Rattus norvegicus

0 known processes

Shroom1

shroom family member 1

(Aliases: RGD1308066)

Shroom1 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
regulation of nucleic acid templated transcription GO:1903506 380 0.164
response to extracellular stimulus GO:0009991 380 0.093
nucleic acid templated transcription GO:0097659 379 0.087
transcription dna templated GO:0006351 377 0.086
response to external biotic stimulus GO:0043207 221 0.078
response to biotic stimulus GO:0009607 226 0.069
transmembrane transport GO:0055085 412 0.066
regulation of cell proliferation GO:0042127 359 0.065
regulation of molecular function GO:0065009 398 0.060
negative regulation of macromolecule metabolic process GO:0010605 260 0.059
response to nutrient levels GO:0031667 370 0.058
negative regulation of biosynthetic process GO:0009890 168 0.057
organonitrogen compound biosynthetic process GO:1901566 167 0.056
cellular response to oxygen containing compound GO:1901701 386 0.054
apoptotic process GO:0006915 381 0.054
rna biosynthetic process GO:0032774 380 0.054
regulation of cellular component organization GO:0051128 368 0.052
negative regulation of metabolic process GO:0009892 331 0.050
response to monosaccharide GO:0034284 159 0.050
response to hypoxia GO:0001666 231 0.049
regulation of cell differentiation GO:0045595 320 0.049
negative regulation of cellular biosynthetic process GO:0031327 161 0.048
nucleobase containing small molecule metabolic process GO:0055086 316 0.048
cellular response to lipid GO:0071396 201 0.048
ion transmembrane transport GO:0034220 365 0.047
response to decreased oxygen levels GO:0036293 237 0.046
regulation of rna biosynthetic process GO:2001141 381 0.046
cellular component movement GO:0006928 248 0.046
homeostatic process GO:0042592 331 0.044
regulation of programmed cell death GO:0043067 341 0.044
response to carbohydrate GO:0009743 183 0.044
immune system process GO:0002376 204 0.043
cellular response to stress GO:0033554 269 0.042
neuron death GO:0070997 127 0.041
response to lipopolysaccharide GO:0032496 191 0.041
ribonucleotide metabolic process GO:0009259 231 0.040
response to corticosteroid GO:0031960 235 0.040
cellular homeostasis GO:0019725 252 0.039
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.039
response to glucocorticoid GO:0051384 223 0.039
positive regulation of gene expression GO:0010628 244 0.038
intracellular signal transduction GO:0035556 314 0.037
head development GO:0060322 247 0.037
positive regulation of cell proliferation GO:0008284 249 0.036
regulation of system process GO:0044057 208 0.036
cellular amino acid metabolic process GO:0006520 107 0.036
localization of cell GO:0051674 202 0.036
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.036
negative regulation of gene expression GO:0010629 199 0.035
positive regulation of phosphorylation GO:0042327 177 0.034
regulation of metal ion transport GO:0010959 118 0.034
positive regulation of cellular component movement GO:0051272 102 0.034
regulation of protein metabolic process GO:0051246 289 0.033
cell migration GO:0016477 197 0.033
transcription from rna polymerase ii promoter GO:0006366 252 0.033
positive regulation of cell migration GO:0030335 96 0.033
secretion GO:0046903 307 0.033
regulation of catalytic activity GO:0050790 304 0.032
macromolecule localization GO:0033036 252 0.032
regulation of cell development GO:0060284 263 0.032
carboxylic acid metabolic process GO:0019752 289 0.032
negative regulation of cell proliferation GO:0008285 119 0.032
response to oxidative stress GO:0006979 186 0.032
single organism catabolic process GO:0044712 283 0.032
purine containing compound metabolic process GO:0072521 253 0.031
metanephric comma shaped body morphogenesis GO:0072278 2 0.031
negative regulation of cellular metabolic process GO:0031324 281 0.031
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.031
regulation of cellular amino acid metabolic process GO:0006521 2 0.030
response to peptide GO:1901652 292 0.030
regulation of rna metabolic process GO:0051252 391 0.030
rna metabolic process GO:0016070 406 0.030
cation transport GO:0006812 382 0.030
carbohydrate derivative metabolic process GO:1901135 346 0.029
regulation of protein kinase activity GO:0045859 105 0.029
regulation of membrane potential GO:0042391 110 0.029
protein complex biogenesis GO:0070271 263 0.029
regulation of kinase activity GO:0043549 117 0.029
cellular response to endogenous stimulus GO:0071495 377 0.029
positive regulation of cell death GO:0010942 184 0.028
response to cytokine GO:0034097 215 0.028
response to glucose GO:0009749 136 0.028
regulation of transcription dna templated GO:0006355 374 0.028
positive regulation of cell differentiation GO:0045597 217 0.028
response to oxygen levels GO:0070482 265 0.028
positive regulation of locomotion GO:0040017 102 0.027
locomotion GO:0040011 237 0.027
cytosolic calcium ion homeostasis GO:0051480 140 0.027
response to light stimulus GO:0009416 52 0.027
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.026
kidney morphogenesis GO:0060993 13 0.026
response to radiation GO:0009314 137 0.026
regulation of cell migration GO:0030334 128 0.026
regulation of neuron death GO:1901214 115 0.025
cellular response to external stimulus GO:0071496 118 0.025
positive regulation of developmental process GO:0051094 283 0.025
negative regulation of nucleic acid templated transcription GO:1903507 117 0.025
synaptic growth at neuromuscular junction GO:0051124 1 0.025
regulation of cell motility GO:2000145 131 0.025
negative regulation of transcription dna templated GO:0045892 116 0.025
single organism membrane organization GO:0044802 74 0.025
response to heat GO:0009408 60 0.025
positive regulation of biosynthetic process GO:0009891 319 0.025
regulation of cell projection organization GO:0031344 175 0.025
nucleoside phosphate metabolic process GO:0006753 283 0.025
regulation of neuron apoptotic process GO:0043523 83 0.025
response to estrogen GO:0043627 232 0.024
response to growth factor GO:0070848 189 0.024
dendrite development GO:0016358 72 0.024
chemical homeostasis GO:0048878 292 0.024
brain development GO:0007420 247 0.024
oxidation reduction process GO:0055114 304 0.023
regulation of neurogenesis GO:0050767 247 0.023
organophosphate metabolic process GO:0019637 370 0.023
peptidyl amino acid modification GO:0018193 126 0.023
positive regulation of cellular component organization GO:0051130 200 0.023
nucleotide metabolic process GO:0009117 279 0.023
cellular chemical homeostasis GO:0055082 247 0.023
protein phosphorylation GO:0006468 345 0.023
establishment of protein localization GO:0045184 141 0.023
monosaccharide metabolic process GO:0005996 61 0.022
positive regulation of catalytic activity GO:0043085 184 0.022
regulation of multicellular organismal development GO:2000026 376 0.022
central nervous system development GO:0007417 311 0.022
positive regulation of cell development GO:0010720 176 0.022
positive regulation of cell motility GO:2000147 97 0.022
response to molecule of bacterial origin GO:0002237 194 0.022
negative regulation of rna metabolic process GO:0051253 123 0.022
anion transport GO:0006820 178 0.022
response to ketone GO:1901654 182 0.022
response to toxic substance GO:0009636 133 0.022
axis specification GO:0009798 4 0.022
regulation of transferase activity GO:0051338 123 0.021
lipid metabolic process GO:0006629 283 0.021
response to hexose GO:0009746 144 0.021
ribose phosphate metabolic process GO:0019693 235 0.021
response to other organism GO:0051707 220 0.021
appendage morphogenesis GO:0035107 4 0.021
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.021
single organism reproductive process GO:0044702 297 0.020
regulation of signal transduction GO:0009966 318 0.020
regeneration GO:0031099 163 0.020
cellular response to alcohol GO:0097306 87 0.020
cell motility GO:0048870 202 0.020
response to estradiol GO:0032355 164 0.020
negative regulation of protein metabolic process GO:0051248 114 0.020
regulation of cellular amine metabolic process GO:0033238 8 0.020
regulation of apoptotic process GO:0042981 335 0.020
purine ribonucleotide metabolic process GO:0009150 227 0.020
positive regulation of rna metabolic process GO:0051254 203 0.020
regulation of cellular ketone metabolic process GO:0010565 27 0.020
positive regulation of programmed cell death GO:0043068 157 0.020
regulation of phosphate metabolic process GO:0019220 349 0.020
anatomical structure morphogenesis GO:0009653 298 0.019
Mouse
hormone secretion GO:0046879 115 0.019
oxoacid metabolic process GO:0043436 290 0.019
cellular response to growth factor stimulus GO:0071363 162 0.019
response to acid chemical GO:0001101 222 0.019
negative regulation of cell death GO:0060548 229 0.019
cellular amine metabolic process GO:0044106 38 0.019
positive regulation of nervous system development GO:0051962 178 0.018
positive regulation of protein modification process GO:0031401 142 0.018
vesicle mediated transport GO:0016192 181 0.018
positive regulation of immune system process GO:0002684 90 0.018
amine metabolic process GO:0009308 38 0.018
hormone metabolic process GO:0042445 69 0.018
cellular response to nitrogen compound GO:1901699 210 0.018
regulation of phosphorus metabolic process GO:0051174 349 0.018
carboxylic acid transport GO:0046942 115 0.018
negative regulation of developmental process GO:0051093 125 0.018
regulation of immune system process GO:0002682 123 0.018
positive regulation of multicellular organismal process GO:0051240 387 0.018
epithelial cell proliferation GO:0050673 54 0.017
membrane organization GO:0061024 94 0.017
neurological system process GO:0050877 219 0.017
neuron projection development GO:0031175 273 0.017
purine nucleoside catabolic process GO:0006152 124 0.017
cellular component assembly GO:0022607 360 0.017
Mouse
purine containing compound catabolic process GO:0072523 138 0.017
regulation of nervous system development GO:0051960 264 0.017
response to starvation GO:0042594 59 0.017
negative regulation of cell communication GO:0010648 158 0.017
hexose metabolic process GO:0019318 58 0.017
cellular response to organonitrogen compound GO:0071417 197 0.017
regulation of neuron differentiation GO:0045664 208 0.017
positive regulation of transcription dna templated GO:0045893 197 0.017
cellular metal ion homeostasis GO:0006875 172 0.016
positive regulation of phosphate metabolic process GO:0045937 262 0.016
protein localization GO:0008104 191 0.016
lipid storage GO:0019915 1 0.016
programmed cell death GO:0012501 392 0.016
positive regulation of apoptotic process GO:0043065 154 0.016
regulation of phosphorylation GO:0042325 248 0.016
cellular response to hormone stimulus GO:0032870 247 0.016
purine ribonucleoside catabolic process GO:0046130 124 0.016
defense response GO:0006952 194 0.016
glucose metabolic process GO:0006006 52 0.016
negative regulation of multicellular organismal process GO:0051241 203 0.016
kidney development GO:0001822 67 0.016
purine nucleotide metabolic process GO:0006163 229 0.016
regulation of cell morphogenesis involved in differentiation GO:0010769 72 0.016
cellular calcium ion homeostasis GO:0006874 160 0.016
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.016
positive regulation of protein phosphorylation GO:0001934 135 0.016
inorganic ion transmembrane transport GO:0098660 229 0.016
single organism biosynthetic process GO:0044711 342 0.015
cellular component morphogenesis GO:0032989 155 0.015
Mouse
negative regulation of transport GO:0051051 136 0.015
positive regulation of rna biosynthetic process GO:1902680 197 0.015
regulation of ion transport GO:0043269 245 0.015
metal ion homeostasis GO:0055065 186 0.015
positive regulation of signaling GO:0023056 270 0.015
histone h3 acetylation GO:0043966 2 0.015
wound healing GO:0042060 122 0.015
glycosyl compound metabolic process GO:1901657 182 0.015
intracellular transport GO:0046907 185 0.015
forebrain development GO:0030900 98 0.015
negative regulation of rna biosynthetic process GO:1902679 118 0.015
single organism organelle organization GO:1902589 180 0.015
Mouse
regulation of cellular localization GO:0060341 263 0.015
neuron apoptotic process GO:0051402 88 0.015
regulation of intracellular signal transduction GO:1902531 218 0.015
cellular component biogenesis GO:0044085 368 0.015
Mouse
cell morphogenesis involved in differentiation GO:0000904 119 0.014
positive regulation of cellular protein metabolic process GO:0032270 167 0.014
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.014
regulation of nucleotide metabolic process GO:0006140 117 0.014
organelle organization GO:0006996 266 0.014
Mouse
response to retinoic acid GO:0032526 63 0.014
organonitrogen compound catabolic process GO:1901565 179 0.014
cellular cation homeostasis GO:0030003 180 0.014
organic acid metabolic process GO:0006082 292 0.014
regulation of neuron projection development GO:0010975 161 0.014
reproductive process GO:0022414 372 0.014
positive regulation of response to stimulus GO:0048584 285 0.014
purine nucleotide biosynthetic process GO:0006164 83 0.014
positive regulation of molecular function GO:0044093 230 0.014
cranial suture morphogenesis GO:0060363 4 0.014
regulation of hormone levels GO:0010817 187 0.014
regulation of fat cell differentiation GO:0045598 3 0.014
ribonucleoside triphosphate metabolic process GO:0009199 141 0.014
cellular catabolic process GO:0044248 295 0.014
axon development GO:0061564 96 0.014
cellular macromolecule localization GO:0070727 122 0.014
response to vitamin GO:0033273 131 0.014
regulation of cellular protein metabolic process GO:0032268 267 0.013
negative regulation of cell development GO:0010721 82 0.013
regulation of cell morphogenesis GO:0022604 77 0.013
gland development GO:0048732 155 0.013
ribonucleoside metabolic process GO:0009119 174 0.013
single organism cellular localization GO:1902580 102 0.013
regulation of hydrolase activity GO:0051336 143 0.013
protein maturation GO:0051604 68 0.013
cellular response to organic cyclic compound GO:0071407 202 0.013
positive regulation of phosphorus metabolic process GO:0010562 262 0.013
protein transport GO:0015031 132 0.013
ion homeostasis GO:0050801 212 0.013
organophosphate catabolic process GO:0046434 148 0.013
positive regulation of protein metabolic process GO:0051247 178 0.013
maintenance of location GO:0051235 17 0.013
multicellular organismal reproductive process GO:0048609 233 0.013
positive regulation of neurogenesis GO:0050769 165 0.013
positive regulation of nucleic acid templated transcription GO:1903508 197 0.013
positive regulation of cellular amine metabolic process GO:0033240 3 0.013
rhythmic process GO:0048511 156 0.013
purine nucleoside metabolic process GO:0042278 169 0.012
organic substance catabolic process GO:1901575 316 0.012
peptide metabolic process GO:0006518 32 0.012
nucleoside metabolic process GO:0009116 179 0.012
sorbitol biosynthetic process GO:0006061 1 0.012
purine nucleotide catabolic process GO:0006195 136 0.012
response to electrical stimulus GO:0051602 56 0.012
cerebellar purkinje cell layer morphogenesis GO:0021692 1 0.012
limbic system development GO:0021761 38 0.012
endocytosis GO:0006897 84 0.012
anterior posterior pattern specification GO:0009952 1 0.012
cellular response to nutrient levels GO:0031669 60 0.012
positive regulation of cell projection organization GO:0031346 111 0.012
purine nucleoside triphosphate catabolic process GO:0009146 122 0.012
response to mechanical stimulus GO:0009612 134 0.012
positive regulation of cellular biosynthetic process GO:0031328 295 0.012
regulation of locomotion GO:0040012 148 0.012
leukocyte activation GO:0045321 76 0.012
response to bacterium GO:0009617 200 0.012
peptidyl tyrosine phosphorylation GO:0018108 72 0.012
positive regulation of catabolic process GO:0009896 78 0.012
urogenital system development GO:0001655 78 0.012
aromatic compound catabolic process GO:0019439 168 0.012
ensheathment of neurons GO:0007272 40 0.012
negative regulation of programmed cell death GO:0043069 183 0.012
activation of protein kinase activity GO:0032147 47 0.011
organic acid catabolic process GO:0016054 49 0.011
muscle contraction GO:0006936 88 0.011
positive regulation of cytosolic calcium ion concentration GO:0007204 122 0.011
cell cycle GO:0007049 101 0.011
cellular response to extracellular stimulus GO:0031668 73 0.011
response to nutrient GO:0007584 248 0.011
response to alkaloid GO:0043279 132 0.011
multicellular organism reproduction GO:0032504 233 0.011
reproduction GO:0000003 245 0.011
negative regulation of neuron death GO:1901215 69 0.011
nucleotide biosynthetic process GO:0009165 98 0.011
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.011
positive regulation of transferase activity GO:0051347 81 0.011
protein processing GO:0016485 68 0.011
positive regulation of ras gtpase activity GO:0032320 28 0.011
lipid localization GO:0010876 62 0.011
cellular response to oxygen levels GO:0071453 60 0.011
defense response to gram negative bacterium GO:0050829 3 0.011
single organism intracellular transport GO:1902582 166 0.011
thioester metabolic process GO:0035383 28 0.011
camera type eye development GO:0043010 48 0.011
regulation of protein modification process GO:0031399 194 0.011
cell type specific apoptotic process GO:0097285 134 0.011
neuron differentiation GO:0030182 368 0.011
positive regulation of neuron differentiation GO:0045666 126 0.011
carbohydrate metabolic process GO:0005975 130 0.011
organ regeneration GO:0031100 101 0.011
generation of precursor metabolites and energy GO:0006091 62 0.011
metal ion transport GO:0030001 289 0.011
nucleoside catabolic process GO:0009164 126 0.011
embryonic axis specification GO:0000578 1 0.011
response to peptide hormone GO:0043434 278 0.011
endomembrane system organization GO:0010256 48 0.011
regulation of cellular component movement GO:0051270 150 0.011
response to axon injury GO:0048678 59 0.011
cytoplasmic transport GO:0016482 115 0.011
formation of primary germ layer GO:0001704 1 0.011
embryonic pattern specification GO:0009880 1 0.011
organic anion transport GO:0015711 132 0.011
myelination GO:0042552 39 0.011
tube formation GO:0035148 3 0.011
energy derivation by oxidation of organic compounds GO:0015980 46 0.011
regulation of anatomical structure morphogenesis GO:0022603 141 0.011
nucleoside triphosphate catabolic process GO:0009143 123 0.011
protein complex subunit organization GO:0071822 302 0.011
Mouse
axon ensheathment GO:0008366 40 0.010
response to purine containing compound GO:0014074 126 0.010
cellular protein localization GO:0034613 122 0.010
signal release GO:0023061 145 0.010
carboxylic acid catabolic process GO:0046395 49 0.010
embryonic skeletal system morphogenesis GO:0048704 3 0.010
macromolecular complex assembly GO:0065003 273 0.010
molting cycle GO:0042303 3 0.010
positive regulation of cell communication GO:0010647 271 0.010
positive regulation of mapk cascade GO:0043410 92 0.010
positive regulation of transport GO:0051050 245 0.010
negative regulation of catalytic activity GO:0043086 103 0.010
nucleotide catabolic process GO:0009166 139 0.010

Shroom1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.035
cardiovascular system disease DOID:1287 0 0.035
disease of cellular proliferation DOID:14566 0 0.021
vascular disease DOID:178 0 0.019
cancer DOID:162 0 0.013
organ system cancer DOID:0050686 0 0.013