasmic transport GO:0016482 115 0.010
regulation of growth GO:0040008 105 0.010
cyclic nucleotide biosynthetic process GO:0009190 63 0.010
synaptic growth at neuromuscular junction GO:0051124 1 0.010
response to ethanol GO:0045471 162 0.010

Sema3f disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
sensory system disease DOID:0050155 0 0.024
disease of anatomical entity DOID:7 0 0.024
nervous system disease DOID:863 0 0.024
musculoskeletal system disease DOID:17 0 0.018
eye and adnexa disease DOID:1492 0 0.013
eye disease DOID:5614 0 0.011