Rattus norvegicus

0 known processes

Ythdf3

YTH domain family, member 3

Ythdf3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
response to hypoxia GO:0001666 231 0.136
response to radiation GO:0009314 137 0.134
organic acid metabolic process GO:0006082 292 0.128
cellular response to endogenous stimulus GO:0071495 377 0.124
response to decreased oxygen levels GO:0036293 237 0.121
positive regulation of response to stimulus GO:0048584 285 0.115
cellular component assembly GO:0022607 360 0.111
neuron differentiation GO:0030182 368 0.107
signal transduction by phosphorylation GO:0023014 144 0.100
metal ion transport GO:0030001 289 0.094
cell projection organization GO:0030030 302 0.091
response to oxygen levels GO:0070482 265 0.090
carbohydrate derivative metabolic process GO:1901135 346 0.089
regulation of phosphorus metabolic process GO:0051174 349 0.088
cellular chemical homeostasis GO:0055082 247 0.088
regulation of cell cycle GO:0051726 73 0.088
organic substance catabolic process GO:1901575 316 0.087
macromolecular complex subunit organization GO:0043933 339 0.086
single organism catabolic process GO:0044712 283 0.086
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.086
response to acid chemical GO:0001101 222 0.084
nucleoside metabolic process GO:0009116 179 0.083
response to cytokine GO:0034097 215 0.081
homeostatic process GO:0042592 331 0.079
regulation of proteasomal protein catabolic process GO:0061136 4 0.070
cellular response to oxygen containing compound GO:1901701 386 0.069
regulation of phosphorylation GO:0042325 248 0.069
mapk cascade GO:0000165 140 0.067
cell part morphogenesis GO:0032990 123 0.063
cellular response to stress GO:0033554 269 0.062
regulation of rna biosynthetic process GO:2001141 381 0.061
cellular amino acid metabolic process GO:0006520 107 0.058
cellular component biogenesis GO:0044085 368 0.058
cellular homeostasis GO:0019725 252 0.057
regulation of response to stress GO:0080134 126 0.057
secretion GO:0046903 307 0.057
regulation of intracellular signal transduction GO:1902531 218 0.056
glycosyl compound metabolic process GO:1901657 182 0.056
amine metabolic process GO:0009308 38 0.056
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.054
positive regulation of rna biosynthetic process GO:1902680 197 0.054
macromolecular complex assembly GO:0065003 273 0.054
cellular catabolic process GO:0044248 295 0.054
neuron projection development GO:0031175 273 0.053
nitrogen compound transport GO:0071705 229 0.053
reproductive process GO:0022414 372 0.052
oxoacid metabolic process GO:0043436 290 0.051
organophosphate metabolic process GO:0019637 370 0.051
response to peptide hormone GO:0043434 278 0.051
response to nutrient GO:0007584 248 0.050
neurological system process GO:0050877 219 0.050
response to oxidative stress GO:0006979 186 0.050
response to reactive oxygen species GO:0000302 120 0.050
lipid metabolic process GO:0006629 283 0.049
biological adhesion GO:0022610 110 0.049
nucleobase containing small molecule metabolic process GO:0055086 316 0.048
cation transport GO:0006812 382 0.048
coenzyme metabolic process GO:0006732 86 0.048
neuron development GO:0048666 286 0.047
regulation of transcription dna templated GO:0006355 374 0.047
purine ribonucleoside metabolic process GO:0046128 168 0.046
single organism biosynthetic process GO:0044711 342 0.046
positive regulation of gene expression GO:0010628 244 0.046
response to inorganic substance GO:0010035 377 0.046
catabolic process GO:0009056 351 0.046
regulation of phosphate metabolic process GO:0019220 349 0.045
rhythmic process GO:0048511 156 0.045
response to carbohydrate GO:0009743 183 0.044
cellular amine metabolic process GO:0044106 38 0.044
regulation of mapk cascade GO:0043408 116 0.044
regulation of cell motility GO:2000145 131 0.043
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.043
cellular response to insulin stimulus GO:0032869 81 0.043
cognition GO:0050890 92 0.043
response to bacterium GO:0009617 200 0.043
programmed cell death GO:0012501 392 0.043
defense response GO:0006952 194 0.042
nucleic acid templated transcription GO:0097659 379 0.042
intracellular signal transduction GO:0035556 314 0.041
carbohydrate homeostasis GO:0033500 75 0.041
single organism organelle organization GO:1902589 180 0.040
cation homeostasis GO:0055080 195 0.040
cellular component movement GO:0006928 248 0.040
reproduction GO:0000003 245 0.040
inorganic ion transmembrane transport GO:0098660 229 0.039
nucleoside catabolic process GO:0009164 126 0.038
chemical homeostasis GO:0048878 292 0.038
positive regulation of cell communication GO:0010647 271 0.037
developmental process involved in reproduction GO:0003006 159 0.037
cell projection morphogenesis GO:0048858 123 0.037
learning or memory GO:0007611 90 0.036
multi organism reproductive process GO:0044703 262 0.036
amide transport GO:0042886 105 0.036
cellular cation homeostasis GO:0030003 180 0.035
secretion by cell GO:0032940 248 0.035
chemotaxis GO:0006935 66 0.035
response to monosaccharide GO:0034284 159 0.035
response to toxic substance GO:0009636 133 0.034
metal ion homeostasis GO:0055065 186 0.034
ribonucleoside metabolic process GO:0009119 174 0.034
carboxylic acid metabolic process GO:0019752 289 0.033
cellular response to hormone stimulus GO:0032870 247 0.033
ribonucleoside triphosphate catabolic process GO:0009203 122 0.033
positive regulation of protein metabolic process GO:0051247 178 0.033
response to hexose GO:0009746 144 0.033
transcription from rna polymerase ii promoter GO:0006366 252 0.033
cellular metal ion homeostasis GO:0006875 172 0.033
axon development GO:0061564 96 0.032
positive regulation of developmental process GO:0051094 283 0.032
protein complex assembly GO:0006461 263 0.032
regulation of cellular response to stress GO:0080135 49 0.032
positive regulation of cell migration GO:0030335 96 0.032
regulation of secretion GO:0051046 224 0.032
positive regulation of multicellular organismal process GO:0051240 387 0.032
response to lipopolysaccharide GO:0032496 191 0.032
regulation of cellular amino acid metabolic process GO:0006521 2 0.031
regulation of cell proliferation GO:0042127 359 0.031
regulation of cell development GO:0060284 263 0.031
brain development GO:0007420 247 0.031
regulation of cellular component organization GO:0051128 368 0.031
multi multicellular organism process GO:0044706 138 0.031
nucleoside phosphate metabolic process GO:0006753 283 0.030
generation of precursor metabolites and energy GO:0006091 62 0.030
response to glucose GO:0009749 136 0.030
protein complex subunit organization GO:0071822 302 0.030
regulation of rna metabolic process GO:0051252 391 0.030
regulation of catalytic activity GO:0050790 304 0.030
rna biosynthetic process GO:0032774 380 0.030
positive regulation of signaling GO:0023056 270 0.030
dephosphorylation GO:0016311 98 0.029
neuron projection morphogenesis GO:0048812 122 0.029
negative regulation of programmed cell death GO:0043069 183 0.029
protein complex biogenesis GO:0070271 263 0.029
positive regulation of cellular component organization GO:0051130 200 0.029
nucleotide metabolic process GO:0009117 279 0.029
cell morphogenesis involved in differentiation GO:0000904 119 0.029
regulation of anatomical structure size GO:0090066 135 0.028
endocytosis GO:0006897 84 0.028
regulation of cellular localization GO:0060341 263 0.028
ion homeostasis GO:0050801 212 0.028
cell migration GO:0016477 197 0.028
organelle organization GO:0006996 266 0.028
response to metal ion GO:0010038 253 0.028
regulation of molecular function GO:0065009 398 0.028
ribonucleotide metabolic process GO:0009259 231 0.028
regulation of apoptotic process GO:0042981 335 0.028
response to extracellular stimulus GO:0009991 380 0.028
cellular ion homeostasis GO:0006873 184 0.028
single organism behavior GO:0044708 130 0.028
positive regulation of cellular biosynthetic process GO:0031328 295 0.027
organophosphate catabolic process GO:0046434 148 0.027
positive regulation of apoptotic process GO:0043065 154 0.027
cellular response to nitrogen compound GO:1901699 210 0.027
regulation of smooth muscle cell proliferation GO:0048660 75 0.027
cellular ketone metabolic process GO:0042180 51 0.027
transmembrane transport GO:0055085 412 0.027
gland development GO:0048732 155 0.027
ribonucleoside triphosphate metabolic process GO:0009199 141 0.027
regulation of multicellular organismal development GO:2000026 376 0.026
regulation of cellular amine metabolic process GO:0033238 8 0.026
divalent inorganic cation homeostasis GO:0072507 165 0.026
response to purine containing compound GO:0014074 126 0.026
purine nucleoside metabolic process GO:0042278 169 0.026
regulation of secretion by cell GO:1903530 208 0.026
rna metabolic process GO:0016070 406 0.026
regulation of cellular component movement GO:0051270 150 0.025
cellular response to nitrite GO:0071250 2 0.025
regulation of protein metabolic process GO:0051246 289 0.025
response to nutrient levels GO:0031667 370 0.025
carboxylic acid biosynthetic process GO:0046394 83 0.025
response to vitamin GO:0033273 131 0.025
response to retinoic acid GO:0032526 63 0.025
aging GO:0007568 241 0.025
negative regulation of cell cycle phase transition GO:1901988 4 0.025
taxis GO:0042330 67 0.025
cell cycle checkpoint GO:0000075 2 0.024
multicellular organismal reproductive process GO:0048609 233 0.024
transforming growth factor beta3 production GO:0032907 2 0.024
response to peptide GO:1901652 292 0.024
cellular response to peptide GO:1901653 133 0.024
intracellular transport GO:0046907 185 0.024
muscle cell proliferation GO:0033002 84 0.024
regulation of signal transduction GO:0009966 318 0.023
regulation of nucleic acid templated transcription GO:1903506 380 0.023
regulation of protein phosphorylation GO:0001932 183 0.023
single organism reproductive process GO:0044702 297 0.023
response to external biotic stimulus GO:0043207 221 0.023
negative regulation of cell death GO:0060548 229 0.023
apoptotic process GO:0006915 381 0.023
dendrite morphogenesis GO:0048813 43 0.023
cellular component morphogenesis GO:0032989 155 0.023
response to transition metal nanoparticle GO:1990267 122 0.023
organonitrogen compound catabolic process GO:1901565 179 0.023
purine ribonucleoside catabolic process GO:0046130 124 0.023
negative regulation of transport GO:0051051 136 0.023
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.023
locomotion GO:0040011 237 0.023
divalent inorganic cation transport GO:0072511 134 0.023
regulation of cell projection organization GO:0031344 175 0.022
circadian rhythm GO:0007623 88 0.022
regulation of neuron differentiation GO:0045664 208 0.022
purine nucleoside catabolic process GO:0006152 124 0.022
reactive oxygen species metabolic process GO:0072593 37 0.022
positive regulation of nucleic acid templated transcription GO:1903508 197 0.022
transcription dna templated GO:0006351 377 0.022
regulation of cell differentiation GO:0045595 320 0.021
purine ribonucleotide metabolic process GO:0009150 227 0.021
cofactor metabolic process GO:0051186 95 0.021
localization of cell GO:0051674 202 0.021
response to other organism GO:0051707 220 0.021
multicellular organism reproduction GO:0032504 233 0.021
head development GO:0060322 247 0.021
regulation of embryonic development GO:0045995 2 0.020
regulation of system process GO:0044057 208 0.020
peptide transport GO:0015833 97 0.020
cellular response to reactive oxygen species GO:0034614 55 0.020
ras protein signal transduction GO:0007265 29 0.020
response to hydrogen peroxide GO:0042542 89 0.020
positive regulation of biosynthetic process GO:0009891 319 0.020
cation transmembrane transport GO:0098655 263 0.020
enzyme linked receptor protein signaling pathway GO:0007167 116 0.020
response to camp GO:0051591 91 0.020
detection of chemical stimulus involved in sensory perception of bitter taste GO:0001580 4 0.020
regulation of organelle organization GO:0033043 80 0.020
negative regulation of mitotic cell cycle phase transition GO:1901991 3 0.020
regulation of neurogenesis GO:0050767 247 0.020
negative regulation of cell communication GO:0010648 158 0.020
response to glucocorticoid GO:0051384 223 0.019
regulation of cell migration GO:0030334 128 0.019
positive regulation of cellular component movement GO:0051272 102 0.019
positive regulation of hydrolase activity GO:0051345 86 0.019
nucleobase containing compound catabolic process GO:0034655 152 0.019
macromolecule localization GO:0033036 252 0.019
positive regulation of smooth muscle cell proliferation GO:0048661 51 0.019
response to alkaloid GO:0043279 132 0.019
divalent metal ion transport GO:0070838 132 0.019
cellular response to growth factor stimulus GO:0071363 162 0.019
ribose phosphate metabolic process GO:0019693 235 0.018
dendrite development GO:0016358 72 0.018
regulation of cellular ketone metabolic process GO:0010565 27 0.018
negative regulation of response to stimulus GO:0048585 155 0.018
response to corticosteroid GO:0031960 235 0.018
cellular response to organonitrogen compound GO:0071417 197 0.018
regulation of protein transport GO:0051223 68 0.018
purine containing compound metabolic process GO:0072521 253 0.018
circadian regulation of gene expression GO:0032922 3 0.018
monocarboxylic acid metabolic process GO:0032787 152 0.018
regulation of neuron projection development GO:0010975 161 0.018
smooth muscle cell proliferation GO:0048659 77 0.018
positive regulation of programmed cell death GO:0043068 157 0.018
organic cyclic compound catabolic process GO:1901361 175 0.018
positive regulation of cell death GO:0010942 184 0.018
negative regulation of biosynthetic process GO:0009890 168 0.018
nucleoside triphosphate metabolic process GO:0009141 144 0.018
cell morphogenesis GO:0000902 142 0.018
positive regulation of cell differentiation GO:0045597 217 0.018
positive regulation of transport GO:0051050 245 0.018
gtp metabolic process GO:0046039 72 0.018
immune response GO:0006955 104 0.018
regulation of peptide secretion GO:0002791 82 0.017
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.017
regulation of catabolic process GO:0009894 113 0.017
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.017
regulation of peptide transport GO:0090087 87 0.017
behavior GO:0007610 205 0.017
regulation of programmed cell death GO:0043067 341 0.017
positive regulation of neuron projection development GO:0010976 99 0.017
protein phosphorylation GO:0006468 345 0.017
regeneration GO:0031099 163 0.017
positive regulation of cell development GO:0010720 176 0.017
peptide secretion GO:0002790 86 0.017
regulation of carbohydrate catabolic process GO:0043470 14 0.017
response to tumor necrosis factor GO:0034612 56 0.017
negative regulation of apoptotic process GO:0043066 181 0.017
protein homooligomerization GO:0051260 91 0.017
response to growth factor GO:0070848 189 0.016
positive regulation of secretion by cell GO:1903532 128 0.016
carbohydrate derivative biosynthetic process GO:1901137 124 0.016
muscle structure development GO:0061061 87 0.016
negative regulation of stress activated protein kinase signaling cascade GO:0070303 4 0.016
positive regulation of transcription dna templated GO:0045893 197 0.016
purine ribonucleotide catabolic process GO:0009154 136 0.016
positive regulation of nervous system development GO:0051962 178 0.016
single organism intracellular transport GO:1902582 166 0.016
regulation of cellular protein metabolic process GO:0032268 267 0.016
positive regulation of cell proliferation GO:0008284 249 0.016
response to light stimulus GO:0009416 52 0.016
cytoskeleton dependent cytokinesis GO:0061640 2 0.015
purine nucleotide metabolic process GO:0006163 229 0.015
cellular response to peptide hormone stimulus GO:0071375 120 0.015
protein o linked glycosylation GO:0006493 2 0.015
protein transport GO:0015031 132 0.015
glucose homeostasis GO:0042593 75 0.015
positive regulation of phosphate metabolic process GO:0045937 262 0.015
cell motility GO:0048870 202 0.015
proteolysis GO:0006508 175 0.015
purine nucleoside triphosphate catabolic process GO:0009146 122 0.015
multicellular organism growth GO:0035264 1 0.015
single organism carbohydrate metabolic process GO:0044723 118 0.015
regulation of cellular catabolic process GO:0031329 101 0.015
positive regulation of cell projection organization GO:0031346 111 0.015
synaptic growth at neuromuscular junction GO:0051124 1 0.015
cell adhesion GO:0007155 110 0.015
muscle cell differentiation GO:0042692 52 0.014
vesicle mediated transport GO:0016192 181 0.014
response to biotic stimulus GO:0009607 226 0.014
cellular response to external stimulus GO:0071496 118 0.014
anatomical structure morphogenesis GO:0009653 298 0.014
reactive oxygen species biosynthetic process GO:1903409 8 0.014
protein oligomerization GO:0051259 191 0.014
mitotic cell cycle checkpoint GO:0007093 1 0.014
positive regulation of rna metabolic process GO:0051254 203 0.014
negative regulation of signaling GO:0023057 157 0.014
negative regulation of catalytic activity GO:0043086 103 0.014
insulin secretion GO:0030073 69 0.014
purine containing compound catabolic process GO:0072523 138 0.014
peptide hormone secretion GO:0030072 84 0.014
regulation of nervous system development GO:0051960 264 0.014
sulfur compound metabolic process GO:0006790 70 0.014
axonogenesis GO:0007409 71 0.014
gamete generation GO:0007276 124 0.014
mitotic spindle organization GO:0007052 2 0.014
positive regulation of neurogenesis GO:0050769 165 0.013
ribonucleoside catabolic process GO:0042454 126 0.013
regulation of protein modification process GO:0031399 194 0.013
small gtpase mediated signal transduction GO:0007264 36 0.013
immune system process GO:0002376 204 0.013
cellular response to hexose stimulus GO:0071331 65 0.013
cellular divalent inorganic cation homeostasis GO:0072503 162 0.013
regulation of ion transport GO:0043269 245 0.013
heterocycle catabolic process GO:0046700 167 0.013
regulation of cellular component biogenesis GO:0044087 86 0.013
potassium ion transport GO:0006813 97 0.013
carbohydrate derivative catabolic process GO:1901136 147 0.013
adult locomotory behavior GO:0008344 4 0.013
regulation of growth GO:0040008 105 0.013
axon cargo transport GO:0008088 1 0.013
cellular protein complex assembly GO:0043623 44 0.013
regulation of locomotion GO:0040012 148 0.013
developmental growth GO:0048589 100 0.013
muscle contraction GO:0006936 88 0.013
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.013
regulation of hormone levels GO:0010817 187 0.012
positive regulation of cellular protein metabolic process GO:0032270 167 0.012
negative regulation of signal transduction GO:0009968 83 0.012
response to molecule of bacterial origin GO:0002237 194 0.012
negative regulation of stress activated mapk cascade GO:0032873 4 0.012
organonitrogen compound biosynthetic process GO:1901566 167 0.012
response to insulin GO:0032868 133 0.012
cellular nitrogen compound catabolic process GO:0044270 163 0.012
response to estrogen GO:0043627 232 0.012
hormone secretion GO:0046879 115 0.012
cell matrix adhesion GO:0007160 19 0.012
positive regulation of phosphorus metabolic process GO:0010562 262 0.012
regulation of cell adhesion GO:0030155 52 0.012
rna localization GO:0006403 4 0.012
calcium ion transport GO:0006816 131 0.012
ion transmembrane transport GO:0034220 365 0.011
growth GO:0040007 165 0.011
purine nucleotide catabolic process GO:0006195 136 0.011
signal release GO:0023061 145 0.011
pyruvate metabolic process GO:0006090 27 0.011
cytoplasmic transport GO:0016482 115 0.011
negative regulation of cellular metabolic process GO:0031324 281 0.011
regulation of metal ion transport GO:0010959 118 0.011
cellular response to cytokine stimulus GO:0071345 127 0.011
eye morphogenesis GO:0048592 4 0.011
wound healing GO:0042060 122 0.011
glycosyl compound catabolic process GO:1901658 126 0.011
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.011
purine nucleoside triphosphate metabolic process GO:0009144 141 0.011
neurotransmitter transport GO:0006836 42 0.011
small molecule biosynthetic process GO:0044283 124 0.011
erythrocyte differentiation GO:0030218 1 0.011
positive regulation of secretion GO:0051047 140 0.011
actin filament based process GO:0030029 86 0.011
necroptotic process GO:0070266 2 0.011
regulation of hydrolase activity GO:0051336 143 0.011
positive regulation of molecular function GO:0044093 230 0.011
response to ethanol GO:0045471 162 0.011
male gamete generation GO:0048232 99 0.011
developmental maturation GO:0021700 25 0.011
male sex differentiation GO:0046661 64 0.010
negative regulation of multicellular organismal process GO:0051241 203 0.010
response to ionizing radiation GO:0010212 59 0.010
spermatogenesis GO:0007283 99 0.010
dna integrity checkpoint GO:0031570 2 0.010
glutamate receptor signaling pathway GO:0007215 43 0.010
negative regulation of phosphate metabolic process GO:0045936 80 0.010
positive regulation of cellular amine metabolic process GO:0033240 3 0.010
cell cell signaling GO:0007267 335 0.010
ribonucleotide catabolic process GO:0009261 136 0.010
negative regulation of cell proliferation GO:0008285 119 0.010
positive regulation of locomotion GO:0040017 102 0.010
gonad development GO:0008406 104 0.010
rho protein signal transduction GO:0007266 11 0.010
reproductive system development GO:0061458 128 0.010
regulation of purine nucleotide metabolic process GO:1900542 115 0.010
regulation of cellular component size GO:0032535 51 0.010
response to mechanical stimulus GO:0009612 134 0.010

Ythdf3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.031
nervous system disease DOID:863 0 0.031
central nervous system disease DOID:331 0 0.012