Rattus norvegicus

0 known processes

Phf3

PHD finger protein 3

Phf3 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
positive regulation of cell communication GO:0010647 271 0.046
positive regulation of signaling GO:0023056 270 0.045
negative regulation of vascular permeability GO:0043116 3 0.037
regulation of programmed cell death GO:0043067 341 0.036
nucleic acid templated transcription GO:0097659 379 0.035
transcription dna templated GO:0006351 377 0.034
protein phosphorylation GO:0006468 345 0.033
protein complex assembly GO:0006461 263 0.033
response to molecule of bacterial origin GO:0002237 194 0.033
positive regulation of response to stimulus GO:0048584 285 0.032
cellular component biogenesis GO:0044085 368 0.032
rna biosynthetic process GO:0032774 380 0.029
cellular response to stress GO:0033554 269 0.028
positive regulation of signal transduction GO:0009967 175 0.028
regulation of signal transduction GO:0009966 318 0.027
lipid metabolic process GO:0006629 283 0.027
small gtpase mediated signal transduction GO:0007264 36 0.027
regulation of protein metabolic process GO:0051246 289 0.026
regulation of apoptotic process GO:0042981 335 0.026
positive regulation of intracellular signal transduction GO:1902533 138 0.026
neurological system process GO:0050877 219 0.024
regulation of intracellular signal transduction GO:1902531 218 0.024
cellular response to oxygen containing compound GO:1901701 386 0.024
cellular amine metabolic process GO:0044106 38 0.023
cellular amino acid metabolic process GO:0006520 107 0.023
regulation of nucleic acid templated transcription GO:1903506 380 0.023
macromolecular complex subunit organization GO:0043933 339 0.023
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.023
negative regulation of apoptotic process GO:0043066 181 0.022
cellular component assembly GO:0022607 360 0.022
negative regulation of metabolic process GO:0009892 331 0.022
apoptotic process GO:0006915 381 0.022
protein complex subunit organization GO:0071822 302 0.022
central nervous system development GO:0007417 311 0.022
cation transmembrane transport GO:0098655 263 0.021
vascular process in circulatory system GO:0003018 96 0.020
single organism intracellular transport GO:1902582 166 0.020
ras protein signal transduction GO:0007265 29 0.020
single organism reproductive process GO:0044702 297 0.020
response to ethanol GO:0045471 162 0.020
cation transport GO:0006812 382 0.020
cellular lipid metabolic process GO:0044255 208 0.019
negative regulation of cellular metabolic process GO:0031324 281 0.019
regulation of cellular amino acid metabolic process GO:0006521 2 0.019
cellular homeostasis GO:0019725 252 0.019
response to bacterium GO:0009617 200 0.019
response to oxygen levels GO:0070482 265 0.019
regulation of cellular component organization GO:0051128 368 0.019
intracellular signal transduction GO:0035556 314 0.019
organic acid metabolic process GO:0006082 292 0.019
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.018
amine metabolic process GO:0009308 38 0.018
response to carbohydrate GO:0009743 183 0.018
blood circulation GO:0008015 183 0.018
cellular ketone metabolic process GO:0042180 51 0.018
transmembrane transport GO:0055085 412 0.018
oxoacid metabolic process GO:0043436 290 0.018
intracellular transport GO:0046907 185 0.018
double strand break repair GO:0006302 1 0.018
cellular protein localization GO:0034613 122 0.018
single organism organelle organization GO:1902589 180 0.017
response to lipopolysaccharide GO:0032496 191 0.017
response to acetate GO:0010034 3 0.017
negative regulation of macromolecule metabolic process GO:0010605 260 0.017
cellular component movement GO:0006928 248 0.017
circulatory system process GO:0003013 183 0.017
macromolecular complex assembly GO:0065003 273 0.017
cell cell signaling GO:0007267 335 0.017
negative regulation of programmed cell death GO:0043069 183 0.017
lipid biosynthetic process GO:0008610 128 0.016
regulation of rna biosynthetic process GO:2001141 381 0.016
rna metabolic process GO:0016070 406 0.016
regulation of cellular amine metabolic process GO:0033238 8 0.016
protein ubiquitination GO:0016567 28 0.016
nitrogen compound transport GO:0071705 229 0.016
defense response GO:0006952 194 0.016
organelle organization GO:0006996 266 0.016
response to decreased oxygen levels GO:0036293 237 0.015
regulation of cell differentiation GO:0045595 320 0.015
response to monosaccharide GO:0034284 159 0.015
regulation of catalytic activity GO:0050790 304 0.015
protein complex biogenesis GO:0070271 263 0.015
response to other organism GO:0051707 220 0.015
ion transmembrane transport GO:0034220 365 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.015
homeostatic process GO:0042592 331 0.015
response to extracellular stimulus GO:0009991 380 0.015
regulation of membrane potential GO:0042391 110 0.015
regulation of molecular function GO:0065009 398 0.015
response to acid chemical GO:0001101 222 0.014
regulation of phosphate metabolic process GO:0019220 349 0.014
negative regulation of rna biosynthetic process GO:1902679 118 0.014
cytoplasmic transport GO:0016482 115 0.014
localization of cell GO:0051674 202 0.014
positive regulation of molecular function GO:0044093 230 0.014
response to corticosteroid GO:0031960 235 0.014
regulation of rna metabolic process GO:0051252 391 0.014
head development GO:0060322 247 0.014
regulation of transcription dna templated GO:0006355 374 0.014
phospholipid metabolic process GO:0006644 61 0.014
regulation of cell projection organization GO:0031344 175 0.014
cell motility GO:0048870 202 0.013
rho protein signal transduction GO:0007266 11 0.013
response to glucose GO:0009749 136 0.013
multicellular organismal reproductive process GO:0048609 233 0.013
cation homeostasis GO:0055080 195 0.013
positive regulation of cellular amine metabolic process GO:0033240 3 0.013
response to growth factor GO:0070848 189 0.013
negative regulation of rna metabolic process GO:0051253 123 0.013
response to reactive oxygen species GO:0000302 120 0.013
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.013
response to hexose GO:0009746 144 0.013
neuron differentiation GO:0030182 368 0.013
carbohydrate derivative metabolic process GO:1901135 346 0.013
chemical homeostasis GO:0048878 292 0.013
macromolecule localization GO:0033036 252 0.013
divalent inorganic cation homeostasis GO:0072507 165 0.012
response to hypoxia GO:0001666 231 0.012
carboxylic acid metabolic process GO:0019752 289 0.012
negative regulation of gene expression GO:0010629 199 0.012
metal ion transport GO:0030001 289 0.012
cellular response to growth factor stimulus GO:0071363 162 0.012
action potential GO:0001508 54 0.012
regulation of cellular ketone metabolic process GO:0010565 27 0.012
regulation of cell proliferation GO:0042127 359 0.012
aging GO:0007568 241 0.012
regulation of canonical wnt signaling pathway GO:0060828 4 0.012
carbohydrate derivative biosynthetic process GO:1901137 124 0.012
anatomical structure morphogenesis GO:0009653 298 0.012
brain development GO:0007420 247 0.012
response to inorganic substance GO:0010035 377 0.011
response to amino acid GO:0043200 75 0.011
ion homeostasis GO:0050801 212 0.011
regulation of hormone secretion GO:0046883 106 0.011
negative regulation of cell death GO:0060548 229 0.011
glycerophospholipid metabolic process GO:0006650 47 0.011
neuronal action potential GO:0019228 35 0.011
secretion GO:0046903 307 0.011
response to metal ion GO:0010038 253 0.011
dephosphorylation GO:0016311 98 0.011
response to nutrient levels GO:0031667 370 0.011
locomotion GO:0040011 237 0.011
regulation of peptide transport GO:0090087 87 0.011
positive regulation of gene expression GO:0010628 244 0.011
multicellular organism reproduction GO:0032504 233 0.011
reproduction GO:0000003 245 0.011
positive regulation of biosynthetic process GO:0009891 319 0.011
lipid modification GO:0030258 52 0.011
regulation of cellular localization GO:0060341 263 0.011
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.010
regulation of secretion by cell GO:1903530 208 0.010
hormone secretion GO:0046879 115 0.010
response to biotic stimulus GO:0009607 226 0.010
neuron death GO:0070997 127 0.010

Phf3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.029
nervous system disease DOID:863 0 0.029
central nervous system disease DOID:331 0 0.017
myopathy DOID:423 0 0.010
muscular disease DOID:0080000 0 0.010
musculoskeletal system disease DOID:17 0 0.010
muscle tissue disease DOID:66 0 0.010