Rattus norvegicus

0 known processes

Tfe3

transcription factor binding to IGHM enhancer 3

(Aliases: Tcfe3,RGD1559642)

Tfe3 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
regulation of nucleic acid templated transcription GO:1903506 380 0.116
Rat
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.090
organic acid metabolic process GO:0006082 292 0.089
nucleobase containing small molecule metabolic process GO:0055086 316 0.088
purine containing compound metabolic process GO:0072521 253 0.088
positive regulation of cellular protein metabolic process GO:0032270 167 0.085
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.083
nucleotide metabolic process GO:0009117 279 0.079
regulation of catalytic activity GO:0050790 304 0.074
regulation of molecular function GO:0065009 398 0.074
oxoacid metabolic process GO:0043436 290 0.073
carbohydrate derivative metabolic process GO:1901135 346 0.073
regulation of cellular protein metabolic process GO:0032268 267 0.072
cell cell signaling GO:0007267 335 0.071
rna biosynthetic process GO:0032774 380 0.071
Rat
transmembrane transport GO:0055085 412 0.070
regulation of programmed cell death GO:0043067 341 0.067
positive regulation of cellular biosynthetic process GO:0031328 295 0.065
regulation of phosphate metabolic process GO:0019220 349 0.063
regulation of transcription dna templated GO:0006355 374 0.063
Rat
regulation of hydrolase activity GO:0051336 143 0.061
secretion by cell GO:0032940 248 0.060
regulation of rna biosynthetic process GO:2001141 381 0.060
Rat
negative regulation of cellular metabolic process GO:0031324 281 0.055
regulation of protein metabolic process GO:0051246 289 0.054
nucleic acid templated transcription GO:0097659 379 0.053
Rat
organophosphate metabolic process GO:0019637 370 0.053
nucleoside phosphate metabolic process GO:0006753 283 0.052
regulation of phosphorus metabolic process GO:0051174 349 0.052
cellular amino acid metabolic process GO:0006520 107 0.051
negative regulation of rna metabolic process GO:0051253 123 0.051
positive regulation of phosphorus metabolic process GO:0010562 262 0.050
positive regulation of molecular function GO:0044093 230 0.049
positive regulation of rna metabolic process GO:0051254 203 0.048
ion transmembrane transport GO:0034220 365 0.048
negative regulation of metabolic process GO:0009892 331 0.047
regulation of intracellular signal transduction GO:1902531 218 0.046
carboxylic acid metabolic process GO:0019752 289 0.046
regulation of cellular localization GO:0060341 263 0.046
cellular response to stress GO:0033554 269 0.045
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.045
secretion GO:0046903 307 0.045
positive regulation of cell communication GO:0010647 271 0.044
regulation of nervous system development GO:0051960 264 0.044
positive regulation of gene expression GO:0010628 244 0.043
regulation of secretion GO:0051046 224 0.043
protein complex biogenesis GO:0070271 263 0.043
mapk cascade GO:0000165 140 0.043
transcription from rna polymerase ii promoter GO:0006366 252 0.042
apoptotic process GO:0006915 381 0.042
regulation of apoptotic process GO:0042981 335 0.041
purine nucleotide metabolic process GO:0006163 229 0.041
response to other organism GO:0051707 220 0.041
positive regulation of protein serine threonine kinase activity GO:0071902 52 0.041
anion transport GO:0006820 178 0.040
negative regulation of macromolecule metabolic process GO:0010605 260 0.040
positive regulation of phosphate metabolic process GO:0045937 262 0.040
glycosyl compound metabolic process GO:1901657 182 0.040
positive regulation of nucleic acid templated transcription GO:1903508 197 0.040
regulation of mapk cascade GO:0043408 116 0.040
single organism biosynthetic process GO:0044711 342 0.040
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.039
positive regulation of nucleotide metabolic process GO:0045981 91 0.039
positive regulation of neurogenesis GO:0050769 165 0.039
regulation of protein phosphorylation GO:0001932 183 0.039
regulation of cell development GO:0060284 263 0.038
cellular response to oxygen containing compound GO:1901701 386 0.038
positive regulation of protein phosphorylation GO:0001934 135 0.037
response to inorganic substance GO:0010035 377 0.037
intracellular signal transduction GO:0035556 314 0.037
rna metabolic process GO:0016070 406 0.037
Rat
response to external biotic stimulus GO:0043207 221 0.036
synaptic growth at neuromuscular junction GO:0051124 1 0.035
purine nucleoside metabolic process GO:0042278 169 0.035
cellular response to organonitrogen compound GO:0071417 197 0.034
positive regulation of transcription dna templated GO:0045893 197 0.034
transcription dna templated GO:0006351 377 0.033
Rat
protein phosphorylation GO:0006468 345 0.033
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.033
negative regulation of protein metabolic process GO:0051248 114 0.033
signal release GO:0023061 145 0.033
signal transduction by phosphorylation GO:0023014 144 0.033
nucleoside metabolic process GO:0009116 179 0.033
positive regulation of catalytic activity GO:0043085 184 0.032
cellular ketone metabolic process GO:0042180 51 0.032
regulation of cell differentiation GO:0045595 320 0.032
purine ribonucleotide metabolic process GO:0009150 227 0.031
amine metabolic process GO:0009308 38 0.031
positive regulation of phosphorylation GO:0042327 177 0.031
regulation of cellular amino acid metabolic process GO:0006521 2 0.031
regulation of transferase activity GO:0051338 123 0.031
reproductive process GO:0022414 372 0.031
reactive oxygen species metabolic process GO:0072593 37 0.030
positive regulation of cell differentiation GO:0045597 217 0.030
brain development GO:0007420 247 0.030
ribonucleoside metabolic process GO:0009119 174 0.030
cellular response to nitrogen compound GO:1901699 210 0.030
positive regulation of signaling GO:0023056 270 0.030
positive regulation of cell death GO:0010942 184 0.030
neuron differentiation GO:0030182 368 0.030
regulation of rna metabolic process GO:0051252 391 0.030
Rat
negative regulation of cellular biosynthetic process GO:0031327 161 0.029
programmed cell death GO:0012501 392 0.029
small gtpase mediated signal transduction GO:0007264 36 0.029
regulation of cellular ketone metabolic process GO:0010565 27 0.029
gland development GO:0048732 155 0.028
regulation of cellular amine metabolic process GO:0033238 8 0.028
ribonucleotide metabolic process GO:0009259 231 0.028
ribose phosphate metabolic process GO:0019693 235 0.028
regulation of signal transduction GO:0009966 318 0.028
regulation of neurogenesis GO:0050767 247 0.028
regulation of neuron projection development GO:0010975 161 0.028
cellular component biogenesis GO:0044085 368 0.028
regulation of ion transport GO:0043269 245 0.028
positive regulation of rna biosynthetic process GO:1902680 197 0.028
cellular lipid metabolic process GO:0044255 208 0.028
response to cytokine GO:0034097 215 0.027
response to reactive oxygen species GO:0000302 120 0.027
regulation of protein modification process GO:0031399 194 0.027
oxidation reduction process GO:0055114 304 0.027
heterocycle catabolic process GO:0046700 167 0.027
purine containing compound catabolic process GO:0072523 138 0.027
regulation of nucleotide metabolic process GO:0006140 117 0.027
positive regulation of neuron differentiation GO:0045666 126 0.027
single organism reproductive process GO:0044702 297 0.027
regulation of phosphorylation GO:0042325 248 0.027
cellular component assembly GO:0022607 360 0.027
organelle organization GO:0006996 266 0.027
positive regulation of neuron projection development GO:0010976 99 0.026
macromolecular complex assembly GO:0065003 273 0.025
cell projection organization GO:0030030 302 0.025
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.025
single organism catabolic process GO:0044712 283 0.025
positive regulation of cellular amine metabolic process GO:0033240 3 0.025
positive regulation of secretion GO:0051047 140 0.025
negative regulation of gene expression GO:0010629 199 0.025
regulation of secretion by cell GO:1903530 208 0.025
positive regulation of signal transduction GO:0009967 175 0.025
central nervous system development GO:0007417 311 0.025
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.024
positive regulation of response to stimulus GO:0048584 285 0.024
cellular catabolic process GO:0044248 295 0.024
nitrogen compound transport GO:0071705 229 0.024
regulation of protein kinase activity GO:0045859 105 0.024
response to growth factor GO:0070848 189 0.024
regulation of cell projection organization GO:0031344 175 0.023
catabolic process GO:0009056 351 0.023
neuron development GO:0048666 286 0.023
regulation of neuron differentiation GO:0045664 208 0.023
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.022
positive regulation of biosynthetic process GO:0009891 319 0.022
response to oxidative stress GO:0006979 186 0.022
positive regulation of cell development GO:0010720 176 0.022
cytoplasmic transport GO:0016482 115 0.022
positive regulation of protein modification process GO:0031401 142 0.022
macromolecule localization GO:0033036 252 0.022
regulation of purine nucleotide metabolic process GO:1900542 115 0.022
g protein coupled receptor signaling pathway GO:0007186 242 0.022
nucleoside triphosphate catabolic process GO:0009143 123 0.021
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.021
response to interleukin 1 GO:0070555 55 0.021
purine ribonucleoside metabolic process GO:0046128 168 0.021
tissue development GO:0009888 252 0.021
multi organism reproductive process GO:0044703 262 0.021
neurological system process GO:0050877 219 0.021
cellular amine metabolic process GO:0044106 38 0.021
purine ribonucleoside catabolic process GO:0046130 124 0.021
neuron projection development GO:0031175 273 0.021
lipid metabolic process GO:0006629 283 0.021
aromatic compound catabolic process GO:0019439 168 0.021
ribonucleotide catabolic process GO:0009261 136 0.021
cellular response to growth factor stimulus GO:0071363 162 0.021
head development GO:0060322 247 0.020
positive regulation of protein metabolic process GO:0051247 178 0.020
response to toxic substance GO:0009636 133 0.020
cellular response to peptide GO:1901653 133 0.020
negative regulation of cell communication GO:0010648 158 0.020
negative regulation of biosynthetic process GO:0009890 168 0.020
amide transport GO:0042886 105 0.020
chemical homeostasis GO:0048878 292 0.020
negative regulation of nucleic acid templated transcription GO:1903507 117 0.020
nucleoside catabolic process GO:0009164 126 0.020
protein complex assembly GO:0006461 263 0.020
organonitrogen compound biosynthetic process GO:1901566 167 0.019
protein complex subunit organization GO:0071822 302 0.019
ras protein signal transduction GO:0007265 29 0.019
ribonucleotide biosynthetic process GO:0009260 85 0.019
immune response GO:0006955 104 0.019
carbohydrate derivative biosynthetic process GO:1901137 124 0.019
organophosphate catabolic process GO:0046434 148 0.019
positive regulation of developmental process GO:0051094 283 0.019
positive regulation of cellular component organization GO:0051130 200 0.019
nucleotide biosynthetic process GO:0009165 98 0.019
negative regulation of transcription dna templated GO:0045892 116 0.019
regulation of catabolic process GO:0009894 113 0.019
homeostatic process GO:0042592 331 0.018
cellular response to reactive oxygen species GO:0034614 55 0.018
positive regulation of apoptotic process GO:0043065 154 0.018
single organism intracellular transport GO:1902582 166 0.018
response to acid chemical GO:0001101 222 0.018
response to ketone GO:1901654 182 0.018
organic anion transport GO:0015711 132 0.018
regulation of cell proliferation GO:0042127 359 0.017
heart morphogenesis GO:0003007 3 0.017
vesicle mediated transport GO:0016192 181 0.017
response to vitamin GO:0033273 131 0.017
purine nucleoside triphosphate metabolic process GO:0009144 141 0.017
intracellular transport GO:0046907 185 0.017
negative regulation of phosphate metabolic process GO:0045936 80 0.017
purine nucleoside catabolic process GO:0006152 124 0.017
negative regulation of rna biosynthetic process GO:1902679 118 0.017
positive regulation of multicellular organismal process GO:0051240 387 0.017
response to biotic stimulus GO:0009607 226 0.017
response to bacterium GO:0009617 200 0.017
response to extracellular stimulus GO:0009991 380 0.016
cell morphogenesis involved in differentiation GO:0000904 119 0.016
response to oxygen levels GO:0070482 265 0.016
organonitrogen compound catabolic process GO:1901565 179 0.016
negative regulation of catalytic activity GO:0043086 103 0.016
regulation of cellular component organization GO:0051128 368 0.016
cellular response to lipid GO:0071396 201 0.016
positive regulation of cell proliferation GO:0008284 249 0.016
negative regulation of developmental process GO:0051093 125 0.016
cellular ion homeostasis GO:0006873 184 0.016
anatomical structure morphogenesis GO:0009653 298 0.016
neurotransmitter transport GO:0006836 42 0.016
regulation of kinase activity GO:0043549 117 0.016
positive regulation of intracellular signal transduction GO:1902533 138 0.016
protein oligomerization GO:0051259 191 0.016
ribonucleoside catabolic process GO:0042454 126 0.015
proteolysis GO:0006508 175 0.015
negative regulation of cellular protein metabolic process GO:0032269 106 0.015
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.015
positive regulation of cell projection organization GO:0031346 111 0.015
nucleobase containing compound catabolic process GO:0034655 152 0.015
neuronal action potential GO:0019228 35 0.015
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.015
cellular nitrogen compound catabolic process GO:0044270 163 0.015
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.015
development of primary sexual characteristics GO:0045137 107 0.015
anterior posterior pattern specification GO:0009952 1 0.015
positive regulation of protein kinase activity GO:0045860 73 0.015
purine nucleoside triphosphate catabolic process GO:0009146 122 0.015
glial cell differentiation GO:0010001 65 0.015
response to glucocorticoid GO:0051384 223 0.015
response to retinoic acid GO:0032526 63 0.015
negative regulation of signal transduction GO:0009968 83 0.015
sexual reproduction GO:0019953 148 0.015
regulation of canonical wnt signaling pathway GO:0060828 4 0.015
negative regulation of cell proliferation GO:0008285 119 0.015
regulation of cellular catabolic process GO:0031329 101 0.015
response to amino acid GO:0043200 75 0.015
positive regulation of nervous system development GO:0051962 178 0.014
multicellular organismal reproductive process GO:0048609 233 0.014
guanosine containing compound metabolic process GO:1901068 74 0.014
calcium ion transport GO:0006816 131 0.014
negative regulation of multicellular organismal process GO:0051241 203 0.014
protein transport GO:0015031 132 0.014
response to metal ion GO:0010038 253 0.014
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.014
regulation of nucleotide catabolic process GO:0030811 65 0.014
regulation of protein serine threonine kinase activity GO:0071900 64 0.014
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.014
negative regulation of response to stimulus GO:0048585 155 0.014
regulation of response to external stimulus GO:0032101 106 0.014
response to radiation GO:0009314 137 0.014
regulation of synaptic transmission GO:0050804 141 0.014
purine nucleotide biosynthetic process GO:0006164 83 0.014
purine nucleotide catabolic process GO:0006195 136 0.014
purine containing compound biosynthetic process GO:0072522 85 0.014
reproductive structure development GO:0048608 128 0.013
organic acid transport GO:0015849 116 0.013
cyclic nucleotide biosynthetic process GO:0009190 63 0.013
macromolecular complex subunit organization GO:0043933 339 0.013
cellular component morphogenesis GO:0032989 155 0.013
cell adhesion GO:0007155 110 0.013
defense response GO:0006952 194 0.013
regulation of transmembrane transport GO:0034762 122 0.013
negative regulation of cell death GO:0060548 229 0.013
regulation of response to stress GO:0080134 126 0.013
glycosyl compound catabolic process GO:1901658 126 0.013
nucleoside phosphate catabolic process GO:1901292 140 0.013
regulation of map kinase activity GO:0043405 53 0.013
ribose phosphate biosynthetic process GO:0046390 87 0.013
organic substance catabolic process GO:1901575 316 0.013
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.013
response to peptide GO:1901652 292 0.013
negative regulation of molecular function GO:0044092 133 0.013
dna metabolic process GO:0006259 96 0.013
multicellular organism reproduction GO:0032504 233 0.013
tube development GO:0035295 89 0.013
gastrulation GO:0007369 2 0.012
regulation of hormone levels GO:0010817 187 0.012
cellular chemical homeostasis GO:0055082 247 0.012
regulation of gtp catabolic process GO:0033124 58 0.012
positive regulation of programmed cell death GO:0043068 157 0.012
regulation of nucleoside metabolic process GO:0009118 66 0.012
regulation of establishment of protein localization GO:0070201 69 0.012
myelination GO:0042552 39 0.012
response to nutrient levels GO:0031667 370 0.012
gtp metabolic process GO:0046039 72 0.012
regulation of protein localization GO:0032880 81 0.012
immune system process GO:0002376 204 0.012
regulation of neuron death GO:1901214 115 0.012
cellular response to cytokine stimulus GO:0071345 127 0.012
regulation of g protein coupled receptor protein signaling pathway GO:0008277 28 0.012
negative regulation of g protein coupled receptor protein signaling pathway GO:0045744 15 0.012
regulation of growth GO:0040008 105 0.012
cyclic nucleotide metabolic process GO:0009187 80 0.012
growth GO:0040007 165 0.012
regulation of blood pressure GO:0008217 83 0.012
positive regulation of map kinase activity GO:0043406 46 0.012
embryonic pattern specification GO:0009880 1 0.012
anatomical structure formation involved in morphogenesis GO:0048646 83 0.012
positive regulation of transferase activity GO:0051347 81 0.012
muscle structure development GO:0061061 87 0.012
defense response to gram negative bacterium GO:0050829 3 0.012
cellular response to oxidative stress GO:0034599 76 0.012
reactive nitrogen species metabolic process GO:2001057 1 0.011
positive regulation of mapk cascade GO:0043410 92 0.011
response to alkaloid GO:0043279 132 0.011
cyclic purine nucleotide metabolic process GO:0052652 62 0.011
cell type specific apoptotic process GO:0097285 134 0.011
positive regulation of kinase activity GO:0033674 77 0.011
ion homeostasis GO:0050801 212 0.011
organophosphate biosynthetic process GO:0090407 143 0.011
cellular response to oxygen levels GO:0071453 60 0.011
regulation of purine nucleotide catabolic process GO:0033121 65 0.011
positive regulation of catabolic process GO:0009896 78 0.011
protein localization GO:0008104 191 0.011
cellular response to tumor necrosis factor GO:0071356 46 0.011
protein heterooligomerization GO:0051291 89 0.011
gliogenesis GO:0042063 93 0.011
nucleoside triphosphate metabolic process GO:0009141 144 0.011
synaptic transmission GO:0007268 235 0.011
regulation of purine nucleotide biosynthetic process GO:1900371 46 0.011
defense response to gram positive bacterium GO:0050830 2 0.011
nucleoside phosphate biosynthetic process GO:1901293 102 0.011
camp metabolic process GO:0046058 63 0.011
neuron neuron synaptic transmission GO:0007270 60 0.011
axis specification GO:0009798 4 0.011
regulation of system process GO:0044057 208 0.011
multi multicellular organism process GO:0044706 138 0.011
positive regulation of transport GO:0051050 245 0.011
regeneration GO:0031099 163 0.011
regulation of protein transport GO:0051223 68 0.011
eye morphogenesis GO:0048592 4 0.011
regulation of membrane potential GO:0042391 110 0.011
aging GO:0007568 241 0.010
salivary gland development GO:0007431 3 0.010
carboxylic acid biosynthetic process GO:0046394 83 0.010
negative regulation of intracellular signal transduction GO:1902532 38 0.010
neuron death GO:0070997 127 0.010
transmission of nerve impulse GO:0019226 42 0.010
female pregnancy GO:0007565 122 0.010
synapse organization GO:0050808 46 0.010
membrane organization GO:0061024 94 0.010
response to peptide hormone GO:0043434 278 0.010
cell part morphogenesis GO:0032990 123 0.010
coenzyme metabolic process GO:0006732 86 0.010
negative regulation of phosphorus metabolic process GO:0010563 80 0.010
organic acid biosynthetic process GO:0016053 83 0.010

Tfe3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of metabolism DOID:0014667 0 0.019
disease of anatomical entity DOID:7 0 0.018
nervous system disease DOID:863 0 0.018
inherited metabolic disorder DOID:655 0 0.017
sensory system disease DOID:0050155 0 0.012