Rattus norvegicus

34 known processes

Phrf1

PHD and ring finger domains 1

Phrf1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
rna biosynthetic process GO:0032774 380 0.139
rna metabolic process GO:0016070 406 0.108
regulation of phosphate metabolic process GO:0019220 349 0.097
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.092
catabolic process GO:0009056 351 0.089
regulation of nucleic acid templated transcription GO:1903506 380 0.087
regulation of phosphorus metabolic process GO:0051174 349 0.073
single organism catabolic process GO:0044712 283 0.066
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.065
oxoacid metabolic process GO:0043436 290 0.059
carboxylic acid metabolic process GO:0019752 289 0.057
macromolecular complex subunit organization GO:0043933 339 0.057
regulation of rna biosynthetic process GO:2001141 381 0.053
nucleotide metabolic process GO:0009117 279 0.053
regulation of nervous system development GO:0051960 264 0.053
intracellular signal transduction GO:0035556 314 0.050
regulation of phosphorylation GO:0042325 248 0.050
nucleic acid templated transcription GO:0097659 379 0.049
regulation of transcription dna templated GO:0006355 374 0.048
nucleobase containing small molecule metabolic process GO:0055086 316 0.048
transcription dna templated GO:0006351 377 0.046
central nervous system development GO:0007417 311 0.045
negative regulation of metabolic process GO:0009892 331 0.044
negative regulation of macromolecule metabolic process GO:0010605 260 0.044
regulation of cellular component organization GO:0051128 368 0.043
transcription from rna polymerase ii promoter GO:0006366 252 0.043
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.043
organic acid metabolic process GO:0006082 292 0.042
cellular component movement GO:0006928 248 0.042
carbohydrate derivative metabolic process GO:1901135 346 0.042
regulation of multicellular organismal development GO:2000026 376 0.041
response to inorganic substance GO:0010035 377 0.041
response to extracellular stimulus GO:0009991 380 0.039
positive regulation of cellular biosynthetic process GO:0031328 295 0.038
positive regulation of biosynthetic process GO:0009891 319 0.037
regulation of cellular ketone metabolic process GO:0010565 27 0.037
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.037
positive regulation of rna metabolic process GO:0051254 203 0.036
regulation of rna metabolic process GO:0051252 391 0.036
Fly
response to acid chemical GO:0001101 222 0.036
single organism biosynthetic process GO:0044711 342 0.035
positive regulation of transport GO:0051050 245 0.035
regulation of cell differentiation GO:0045595 320 0.034
organic substance catabolic process GO:1901575 316 0.034
regulation of signal transduction GO:0009966 318 0.034
macromolecular complex assembly GO:0065003 273 0.033
apoptotic process GO:0006915 381 0.033
positive regulation of cellular component organization GO:0051130 200 0.031
reproductive process GO:0022414 372 0.031
anatomical structure morphogenesis GO:0009653 298 0.031
organelle organization GO:0006996 266 0.031
response to metal ion GO:0010038 253 0.031
cellular response to stress GO:0033554 269 0.031
positive regulation of transcription dna templated GO:0045893 197 0.031
response to oxidative stress GO:0006979 186 0.031
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.030
programmed cell death GO:0012501 392 0.030
regulation of neurogenesis GO:0050767 247 0.030
cell projection organization GO:0030030 302 0.030
multi organism reproductive process GO:0044703 262 0.029
positive regulation of phosphate metabolic process GO:0045937 262 0.029
response to nutrient levels GO:0031667 370 0.029
neurological system process GO:0050877 219 0.028
regulation of molecular function GO:0065009 398 0.028
cellular amino acid metabolic process GO:0006520 107 0.028
reproduction GO:0000003 245 0.028
organic cyclic compound catabolic process GO:1901361 175 0.028
intracellular transport GO:0046907 185 0.028
response to wounding GO:0009611 254 0.028
wound healing GO:0042060 122 0.028
purine containing compound metabolic process GO:0072521 253 0.028
positive regulation of phosphorus metabolic process GO:0010562 262 0.027
cellular amine metabolic process GO:0044106 38 0.026
regulation of cell development GO:0060284 263 0.026
cellular component assembly GO:0022607 360 0.026
positive regulation of gene expression GO:0010628 244 0.026
positive regulation of cell differentiation GO:0045597 217 0.026
multicellular organismal reproductive process GO:0048609 233 0.025
regulation of cellular amine metabolic process GO:0033238 8 0.025
positive regulation of hydrolase activity GO:0051345 86 0.025
nucleoside phosphate metabolic process GO:0006753 283 0.025
tissue development GO:0009888 252 0.025
single organism organelle organization GO:1902589 180 0.025
heterocycle catabolic process GO:0046700 167 0.024
regulation of cellular protein metabolic process GO:0032268 267 0.024
ribonucleotide metabolic process GO:0009259 231 0.024
cellular ketone metabolic process GO:0042180 51 0.024
single organism intracellular transport GO:1902582 166 0.024
response to oxygen levels GO:0070482 265 0.024
cellular component morphogenesis GO:0032989 155 0.024
positive regulation of molecular function GO:0044093 230 0.024
lipid metabolic process GO:0006629 283 0.024
bmp signaling pathway GO:0030509 4 0.024
sexual reproduction GO:0019953 148 0.024
cellular catabolic process GO:0044248 295 0.024
positive regulation of nervous system development GO:0051962 178 0.023
regulation of cellular amino acid metabolic process GO:0006521 2 0.023
regulation of cell projection organization GO:0031344 175 0.023
positive regulation of nucleic acid templated transcription GO:1903508 197 0.023
negative regulation of biosynthetic process GO:0009890 168 0.023
taxis GO:0042330 67 0.023
purine nucleoside triphosphate metabolic process GO:0009144 141 0.023
negative regulation of nucleic acid templated transcription GO:1903507 117 0.022
cell morphogenesis involved in differentiation GO:0000904 119 0.022
protein phosphorylation GO:0006468 345 0.022
purine ribonucleotide metabolic process GO:0009150 227 0.022
positive regulation of developmental process GO:0051094 283 0.022
regulation of hydrolase activity GO:0051336 143 0.022
negative regulation of gene expression GO:0010629 199 0.021
regulation of cell motility GO:2000145 131 0.021
biological adhesion GO:0022610 110 0.021
behavior GO:0007610 205 0.021
protein complex subunit organization GO:0071822 302 0.021
cytoplasmic transport GO:0016482 115 0.021
cellular component biogenesis GO:0044085 368 0.021
organophosphate metabolic process GO:0019637 370 0.021
secretion GO:0046903 307 0.021
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.021
organonitrogen compound catabolic process GO:1901565 179 0.021
amine metabolic process GO:0009308 38 0.020
response to peptide GO:1901652 292 0.020
multicellular organism reproduction GO:0032504 233 0.020
response to purine containing compound GO:0014074 126 0.020
cellular response to oxygen containing compound GO:1901701 386 0.020
regulation of catalytic activity GO:0050790 304 0.020
positive regulation of rna biosynthetic process GO:1902680 197 0.020
neuron differentiation GO:0030182 368 0.020
cellular response to endogenous stimulus GO:0071495 377 0.020
chromatin assembly or disassembly GO:0006333 1 0.019
protein complex biogenesis GO:0070271 263 0.019
response to estrogen GO:0043627 232 0.019
positive regulation of cell projection organization GO:0031346 111 0.019
nucleobase containing compound catabolic process GO:0034655 152 0.019
homeostatic process GO:0042592 331 0.019
regulation of protein metabolic process GO:0051246 289 0.019
response to glucocorticoid GO:0051384 223 0.019
protein complex assembly GO:0006461 263 0.018
positive regulation of multicellular organismal process GO:0051240 387 0.018
single organism reproductive process GO:0044702 297 0.018
neuron projection development GO:0031175 273 0.018
negative regulation of transcription dna templated GO:0045892 116 0.018
positive regulation of cell development GO:0010720 176 0.018
regulation of system process GO:0044057 208 0.018
brain development GO:0007420 247 0.018
purine nucleoside metabolic process GO:0042278 169 0.018
response to ethanol GO:0045471 162 0.018
negative regulation of cellular metabolic process GO:0031324 281 0.018
carbohydrate metabolic process GO:0005975 130 0.018
cell morphogenesis GO:0000902 142 0.017
cellular lipid metabolic process GO:0044255 208 0.017
response to decreased oxygen levels GO:0036293 237 0.017
regulation of programmed cell death GO:0043067 341 0.017
regulation of neuron projection development GO:0010975 161 0.017
positive regulation of cellular amine metabolic process GO:0033240 3 0.017
ribose phosphate metabolic process GO:0019693 235 0.017
cellular divalent inorganic cation homeostasis GO:0072503 162 0.017
regeneration GO:0031099 163 0.017
response to growth factor GO:0070848 189 0.017
cellular homeostasis GO:0019725 252 0.017
neuron development GO:0048666 286 0.017
organophosphate catabolic process GO:0046434 148 0.017
purine nucleotide metabolic process GO:0006163 229 0.017
negative regulation of rna metabolic process GO:0051253 123 0.017
growth GO:0040007 165 0.017
response to fatty acid GO:0070542 65 0.017
purine nucleotide catabolic process GO:0006195 136 0.016
anterior posterior pattern specification GO:0009952 1 0.016
single organism carbohydrate metabolic process GO:0044723 118 0.016
ribonucleoside triphosphate catabolic process GO:0009203 122 0.016
response to peptide hormone GO:0043434 278 0.016
regulation of neuron differentiation GO:0045664 208 0.016
vasculogenesis GO:0001570 3 0.016
axis specification GO:0009798 4 0.016
regulation of apoptotic process GO:0042981 335 0.016
chromatin modification GO:0016568 33 0.016
gamete generation GO:0007276 124 0.016
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.016
positive regulation of neurogenesis GO:0050769 165 0.016
actin filament based process GO:0030029 86 0.016
positive regulation of signaling GO:0023056 270 0.016
oxidation reduction process GO:0055114 304 0.016
response to reactive oxygen species GO:0000302 120 0.016
peptidyl amino acid modification GO:0018193 126 0.016
calcium ion homeostasis GO:0055074 162 0.016
positive regulation of cellular component movement GO:0051272 102 0.016
nucleoside metabolic process GO:0009116 179 0.016
negative regulation of response to stimulus GO:0048585 155 0.016
enzyme linked receptor protein signaling pathway GO:0007167 116 0.015
response to corticosteroid GO:0031960 235 0.015
cellular carbohydrate metabolic process GO:0044262 72 0.015
regulation of purine nucleotide catabolic process GO:0033121 65 0.015
cell adhesion GO:0007155 110 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.015
cell projection morphogenesis GO:0048858 123 0.015
regulation of lipid metabolic process GO:0019216 68 0.015
nitrogen compound transport GO:0071705 229 0.015
cellular response to growth factor stimulus GO:0071363 162 0.015
cation transport GO:0006812 382 0.015
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.015
cellular chemical homeostasis GO:0055082 247 0.015
regulation of intracellular signal transduction GO:1902531 218 0.015
purine ribonucleoside catabolic process GO:0046130 124 0.015
response to nutrient GO:0007584 248 0.015
ribonucleotide catabolic process GO:0009261 136 0.015
positive regulation of response to stimulus GO:0048584 285 0.014
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.014
metal ion homeostasis GO:0055065 186 0.014
response to monosaccharide GO:0034284 159 0.014
chemical homeostasis GO:0048878 292 0.014
purine containing compound catabolic process GO:0072523 138 0.014
ribonucleoside metabolic process GO:0009119 174 0.014
cellular nitrogen compound catabolic process GO:0044270 163 0.014
regulation of anatomical structure size GO:0090066 135 0.014
negative regulation of cell death GO:0060548 229 0.014
purine ribonucleoside metabolic process GO:0046128 168 0.014
response to toxic substance GO:0009636 133 0.014
response to carbohydrate GO:0009743 183 0.014
golgi vesicle transport GO:0048193 22 0.014
positive regulation of neuron projection development GO:0010976 99 0.014
regulation of nucleoside metabolic process GO:0009118 66 0.014
secretion by cell GO:0032940 248 0.014
cell growth GO:0016049 104 0.014
vesicle mediated transport GO:0016192 181 0.014
cellular macromolecular complex assembly GO:0034622 58 0.014
negative regulation of rna biosynthetic process GO:1902679 118 0.014
response to organophosphorus GO:0046683 102 0.014
peptidyl tyrosine modification GO:0018212 72 0.014
negative regulation of programmed cell death GO:0043069 183 0.014
regulation of cellular catabolic process GO:0031329 101 0.014
regulation of cellular component movement GO:0051270 150 0.013
alternative mrna splicing via spliceosome GO:0000380 4 0.013
Fly
negative regulation of cellular biosynthetic process GO:0031327 161 0.013
cell part morphogenesis GO:0032990 123 0.013
transmembrane transport GO:0055085 412 0.013
nucleotide catabolic process GO:0009166 139 0.013
response to fungicide GO:0060992 20 0.013
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.013
mapk cascade GO:0000165 140 0.013
cell motility GO:0048870 202 0.013
regulation of purine nucleotide metabolic process GO:1900542 115 0.013
divalent inorganic cation homeostasis GO:0072507 165 0.013
cell cell signaling GO:0007267 335 0.013
positive regulation of programmed cell death GO:0043068 157 0.013
gliogenesis GO:0042063 93 0.013
cellular response to organonitrogen compound GO:0071417 197 0.013
carbohydrate derivative catabolic process GO:1901136 147 0.013
cellular metal ion homeostasis GO:0006875 172 0.012
signal transduction by phosphorylation GO:0023014 144 0.012
lipid biosynthetic process GO:0008610 128 0.012
localization of cell GO:0051674 202 0.012
reactive oxygen species biosynthetic process GO:1903409 8 0.012
signal release GO:0023061 145 0.012
embryonic pattern specification GO:0009880 1 0.012
ras protein signal transduction GO:0007265 29 0.012
glycosyl compound metabolic process GO:1901657 182 0.012
macromolecule localization GO:0033036 252 0.012
response to hydrogen peroxide GO:0042542 89 0.012
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.012
cellular calcium ion homeostasis GO:0006874 160 0.012
small gtpase mediated signal transduction GO:0007264 36 0.012
head development GO:0060322 247 0.012
positive regulation of catalytic activity GO:0043085 184 0.012
positive regulation of nucleoside metabolic process GO:0045979 55 0.012
regulation of gene expression epigenetic GO:0040029 10 0.012
response to other organism GO:0051707 220 0.012
regulation of cell growth GO:0001558 85 0.012
regulation of nucleotide metabolic process GO:0006140 117 0.012
cell migration GO:0016477 197 0.012
regulation of cellular localization GO:0060341 263 0.012
negative regulation of cell communication GO:0010648 158 0.012
cation homeostasis GO:0055080 195 0.012
hair cell differentiation GO:0035315 2 0.012
positive regulation of cell proliferation GO:0008284 249 0.012
response to cytokine GO:0034097 215 0.011
positive regulation of neuron differentiation GO:0045666 126 0.011
nucleoside phosphate catabolic process GO:1901292 140 0.011
regulation of gtpase activity GO:0043087 57 0.011
response to external biotic stimulus GO:0043207 221 0.011
chemotaxis GO:0006935 66 0.011
rna localization GO:0006403 4 0.011
regulation of cell migration GO:0030334 128 0.011
cellular cation homeostasis GO:0030003 180 0.011
monocarboxylic acid metabolic process GO:0032787 152 0.011
response to hypoxia GO:0001666 231 0.011
neural crest cell development GO:0014032 2 0.011
nuclear transport GO:0051169 49 0.011
mechanoreceptor differentiation GO:0042490 2 0.011
cardiac chamber development GO:0003205 1 0.011
regulation of protein modification process GO:0031399 194 0.011
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathway GO:0090101 2 0.011
circulatory system process GO:0003013 183 0.011
negative regulation of protein metabolic process GO:0051248 114 0.011
purine ribonucleotide catabolic process GO:0009154 136 0.011
cell type specific apoptotic process GO:0097285 134 0.011
small molecule biosynthetic process GO:0044283 124 0.011
reactive nitrogen species metabolic process GO:2001057 1 0.011
divalent inorganic cation transport GO:0072511 134 0.011
cognition GO:0050890 92 0.011
response to glucose GO:0009749 136 0.011
synaptic vesicle endocytosis GO:0048488 4 0.011
neuron death GO:0070997 127 0.011
spindle organization GO:0007051 2 0.011
response to estradiol GO:0032355 164 0.011
response to bacterium GO:0009617 200 0.011
proteolysis GO:0006508 175 0.010
dendrite morphogenesis GO:0048813 43 0.010
response to mechanical stimulus GO:0009612 134 0.010
positive regulation of cell communication GO:0010647 271 0.010
positive regulation of nucleotide metabolic process GO:0045981 91 0.010
positive regulation of cell death GO:0010942 184 0.010
positive regulation of protein metabolic process GO:0051247 178 0.010
defense response GO:0006952 194 0.010
dna metabolic process GO:0006259 96 0.010
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.010
glycosyl compound catabolic process GO:1901658 126 0.010
regulation of transferase activity GO:0051338 123 0.010
developmental process involved in reproduction GO:0003006 159 0.010
maintenance of location GO:0051235 17 0.010
single organism behavior GO:0044708 130 0.010
aromatic compound catabolic process GO:0019439 168 0.010
dendrite development GO:0016358 72 0.010
regulation of hormone levels GO:0010817 187 0.010
response to hexose GO:0009746 144 0.010
nucleoside catabolic process GO:0009164 126 0.010
purine nucleoside catabolic process GO:0006152 124 0.010
signal transduction involved in regulation of gene expression GO:0023019 4 0.010
blood circulation GO:0008015 183 0.010

Phrf1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.027
nervous system disease DOID:863 0 0.027
disease of metabolism DOID:0014667 0 0.012
gastrointestinal system disease DOID:77 0 0.011
central nervous system disease DOID:331 0 0.010
sensory system disease DOID:0050155 0 0.010