Rattus norvegicus

0 known processes

Trim59

tripartite motif-containing 59

(Aliases: RGD1311956)

Trim59 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
regulation of nucleic acid templated transcription GO:1903506 380 0.068
regeneration GO:0031099 163 0.059
transcription from rna polymerase ii promoter GO:0006366 252 0.059
negative regulation of metabolic process GO:0009892 331 0.047
rna biosynthetic process GO:0032774 380 0.047
cellular protein localization GO:0034613 122 0.046
macromolecular complex assembly GO:0065003 273 0.043
transcription dna templated GO:0006351 377 0.043
cellular component assembly GO:0022607 360 0.043
protein complex biogenesis GO:0070271 263 0.042
regulation of protein metabolic process GO:0051246 289 0.042
catabolic process GO:0009056 351 0.042
regulation of rna biosynthetic process GO:2001141 381 0.041
rna metabolic process GO:0016070 406 0.039
cellular amine metabolic process GO:0044106 38 0.038
neuron differentiation GO:0030182 368 0.037
protein complex assembly GO:0006461 263 0.036
regulation of multicellular organismal development GO:2000026 376 0.035
regulation of cellular amine metabolic process GO:0033238 8 0.035
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.035
regulation of neurogenesis GO:0050767 247 0.035
negative regulation of macromolecule metabolic process GO:0010605 260 0.034
oxoacid metabolic process GO:0043436 290 0.034
regulation of nervous system development GO:0051960 264 0.032
head development GO:0060322 247 0.032
amine metabolic process GO:0009308 38 0.032
negative regulation of gene expression GO:0010629 199 0.031
cellular amino acid metabolic process GO:0006520 107 0.031
regulation of cell differentiation GO:0045595 320 0.030
regulation of cell development GO:0060284 263 0.030
organic substance catabolic process GO:1901575 316 0.030
negative regulation of cellular metabolic process GO:0031324 281 0.030
intracellular protein transport GO:0006886 79 0.030
protein oligomerization GO:0051259 191 0.029
regulation of apoptotic process GO:0042981 335 0.029
regulation of cellular amino acid metabolic process GO:0006521 2 0.029
positive regulation of cellular amine metabolic process GO:0033240 3 0.027
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.027
regulation of rna metabolic process GO:0051252 391 0.026
regulation of transcription dna templated GO:0006355 374 0.026
cellular component biogenesis GO:0044085 368 0.026
negative regulation of cell death GO:0060548 229 0.026
positive regulation of multicellular organismal process GO:0051240 387 0.026
apoptotic process GO:0006915 381 0.026
negative regulation of programmed cell death GO:0043069 183 0.025
protein complex subunit organization GO:0071822 302 0.025
cellular response to oxygen containing compound GO:1901701 386 0.025
negative regulation of cell communication GO:0010648 158 0.024
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.024
macromolecular complex subunit organization GO:0043933 339 0.023
protein localization GO:0008104 191 0.023
neuron projection development GO:0031175 273 0.023
regulation of cellular ketone metabolic process GO:0010565 27 0.022
regulation of programmed cell death GO:0043067 341 0.022
positive regulation of developmental process GO:0051094 283 0.022
positive regulation of cell differentiation GO:0045597 217 0.022
macromolecule localization GO:0033036 252 0.022
cellular ketone metabolic process GO:0042180 51 0.021
synaptic transmission GO:0007268 235 0.021
regulation of phosphorus metabolic process GO:0051174 349 0.021
organic acid metabolic process GO:0006082 292 0.021
carboxylic acid metabolic process GO:0019752 289 0.021
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.021
peptidyl amino acid modification GO:0018193 126 0.021
regulation of cellular protein metabolic process GO:0032268 267 0.021
negative regulation of response to stimulus GO:0048585 155 0.021
carbohydrate derivative metabolic process GO:1901135 346 0.021
cellular component movement GO:0006928 248 0.021
negative regulation of apoptotic process GO:0043066 181 0.020
positive regulation of cellular biosynthetic process GO:0031328 295 0.020
circulatory system development GO:0072359 134 0.020
cell cell signaling GO:0007267 335 0.020
cell projection organization GO:0030030 302 0.020
central nervous system development GO:0007417 311 0.020
negative regulation of signaling GO:0023057 157 0.019
programmed cell death GO:0012501 392 0.019
single organism intracellular transport GO:1902582 166 0.019
single organism reproductive process GO:0044702 297 0.019
reproductive process GO:0022414 372 0.019
monovalent inorganic cation transport GO:0015672 172 0.019
positive regulation of biosynthetic process GO:0009891 319 0.019
cellular response to organic cyclic compound GO:0071407 202 0.019
wound healing GO:0042060 122 0.018
positive regulation of rna biosynthetic process GO:1902680 197 0.018
microtubule organizing center organization GO:0031023 1 0.018
regulation of cell proliferation GO:0042127 359 0.018
response to peptide hormone GO:0043434 278 0.018
protein phosphorylation GO:0006468 345 0.018
response to nutrient levels GO:0031667 370 0.018
cellular response to endogenous stimulus GO:0071495 377 0.018
regulation of neuron differentiation GO:0045664 208 0.018
cellular macromolecule localization GO:0070727 122 0.018
response to peptide GO:1901652 292 0.018
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.018
cellular catabolic process GO:0044248 295 0.017
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.017
neuron development GO:0048666 286 0.017
organ regeneration GO:0031100 101 0.017
brain development GO:0007420 247 0.017
multi organism reproductive process GO:0044703 262 0.017
response to metal ion GO:0010038 253 0.017
response to extracellular stimulus GO:0009991 380 0.017
positive regulation of molecular function GO:0044093 230 0.017
regulation of membrane potential GO:0042391 110 0.017
response to inorganic substance GO:0010035 377 0.017
localization of cell GO:0051674 202 0.017
regulation of transferase activity GO:0051338 123 0.017
positive regulation of gene expression GO:0010628 244 0.017
response to bacterium GO:0009617 200 0.016
aging GO:0007568 241 0.016
positive regulation of catalytic activity GO:0043085 184 0.016
positive regulation of protein metabolic process GO:0051247 178 0.016
regulation of signal transduction GO:0009966 318 0.016
establishment of protein localization GO:0045184 141 0.016
regulation of catabolic process GO:0009894 113 0.016
positive regulation of cell projection organization GO:0031346 111 0.016
cell cycle checkpoint GO:0000075 2 0.016
axis specification GO:0009798 4 0.016
nitrogen compound transport GO:0071705 229 0.015
sexual reproduction GO:0019953 148 0.015
regulation of catalytic activity GO:0050790 304 0.015
positive regulation of neurogenesis GO:0050769 165 0.015
regulation of protein phosphorylation GO:0001932 183 0.015
positive regulation of cell proliferation GO:0008284 249 0.015
positive regulation of cell development GO:0010720 176 0.015
cellular response to stress GO:0033554 269 0.015
organophosphate metabolic process GO:0019637 370 0.015
regulation of molecular function GO:0065009 398 0.015
organelle organization GO:0006996 266 0.015
positive regulation of signaling GO:0023056 270 0.015
positive regulation of nucleic acid templated transcription GO:1903508 197 0.015
negative regulation of cellular biosynthetic process GO:0031327 161 0.015
regulation of phosphorylation GO:0042325 248 0.015
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.015
intracellular signal transduction GO:0035556 314 0.015
nucleic acid templated transcription GO:0097659 379 0.015
multicellular organism reproduction GO:0032504 233 0.015
homeostatic process GO:0042592 331 0.014
positive regulation of response to stimulus GO:0048584 285 0.014
negative regulation of biosynthetic process GO:0009890 168 0.014
regulation of mapk cascade GO:0043408 116 0.014
multicellular organismal reproductive process GO:0048609 233 0.014
nucleoside phosphate metabolic process GO:0006753 283 0.014
regulation of intracellular signal transduction GO:1902531 218 0.014
positive regulation of phosphorylation GO:0042327 177 0.014
cellular response to hormone stimulus GO:0032870 247 0.014
male gamete generation GO:0048232 99 0.014
gamete generation GO:0007276 124 0.014
response to estradiol GO:0032355 164 0.013
cytoskeleton dependent cytokinesis GO:0061640 2 0.013
organic cyclic compound catabolic process GO:1901361 175 0.013
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.013
coenzyme metabolic process GO:0006732 86 0.013
positive regulation of neuron projection development GO:0010976 99 0.013
negative regulation of cellular component organization GO:0051129 83 0.013
regulation of cell projection organization GO:0031344 175 0.013
regulation of kinase activity GO:0043549 117 0.013
positive regulation of neuron differentiation GO:0045666 126 0.013
response to estrogen GO:0043627 232 0.013
cell motility GO:0048870 202 0.013
single organism organelle organization GO:1902589 180 0.013
response to wounding GO:0009611 254 0.013
response to hypoxia GO:0001666 231 0.013
response to decreased oxygen levels GO:0036293 237 0.013
positive regulation of cell communication GO:0010647 271 0.013
chromosome segregation GO:0007059 2 0.013
response to molecule of bacterial origin GO:0002237 194 0.013
positive regulation of nervous system development GO:0051962 178 0.012
response to other organism GO:0051707 220 0.012
positive regulation of protein phosphorylation GO:0001934 135 0.012
negative regulation of rna metabolic process GO:0051253 123 0.012
single organism biosynthetic process GO:0044711 342 0.012
regulation of synaptic transmission GO:0050804 141 0.012
regulation of nucleocytoplasmic transport GO:0046822 28 0.012
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.012
positive regulation of cell death GO:0010942 184 0.012
regulation of neuron projection development GO:0010975 161 0.012
response to transition metal nanoparticle GO:1990267 122 0.012
proteolysis GO:0006508 175 0.012
regulation of response to stress GO:0080134 126 0.012
nucleobase containing small molecule metabolic process GO:0055086 316 0.012
nucleobase containing compound catabolic process GO:0034655 152 0.012
regulation of phosphate metabolic process GO:0019220 349 0.012
cytoplasmic transport GO:0016482 115 0.012
centrosome organization GO:0051297 1 0.012
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.012
response to growth factor GO:0070848 189 0.012
circulatory system process GO:0003013 183 0.012
heterocycle catabolic process GO:0046700 167 0.012
reproduction GO:0000003 245 0.012
positive regulation of rna metabolic process GO:0051254 203 0.012
cell migration GO:0016477 197 0.012
centrosome cycle GO:0007098 1 0.012
nucleotide metabolic process GO:0009117 279 0.012
gliogenesis GO:0042063 93 0.011
spermatogenesis GO:0007283 99 0.011
developmental process involved in reproduction GO:0003006 159 0.011
regulation of system process GO:0044057 208 0.011
positive regulation of cellular component organization GO:0051130 200 0.011
macromolecule catabolic process GO:0009057 58 0.011
transmembrane transport GO:0055085 412 0.011
ion transmembrane transport GO:0034220 365 0.011
gastrulation GO:0007369 2 0.011
regulation of cellular localization GO:0060341 263 0.011
purine containing compound metabolic process GO:0072521 253 0.011
positive regulation of intracellular protein transport GO:0090316 20 0.011
regulation of protein modification process GO:0031399 194 0.011
response to ketone GO:1901654 182 0.011
negative regulation of cellular protein metabolic process GO:0032269 106 0.011
anion transport GO:0006820 178 0.011
anatomical structure morphogenesis GO:0009653 298 0.011
small gtpase mediated signal transduction GO:0007264 36 0.011
regulation of hydrolase activity GO:0051336 143 0.011
regulation of protein localization GO:0032880 81 0.011
protein targeting GO:0006605 61 0.011
immune system process GO:0002376 204 0.011
meiotic cell cycle process GO:1903046 3 0.011
cation transport GO:0006812 382 0.011
response to lipopolysaccharide GO:0032496 191 0.011
positive regulation of blood circulation GO:1903524 65 0.011
regulation of intracellular transport GO:0032386 65 0.010
chemosensory behavior GO:0007635 2 0.010
positive regulation of transcription dna templated GO:0045893 197 0.010
positive regulation of phosphorus metabolic process GO:0010562 262 0.010

Trim59 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.012
nervous system disease DOID:863 0 0.012