Rattus norvegicus

0 known processes

Pdlim2

PDZ and LIM domain 2

(Aliases: MGC94060)

Pdlim2 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of protein metabolic process GO:0051246 289 0.120
positive regulation of response to stimulus GO:0048584 285 0.113
apoptotic process GO:0006915 381 0.107
programmed cell death GO:0012501 392 0.101
rna biosynthetic process GO:0032774 380 0.100
aging GO:0007568 241 0.082
immune system process GO:0002376 204 0.081
head development GO:0060322 247 0.074
rna metabolic process GO:0016070 406 0.065
intracellular signal transduction GO:0035556 314 0.062
regulation of apoptotic process GO:0042981 335 0.062
transcription dna templated GO:0006351 377 0.062
protein phosphorylation GO:0006468 345 0.061
cellular component assembly GO:0022607 360 0.059
Rat Fly
response to extracellular stimulus GO:0009991 380 0.056
single organism reproductive process GO:0044702 297 0.056
central nervous system development GO:0007417 311 0.056
regulation of signal transduction GO:0009966 318 0.055
protein complex subunit organization GO:0071822 302 0.054
positive regulation of protein metabolic process GO:0051247 178 0.054
transcription from rna polymerase ii promoter GO:0006366 252 0.054
cellular component biogenesis GO:0044085 368 0.053
Rat Fly
anatomical structure morphogenesis GO:0009653 298 0.050
Rat Fly
regulation of rna biosynthetic process GO:2001141 381 0.050
reproductive process GO:0022414 372 0.049
response to biotic stimulus GO:0009607 226 0.048
positive regulation of cellular protein metabolic process GO:0032270 167 0.047
macromolecular complex subunit organization GO:0043933 339 0.047
inflammatory response GO:0006954 150 0.046
regulation of programmed cell death GO:0043067 341 0.046
negative regulation of cellular metabolic process GO:0031324 281 0.046
regulation of molecular function GO:0065009 398 0.044
positive regulation of phosphorus metabolic process GO:0010562 262 0.044
catabolic process GO:0009056 351 0.043
organic acid metabolic process GO:0006082 292 0.043
regulation of catalytic activity GO:0050790 304 0.043
nucleic acid templated transcription GO:0097659 379 0.042
nucleoside phosphate metabolic process GO:0006753 283 0.042
positive regulation of gene expression GO:0010628 244 0.041
brain development GO:0007420 247 0.040
regulation of cellular protein metabolic process GO:0032268 267 0.039
chemical homeostasis GO:0048878 292 0.039
secretion GO:0046903 307 0.037
positive regulation of transport GO:0051050 245 0.036
regulation of nucleic acid templated transcription GO:1903506 380 0.036
vesicle mediated transport GO:0016192 181 0.036
regulation of phosphate metabolic process GO:0019220 349 0.036
response to molecule of bacterial origin GO:0002237 194 0.036
growth GO:0040007 165 0.036
organelle organization GO:0006996 266 0.034
Fly
neuron development GO:0048666 286 0.034
Rat
response to toxic substance GO:0009636 133 0.033
regulation of defense response GO:0031347 68 0.033
negative regulation of rna biosynthetic process GO:1902679 118 0.033
negative regulation of metabolic process GO:0009892 331 0.033
regulation of protein modification process GO:0031399 194 0.033
regulation of phosphorylation GO:0042325 248 0.033
response to antibiotic GO:0046677 39 0.032
cellular response to stress GO:0033554 269 0.032
protein complex assembly GO:0006461 263 0.032
regulation of multicellular organismal development GO:2000026 376 0.031
Rat
negative regulation of programmed cell death GO:0043069 183 0.031
negative regulation of multicellular organismal process GO:0051241 203 0.031
single organism organelle organization GO:1902589 180 0.031
Fly
defense response GO:0006952 194 0.031
response to inorganic substance GO:0010035 377 0.031
carbohydrate derivative metabolic process GO:1901135 346 0.030
intracellular transport GO:0046907 185 0.030
organic substance catabolic process GO:1901575 316 0.030
positive regulation of transcription dna templated GO:0045893 197 0.030
nucleobase containing small molecule metabolic process GO:0055086 316 0.030
regulation of protein kinase activity GO:0045859 105 0.030
negative regulation of cell death GO:0060548 229 0.029
positive regulation of phosphate metabolic process GO:0045937 262 0.028
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.028
response to other organism GO:0051707 220 0.028
protein oligomerization GO:0051259 191 0.028
response to bacterium GO:0009617 200 0.028
regulation of response to stress GO:0080134 126 0.028
protein complex biogenesis GO:0070271 263 0.027
regulation of rna metabolic process GO:0051252 391 0.027
multicellular organism growth GO:0035264 1 0.026
regulation of phosphorus metabolic process GO:0051174 349 0.026
positive regulation of phosphorylation GO:0042327 177 0.026
carbohydrate derivative catabolic process GO:1901136 147 0.026
gliogenesis GO:0042063 93 0.026
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.026
nucleotide metabolic process GO:0009117 279 0.026
homeostatic process GO:0042592 331 0.025
glycosyl compound metabolic process GO:1901657 182 0.025
calcium ion transport GO:0006816 131 0.025
regulation of response to external stimulus GO:0032101 106 0.025
cellular catabolic process GO:0044248 295 0.024
regulation of protein phosphorylation GO:0001932 183 0.024
cellular amino acid metabolic process GO:0006520 107 0.024
purine containing compound metabolic process GO:0072521 253 0.024
positive regulation of multicellular organismal process GO:0051240 387 0.024
Rat
negative regulation of gene expression GO:0010629 199 0.024
negative regulation of macromolecule metabolic process GO:0010605 260 0.024
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.024
organonitrogen compound catabolic process GO:1901565 179 0.023
oxoacid metabolic process GO:0043436 290 0.023
positive regulation of protein phosphorylation GO:0001934 135 0.023
neuron differentiation GO:0030182 368 0.023
Rat
blood circulation GO:0008015 183 0.023
gonad development GO:0008406 104 0.023
positive regulation of molecular function GO:0044093 230 0.023
positive regulation of signal transduction GO:0009967 175 0.022
response to peptide hormone GO:0043434 278 0.022
amine metabolic process GO:0009308 38 0.022
developmental growth GO:0048589 100 0.022
single organism biosynthetic process GO:0044711 342 0.022
reproductive system development GO:0061458 128 0.022
positive regulation of programmed cell death GO:0043068 157 0.022
positive regulation of nucleic acid templated transcription GO:1903508 197 0.022
nucleobase containing compound catabolic process GO:0034655 152 0.022
positive regulation of signaling GO:0023056 270 0.022
hormone transport GO:0009914 121 0.022
regulation of membrane potential GO:0042391 110 0.021
purine ribonucleoside metabolic process GO:0046128 168 0.021
wound healing GO:0042060 122 0.021
cell adhesion GO:0007155 110 0.021
Fly
macromolecular complex assembly GO:0065003 273 0.021
positive regulation of biosynthetic process GO:0009891 319 0.021
positive regulation of developmental process GO:0051094 283 0.021
Rat
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.021
regulation of cell proliferation GO:0042127 359 0.021
response to external biotic stimulus GO:0043207 221 0.021
multi organism reproductive process GO:0044703 262 0.021
positive regulation of cellular biosynthetic process GO:0031328 295 0.020
regulation of transcription dna templated GO:0006355 374 0.020
cell projection organization GO:0030030 302 0.020
Rat
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.020
cellular component movement GO:0006928 248 0.020
cellular nitrogen compound catabolic process GO:0044270 163 0.020
positive regulation of cell death GO:0010942 184 0.020
regulation of cell differentiation GO:0045595 320 0.020
Rat
urogenital system development GO:0001655 78 0.020
glycosyl compound catabolic process GO:1901658 126 0.020
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.020
cellular response to oxygen containing compound GO:1901701 386 0.020
negative regulation of rna metabolic process GO:0051253 123 0.020
purine nucleoside metabolic process GO:0042278 169 0.020
positive regulation of protein modification process GO:0031401 142 0.019
epithelium development GO:0060429 96 0.019
response to growth factor GO:0070848 189 0.019
gland development GO:0048732 155 0.018
single organism intracellular transport GO:1902582 166 0.018
organonitrogen compound biosynthetic process GO:1901566 167 0.018
actin filament based process GO:0030029 86 0.018
Fly
organophosphate catabolic process GO:0046434 148 0.018
forebrain development GO:0030900 98 0.018
respiratory system development GO:0060541 45 0.018
cellular amine metabolic process GO:0044106 38 0.018
immune response GO:0006955 104 0.018
neurological system process GO:0050877 219 0.018
positive regulation of apoptotic process GO:0043065 154 0.018
response to oxygen levels GO:0070482 265 0.018
Rat
protein heterooligomerization GO:0051291 89 0.018
nucleoside metabolic process GO:0009116 179 0.018
regulation of innate immune response GO:0045088 15 0.018
positive regulation of secretion GO:0051047 140 0.018
regulation of growth GO:0040008 105 0.018
regulation of body fluid levels GO:0050878 90 0.018
response to hexose GO:0009746 144 0.017
regulation of vesicle mediated transport GO:0060627 81 0.017
positive regulation of cellular component organization GO:0051130 200 0.017
organic cyclic compound catabolic process GO:1901361 175 0.017
purine ribonucleotide catabolic process GO:0009154 136 0.017
ribonucleoside triphosphate metabolic process GO:0009199 141 0.017
ribose phosphate metabolic process GO:0019693 235 0.017
cytokine production GO:0001816 61 0.017
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.017
regulation of locomotion GO:0040012 148 0.017
developmental process involved in reproduction GO:0003006 159 0.016
regulation of cell growth GO:0001558 85 0.016
carboxylic acid metabolic process GO:0019752 289 0.016
regulation of transferase activity GO:0051338 123 0.016
multicellular organismal reproductive process GO:0048609 233 0.016
muscle structure development GO:0061061 87 0.016
Fly
cellular lipid metabolic process GO:0044255 208 0.016
metal ion transport GO:0030001 289 0.016
biological adhesion GO:0022610 110 0.016
Fly
regulation of kinase activity GO:0043549 117 0.016
single organism catabolic process GO:0044712 283 0.016
positive regulation of intracellular signal transduction GO:1902533 138 0.016
cellular response to endogenous stimulus GO:0071495 377 0.016
cellular ketone metabolic process GO:0042180 51 0.016
ribonucleoside metabolic process GO:0009119 174 0.015
positive regulation of catalytic activity GO:0043085 184 0.015
regulation of cellular amino acid metabolic process GO:0006521 2 0.015
organophosphate metabolic process GO:0019637 370 0.015
nucleotide catabolic process GO:0009166 139 0.015
cell motility GO:0048870 202 0.015
response to wounding GO:0009611 254 0.015
response to lipopolysaccharide GO:0032496 191 0.015
macromolecule localization GO:0033036 252 0.015
negative regulation of apoptotic process GO:0043066 181 0.015
response to hypoxia GO:0001666 231 0.014
Rat
tissue development GO:0009888 252 0.014
negative regulation of organ growth GO:0046621 3 0.014
reproduction GO:0000003 245 0.014
regulation of cellular amine metabolic process GO:0033238 8 0.014
purine ribonucleotide metabolic process GO:0009150 227 0.014
tube development GO:0035295 89 0.014
response to acid chemical GO:0001101 222 0.014
cytoplasmic transport GO:0016482 115 0.014
neuronal action potential GO:0019228 35 0.014
positive regulation of skeletal muscle tissue regeneration GO:0043415 1 0.014
regulation of cell motility GO:2000145 131 0.014
response to radiation GO:0009314 137 0.014
positive regulation of cell proliferation GO:0008284 249 0.014
regulation of response to wounding GO:1903034 69 0.014
regulation of catabolic process GO:0009894 113 0.014
regulation of cellular ketone metabolic process GO:0010565 27 0.014
protein localization GO:0008104 191 0.014
transforming growth factor beta receptor complex assembly GO:0007181 2 0.014
axis specification GO:0009798 4 0.014
negative regulation of transcription from rna polymerase ii promoter GO:0000122 75 0.014
regulation of cytokine production GO:0001817 56 0.014
proteolysis GO:0006508 175 0.014
cell activation GO:0001775 97 0.014
epiboly GO:0090504 2 0.013
divalent inorganic cation transport GO:0072511 134 0.013
endocytosis GO:0006897 84 0.013
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.013
action potential GO:0001508 54 0.013
positive regulation of cell differentiation GO:0045597 217 0.013
Rat
cell migration GO:0016477 197 0.013
heterocycle catabolic process GO:0046700 167 0.013
protein homooligomerization GO:0051260 91 0.013
cell morphogenesis GO:0000902 142 0.013
Rat
transmission of nerve impulse GO:0019226 42 0.013
gamete generation GO:0007276 124 0.013
organic hydroxy compound metabolic process GO:1901615 115 0.013
cytoskeleton organization GO:0007010 111 0.013
Fly
purine nucleoside catabolic process GO:0006152 124 0.013
regulation of secretion GO:0051046 224 0.013
divalent metal ion transport GO:0070838 132 0.013
regulation of skeletal muscle tissue regeneration GO:0043416 2 0.013
negative regulation of innate immune response GO:0045824 4 0.013
positive regulation of secretion by cell GO:1903532 128 0.013
multicellular organism reproduction GO:0032504 233 0.013
response to ethanol GO:0045471 162 0.012
reproductive structure development GO:0048608 128 0.012
liver development GO:0001889 90 0.012
hormone secretion GO:0046879 115 0.012
regulation of cell development GO:0060284 263 0.012
Rat
negative regulation of cellular biosynthetic process GO:0031327 161 0.012
nonribosomal peptide biosynthetic process GO:0019184 3 0.012
positive regulation of rna metabolic process GO:0051254 203 0.012
cell cycle GO:0007049 101 0.012
regulation of hydrolase activity GO:0051336 143 0.012
negative regulation of response to stimulus GO:0048585 155 0.012
regulation of bmp signaling pathway GO:0030510 2 0.012
regulation of nervous system development GO:0051960 264 0.012
Rat
cellular homeostasis GO:0019725 252 0.012
response to monosaccharide GO:0034284 159 0.012
regulation of secretion by cell GO:1903530 208 0.012
ribonucleotide catabolic process GO:0009261 136 0.012
regulation of immune system process GO:0002682 123 0.012
localization of cell GO:0051674 202 0.012
nucleoside phosphate catabolic process GO:1901292 140 0.012
protein maturation GO:0051604 68 0.012
response to metal ion GO:0010038 253 0.012
purine nucleoside triphosphate metabolic process GO:0009144 141 0.012
positive regulation of transferase activity GO:0051347 81 0.012
cellular response to steroid hormone stimulus GO:0071383 93 0.012
regulation of cellular component organization GO:0051128 368 0.012
Rat
positive regulation of cell communication GO:0010647 271 0.012
purine containing compound catabolic process GO:0072523 138 0.012
regulation of cellular localization GO:0060341 263 0.011
purine nucleotide catabolic process GO:0006195 136 0.011
response to nutrient levels GO:0031667 370 0.011
rhythmic process GO:0048511 156 0.011
nucleoside triphosphate metabolic process GO:0009141 144 0.011
positive regulation of cellular amine metabolic process GO:0033240 3 0.011
nucleoside triphosphate catabolic process GO:0009143 123 0.011
cell growth GO:0016049 104 0.011
response to glucocorticoid GO:0051384 223 0.011
negative regulation of molecular function GO:0044092 133 0.011
response to insulin GO:0032868 133 0.011
regulation of cellular component movement GO:0051270 150 0.011
secretion by cell GO:0032940 248 0.011
regulation of neuron differentiation GO:0045664 208 0.011
Rat
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.011
ion homeostasis GO:0050801 212 0.011
cellular macromolecule localization GO:0070727 122 0.010
hepaticobiliary system development GO:0061008 90 0.010
epiboly involved in wound healing GO:0090505 2 0.010
small gtpase mediated signal transduction GO:0007264 36 0.010
positive regulation of cell development GO:0010720 176 0.010
multicellular organismal signaling GO:0035637 44 0.010
glial cell differentiation GO:0010001 65 0.010
response to cytokine GO:0034097 215 0.010
negative regulation of growth GO:0045926 37 0.010
negative regulation of cell proliferation GO:0008285 119 0.010

Pdlim2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.029
urinary system disease DOID:18 0 0.029
nervous system disease DOID:863 0 0.019