Rattus norvegicus

0 known processes

Upf3a

UPF3 regulator of nonsense transcripts homolog A (yeast)

Upf3a biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
intracellular signal transduction GO:0035556 314 0.062
regulation of molecular function GO:0065009 398 0.056
regulation of catalytic activity GO:0050790 304 0.055
regulation of phosphate metabolic process GO:0019220 349 0.051
regulation of apoptotic process GO:0042981 335 0.050
regulation of phosphorus metabolic process GO:0051174 349 0.048
nucleic acid templated transcription GO:0097659 379 0.047
positive regulation of phosphorus metabolic process GO:0010562 262 0.047
regulation of signal transduction GO:0009966 318 0.044
regulation of intracellular signal transduction GO:1902531 218 0.044
positive regulation of catalytic activity GO:0043085 184 0.044
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.039
negative regulation of rna biosynthetic process GO:1902679 118 0.039
positive regulation of cell communication GO:0010647 271 0.039
regulation of cellular protein metabolic process GO:0032268 267 0.039
positive regulation of phosphate metabolic process GO:0045937 262 0.038
cell cell signaling GO:0007267 335 0.037
programmed cell death GO:0012501 392 0.037
rna biosynthetic process GO:0032774 380 0.037
neuron differentiation GO:0030182 368 0.037
aromatic compound catabolic process GO:0019439 168 0.036
regulation of cell differentiation GO:0045595 320 0.036
positive regulation of programmed cell death GO:0043068 157 0.036
positive regulation of cellular protein metabolic process GO:0032270 167 0.036
regulation of nucleic acid templated transcription GO:1903506 380 0.035
protein phosphorylation GO:0006468 345 0.035
cell projection organization GO:0030030 302 0.035
regulation of rna metabolic process GO:0051252 391 0.034
cellular response to stress GO:0033554 269 0.034
carbohydrate derivative metabolic process GO:1901135 346 0.033
negative regulation of gene expression GO:0010629 199 0.032
nucleobase containing small molecule metabolic process GO:0055086 316 0.031
reproductive process GO:0022414 372 0.031
nucleoside metabolic process GO:0009116 179 0.031
ribonucleotide metabolic process GO:0009259 231 0.031
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.030
ribose phosphate metabolic process GO:0019693 235 0.030
transcription dna templated GO:0006351 377 0.030
organic substance catabolic process GO:1901575 316 0.029
purine ribonucleotide metabolic process GO:0009150 227 0.029
negative regulation of cell communication GO:0010648 158 0.029
positive regulation of cellular biosynthetic process GO:0031328 295 0.029
regulation of protein metabolic process GO:0051246 289 0.029
nucleoside phosphate catabolic process GO:1901292 140 0.028
transcription from rna polymerase ii promoter GO:0006366 252 0.028
positive regulation of molecular function GO:0044093 230 0.028
regulation of rna biosynthetic process GO:2001141 381 0.028
purine ribonucleotide catabolic process GO:0009154 136 0.028
positive regulation of protein metabolic process GO:0051247 178 0.028
cellular response to endogenous stimulus GO:0071495 377 0.028
nucleotide metabolic process GO:0009117 279 0.027
organophosphate metabolic process GO:0019637 370 0.027
regulation of multicellular organismal development GO:2000026 376 0.027
negative regulation of macromolecule metabolic process GO:0010605 260 0.027
glycosyl compound metabolic process GO:1901657 182 0.027
purine nucleotide metabolic process GO:0006163 229 0.026
regulation of cell proliferation GO:0042127 359 0.026
regulation of programmed cell death GO:0043067 341 0.026
cellular catabolic process GO:0044248 295 0.026
apoptotic process GO:0006915 381 0.026
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.026
positive regulation of response to stimulus GO:0048584 285 0.026
regulation of cellular component organization GO:0051128 368 0.025
regulation of phosphorylation GO:0042325 248 0.025
nucleoside catabolic process GO:0009164 126 0.025
response to growth factor GO:0070848 189 0.025
positive regulation of biosynthetic process GO:0009891 319 0.025
cellular response to growth factor stimulus GO:0071363 162 0.025
positive regulation of cell death GO:0010942 184 0.024
negative regulation of biosynthetic process GO:0009890 168 0.024
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.024
ribonucleoside metabolic process GO:0009119 174 0.024
regulation of neurogenesis GO:0050767 247 0.024
nucleoside phosphate metabolic process GO:0006753 283 0.024
small gtpase mediated signal transduction GO:0007264 36 0.024
rna metabolic process GO:0016070 406 0.024
nucleobase containing compound catabolic process GO:0034655 152 0.023
single organism reproductive process GO:0044702 297 0.023
cellular nitrogen compound catabolic process GO:0044270 163 0.023
reproduction GO:0000003 245 0.023
cell morphogenesis involved in differentiation GO:0000904 119 0.023
ras protein signal transduction GO:0007265 29 0.022
purine containing compound catabolic process GO:0072523 138 0.022
localization of cell GO:0051674 202 0.022
cellular component movement GO:0006928 248 0.022
negative regulation of signaling GO:0023057 157 0.022
multicellular organism reproduction GO:0032504 233 0.022
nucleoside triphosphate metabolic process GO:0009141 144 0.022
anatomical structure morphogenesis GO:0009653 298 0.022
regulation of transcription dna templated GO:0006355 374 0.022
purine nucleoside catabolic process GO:0006152 124 0.022
positive regulation of protein modification process GO:0031401 142 0.021
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.021
neuron development GO:0048666 286 0.021
positive regulation of apoptotic process GO:0043065 154 0.021
regulation of nervous system development GO:0051960 264 0.021
cellular amine metabolic process GO:0044106 38 0.021
regulation of protein modification process GO:0031399 194 0.021
regulation of transferase activity GO:0051338 123 0.021
positive regulation of cell differentiation GO:0045597 217 0.021
positive regulation of signaling GO:0023056 270 0.021
negative regulation of metabolic process GO:0009892 331 0.020
regulation of kinase activity GO:0043549 117 0.020
purine containing compound metabolic process GO:0072521 253 0.020
multi organism reproductive process GO:0044703 262 0.020
positive regulation of phosphorylation GO:0042327 177 0.020
positive regulation of signal transduction GO:0009967 175 0.020
multicellular organismal reproductive process GO:0048609 233 0.020
heterocycle catabolic process GO:0046700 167 0.020
regulation of cellular amino acid metabolic process GO:0006521 2 0.019
ribonucleoside catabolic process GO:0042454 126 0.019
response to nutrient GO:0007584 248 0.019
cardiovascular system development GO:0072358 134 0.019
regulation of cell development GO:0060284 263 0.019
negative regulation of signal transduction GO:0009968 83 0.019
sexual reproduction GO:0019953 148 0.019
regulation of hydrolase activity GO:0051336 143 0.019
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.019
response to oxygen levels GO:0070482 265 0.019
organic cyclic compound catabolic process GO:1901361 175 0.019
positive regulation of transcription dna templated GO:0045893 197 0.019
neuron projection development GO:0031175 273 0.018
regulation of protein phosphorylation GO:0001932 183 0.018
cell morphogenesis GO:0000902 142 0.018
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.018
positive regulation of protein phosphorylation GO:0001934 135 0.018
cellular ketone metabolic process GO:0042180 51 0.018
purine ribonucleoside metabolic process GO:0046128 168 0.018
positive regulation of intracellular signal transduction GO:1902533 138 0.018
purine nucleoside metabolic process GO:0042278 169 0.018
response to hypoxia GO:0001666 231 0.018
cellular response to oxygen containing compound GO:1901701 386 0.018
intracellular transport GO:0046907 185 0.018
cation transport GO:0006812 382 0.017
response to inorganic substance GO:0010035 377 0.017
organonitrogen compound catabolic process GO:1901565 179 0.017
negative regulation of multicellular organismal process GO:0051241 203 0.017
single organism catabolic process GO:0044712 283 0.017
cellular response to cytokine stimulus GO:0071345 127 0.017
amine metabolic process GO:0009308 38 0.017
response to nutrient levels GO:0031667 370 0.017
regulation of protein kinase activity GO:0045859 105 0.017
purine nucleotide catabolic process GO:0006195 136 0.017
negative regulation of rna metabolic process GO:0051253 123 0.017
regulation of neuron differentiation GO:0045664 208 0.017
macromolecular complex assembly GO:0065003 273 0.017
response to peptide hormone GO:0043434 278 0.017
regulation of cellular ketone metabolic process GO:0010565 27 0.017
purine ribonucleoside catabolic process GO:0046130 124 0.017
ribonucleotide catabolic process GO:0009261 136 0.016
central nervous system development GO:0007417 311 0.016
response to decreased oxygen levels GO:0036293 237 0.016
organophosphate catabolic process GO:0046434 148 0.016
positive regulation of protein kinase activity GO:0045860 73 0.016
response to extracellular stimulus GO:0009991 380 0.016
negative regulation of transcription dna templated GO:0045892 116 0.016
positive regulation of gene expression GO:0010628 244 0.016
gastrulation GO:0007369 2 0.016
response to radiation GO:0009314 137 0.016
macromolecular complex subunit organization GO:0043933 339 0.016
catabolic process GO:0009056 351 0.016
gamete generation GO:0007276 124 0.015
proteolysis GO:0006508 175 0.015
regulation of cellular amine metabolic process GO:0033238 8 0.015
purine nucleoside triphosphate catabolic process GO:0009146 122 0.015
regeneration GO:0031099 163 0.015
negative regulation of cellular metabolic process GO:0031324 281 0.015
chromosome segregation GO:0007059 2 0.015
positive regulation of nucleic acid templated transcription GO:1903508 197 0.015
response to external biotic stimulus GO:0043207 221 0.015
organelle organization GO:0006996 266 0.015
carbohydrate derivative catabolic process GO:1901136 147 0.015
negative regulation of response to stimulus GO:0048585 155 0.015
positive regulation of cellular amine metabolic process GO:0033240 3 0.015
positive regulation of developmental process GO:0051094 283 0.015
negative regulation of cellular biosynthetic process GO:0031327 161 0.015
response to cytokine GO:0034097 215 0.014
positive regulation of mapk cascade GO:0043410 92 0.014
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.014
response to bacterium GO:0009617 200 0.014
negative regulation of developmental process GO:0051093 125 0.014
negative regulation of cell differentiation GO:0045596 99 0.014
nucleoside triphosphate catabolic process GO:0009143 123 0.014
ribonucleoside triphosphate metabolic process GO:0009199 141 0.014
synaptic growth at neuromuscular junction GO:0051124 1 0.014
cellular component biogenesis GO:0044085 368 0.014
embryonic pattern specification GO:0009880 1 0.014
homeostatic process GO:0042592 331 0.013
response to other organism GO:0051707 220 0.013
negative regulation of nucleic acid templated transcription GO:1903507 117 0.013
spindle organization GO:0007051 2 0.013
sex differentiation GO:0007548 113 0.013
response to lipopolysaccharide GO:0032496 191 0.013
inorganic cation transmembrane transport GO:0098662 202 0.013
negative regulation of transcription from rna polymerase ii promoter GO:0000122 75 0.013
mapk cascade GO:0000165 140 0.013
cell cycle GO:0007049 101 0.013
cellular response to lipid GO:0071396 201 0.013
regulation of mapk cascade GO:0043408 116 0.013
gtp catabolic process GO:0006184 71 0.013
cellular component assembly GO:0022607 360 0.013
response to monosaccharide GO:0034284 159 0.013
positive regulation of rna metabolic process GO:0051254 203 0.013
glycosyl compound catabolic process GO:1901658 126 0.013
positive regulation of cell development GO:0010720 176 0.012
cellular homeostasis GO:0019725 252 0.012
regulation of growth GO:0040008 105 0.012
regulation of neuron projection development GO:0010975 161 0.012
protein complex assembly GO:0006461 263 0.012
cell migration GO:0016477 197 0.012
regulation of cellular localization GO:0060341 263 0.012
metal ion transport GO:0030001 289 0.012
positive regulation of cell proliferation GO:0008284 249 0.012
cell motility GO:0048870 202 0.012
positive regulation of nucleotide metabolic process GO:0045981 91 0.012
purine nucleoside triphosphate metabolic process GO:0009144 141 0.012
developmental process involved in reproduction GO:0003006 159 0.012
response to metal ion GO:0010038 253 0.012
regulation of organelle organization GO:0033043 80 0.012
positive regulation of transferase activity GO:0051347 81 0.012
transmembrane transport GO:0055085 412 0.012
single organism intracellular transport GO:1902582 166 0.012
regulation of cellular catabolic process GO:0031329 101 0.012
response to reactive oxygen species GO:0000302 120 0.012
dephosphorylation GO:0016311 98 0.011
nucleotide catabolic process GO:0009166 139 0.011
protein complex subunit organization GO:0071822 302 0.011
regulation of catabolic process GO:0009894 113 0.011
positive regulation of hydrolase activity GO:0051345 86 0.011
axis specification GO:0009798 4 0.011
dna metabolic process GO:0006259 96 0.011
cellular component morphogenesis GO:0032989 155 0.011
regulation of nucleotide metabolic process GO:0006140 117 0.011
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.011
positive regulation of nervous system development GO:0051962 178 0.011
positive regulation of rna biosynthetic process GO:1902680 197 0.011
positive regulation of catabolic process GO:0009896 78 0.011
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.011
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.011
response to tumor necrosis factor GO:0034612 56 0.011
positive regulation of cellular component organization GO:0051130 200 0.011
growth GO:0040007 165 0.011
head development GO:0060322 247 0.011
protein localization GO:0008104 191 0.011
cell type specific apoptotic process GO:0097285 134 0.011
positive regulation of neuron differentiation GO:0045666 126 0.011
hematopoietic progenitor cell differentiation GO:0002244 2 0.010
regulation of cell growth GO:0001558 85 0.010
secretion by cell GO:0032940 248 0.010
response to biotic stimulus GO:0009607 226 0.010
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.010
protein autophosphorylation GO:0046777 66 0.010
positive regulation of kinase activity GO:0033674 77 0.010
single organism biosynthetic process GO:0044711 342 0.010
oxoacid metabolic process GO:0043436 290 0.010
negative regulation of programmed cell death GO:0043069 183 0.010
negative regulation of transport GO:0051051 136 0.010
aging GO:0007568 241 0.010
negative regulation of cellular protein metabolic process GO:0032269 106 0.010

Upf3a disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
sensory system disease DOID:0050155 0 0.016
disease of anatomical entity DOID:7 0 0.016
nervous system disease DOID:863 0 0.016
retinal disease DOID:5679 0 0.010
eye and adnexa disease DOID:1492 0 0.010
eye disease DOID:5614 0 0.010