Rattus norvegicus

0 known processes

Synm

synemin, intermediate filament protein

(Aliases: Dmn)

Synm biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
anatomical structure morphogenesis GO:0009653 298 0.147
Rat
cell projection organization GO:0030030 302 0.110
Rat
cell part morphogenesis GO:0032990 123 0.089
Rat
transmembrane transport GO:0055085 412 0.087
cell projection morphogenesis GO:0048858 123 0.066
Rat
regulation of molecular function GO:0065009 398 0.066
cellular component morphogenesis GO:0032989 155 0.060
Rat
neuron projection morphogenesis GO:0048812 122 0.058
Rat
regulation of cell development GO:0060284 263 0.056
Rat
neuron projection development GO:0031175 273 0.055
Rat
regulation of anatomical structure morphogenesis GO:0022603 141 0.052
Rat
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.051
response to bacterium GO:0009617 200 0.050
anterior posterior pattern specification GO:0009952 1 0.050
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.050
cell morphogenesis GO:0000902 142 0.049
Rat
regulation of neuron differentiation GO:0045664 208 0.045
Rat
nucleotide metabolic process GO:0009117 279 0.045
inorganic cation transmembrane transport GO:0098662 202 0.043
neuron development GO:0048666 286 0.043
Rat
multi multicellular organism process GO:0044706 138 0.043
Rat
regulation of cell morphogenesis GO:0022604 77 0.042
Rat
regulation of cell projection organization GO:0031344 175 0.041
Rat
positive regulation of biosynthetic process GO:0009891 319 0.039
positive regulation of multicellular organismal process GO:0051240 387 0.038
Rat
protein phosphorylation GO:0006468 345 0.038
regulation of phosphate metabolic process GO:0019220 349 0.037
negative regulation of multicellular organismal process GO:0051241 203 0.037
cellular component movement GO:0006928 248 0.036
Rat
response to hypoxia GO:0001666 231 0.036
regulation of cell morphogenesis involved in differentiation GO:0010769 72 0.036
Rat
circulatory system development GO:0072359 134 0.035
positive regulation of response to stimulus GO:0048584 285 0.035
growth GO:0040007 165 0.035
Rat
transcription dna templated GO:0006351 377 0.035
regulation of neuron projection development GO:0010975 161 0.034
Rat
catabolic process GO:0009056 351 0.034
regulation of cellular component organization GO:0051128 368 0.033
Rat
carbohydrate derivative metabolic process GO:1901135 346 0.033
nucleobase containing small molecule metabolic process GO:0055086 316 0.033
positive regulation of developmental process GO:0051094 283 0.033
Rat
positive regulation of phosphorus metabolic process GO:0010562 262 0.032
rna biosynthetic process GO:0032774 380 0.032
positive regulation of cellular biosynthetic process GO:0031328 295 0.032
cell morphogenesis involved in differentiation GO:0000904 119 0.031
Rat
positive regulation of cell proliferation GO:0008284 249 0.031
Rat
positive regulation of nucleotide metabolic process GO:0045981 91 0.031
regulation of nervous system development GO:0051960 264 0.031
Rat
reproductive process GO:0022414 372 0.030
Rat
cellular amino acid metabolic process GO:0006520 107 0.030
intracellular signal transduction GO:0035556 314 0.030
regulation of system process GO:0044057 208 0.030
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.030
Rat
cardiovascular system development GO:0072358 134 0.030
protein localization GO:0008104 191 0.029
cellular amine metabolic process GO:0044106 38 0.029
regulation of phosphorus metabolic process GO:0051174 349 0.029
regulation of cell proliferation GO:0042127 359 0.029
Rat
negative regulation of metabolic process GO:0009892 331 0.029
nucleoside phosphate metabolic process GO:0006753 283 0.028
negative regulation of cell differentiation GO:0045596 99 0.028
muscle structure development GO:0061061 87 0.027
regulation of cellular amino acid metabolic process GO:0006521 2 0.027
motor neuron axon guidance GO:0008045 1 0.027
amine metabolic process GO:0009308 38 0.027
positive regulation of gene expression GO:0010628 244 0.026
regulation of cell growth GO:0001558 85 0.026
cellular macromolecule localization GO:0070727 122 0.026
response to peptide hormone GO:0043434 278 0.026
Rat
regulation of nucleic acid templated transcription GO:1903506 380 0.025
single organism cellular localization GO:1902580 102 0.025
action potential GO:0001508 54 0.025
ribose phosphate metabolic process GO:0019693 235 0.025
dendrite development GO:0016358 72 0.025
metal ion transport GO:0030001 289 0.025
response to biotic stimulus GO:0009607 226 0.025
negative regulation of macromolecule metabolic process GO:0010605 260 0.024
regulation of programmed cell death GO:0043067 341 0.024
rhythmic process GO:0048511 156 0.024
positive regulation of cell differentiation GO:0045597 217 0.024
Rat
response to peptide GO:1901652 292 0.024
Rat
single organism reproductive process GO:0044702 297 0.024
Rat
response to external biotic stimulus GO:0043207 221 0.024
tissue development GO:0009888 252 0.024
Rat
cellular ketone metabolic process GO:0042180 51 0.023
response to inorganic substance GO:0010035 377 0.023
Rat
regulation of phosphorylation GO:0042325 248 0.023
nucleic acid templated transcription GO:0097659 379 0.023
regulation of locomotion GO:0040012 148 0.023
Rat
regulation of canonical wnt signaling pathway GO:0060828 4 0.023
response to oxygen levels GO:0070482 265 0.023
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.023
regulation of cell differentiation GO:0045595 320 0.022
Rat
multicellular organism reproduction GO:0032504 233 0.022
Rat
positive regulation of nervous system development GO:0051962 178 0.022
Rat
organic acid metabolic process GO:0006082 292 0.022
regulation of multicellular organismal development GO:2000026 376 0.022
Rat
negative regulation of developmental process GO:0051093 125 0.022
cellular catabolic process GO:0044248 295 0.022
heart morphogenesis GO:0003007 3 0.022
negative regulation of cell proliferation GO:0008285 119 0.022
response to lipopolysaccharide GO:0032496 191 0.022
regulation of intracellular signal transduction GO:1902531 218 0.022
small gtpase mediated signal transduction GO:0007264 36 0.021
response to other organism GO:0051707 220 0.021
regulation of cellular localization GO:0060341 263 0.021
rna metabolic process GO:0016070 406 0.021
response to radiation GO:0009314 137 0.021
Rat
regulation of growth GO:0040008 105 0.021
single organism intracellular transport GO:1902582 166 0.021
gliogenesis GO:0042063 93 0.021
Rat
organ formation GO:0048645 3 0.021
response to metal ion GO:0010038 253 0.021
Rat
organophosphate metabolic process GO:0019637 370 0.020
regulation of cellular amine metabolic process GO:0033238 8 0.020
cellular component assembly GO:0022607 360 0.020
Rat
cellular response to oxygen containing compound GO:1901701 386 0.020
regulation of cellular protein metabolic process GO:0032268 267 0.020
heart development GO:0007507 72 0.020
cation transport GO:0006812 382 0.020
gland development GO:0048732 155 0.020
axis specification GO:0009798 4 0.020
axon development GO:0061564 96 0.020
Rat
regulation of protein metabolic process GO:0051246 289 0.020
ras protein signal transduction GO:0007265 29 0.020
single organism catabolic process GO:0044712 283 0.020
regulation of cellular ketone metabolic process GO:0010565 27 0.019
positive regulation of phosphate metabolic process GO:0045937 262 0.019
axonogenesis GO:0007409 71 0.019
Rat
purine containing compound metabolic process GO:0072521 253 0.019
regulation of rna metabolic process GO:0051252 391 0.019
neuron differentiation GO:0030182 368 0.019
Rat
monovalent inorganic cation transport GO:0015672 172 0.019
sex differentiation GO:0007548 113 0.019
regulation of transcription dna templated GO:0006355 374 0.019
purine ribonucleotide metabolic process GO:0009150 227 0.019
oxoacid metabolic process GO:0043436 290 0.019
regulation of rna biosynthetic process GO:2001141 381 0.019
negative regulation of cellular metabolic process GO:0031324 281 0.019
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.019
ribonucleotide metabolic process GO:0009259 231 0.019
cell motility GO:0048870 202 0.019
Rat
intracellular protein transport GO:0006886 79 0.018
single organism biosynthetic process GO:0044711 342 0.018
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.018
negative regulation of cell development GO:0010721 82 0.018
positive regulation of transport GO:0051050 245 0.018
cellular response to nitrogen compound GO:1901699 210 0.018
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.018
purine nucleotide metabolic process GO:0006163 229 0.018
cation transmembrane transport GO:0098655 263 0.018
cellular protein localization GO:0034613 122 0.018
muscle tissue development GO:0060537 58 0.018
nucleoside phosphate biosynthetic process GO:1901293 102 0.018
intracellular transport GO:0046907 185 0.018
multi organism reproductive process GO:0044703 262 0.018
Rat
transmission of nerve impulse GO:0019226 42 0.018
positive regulation of transcription dna templated GO:0045893 197 0.018
regulation of muscle system process GO:0090257 79 0.017
regulation of response to wounding GO:1903034 69 0.017
reproduction GO:0000003 245 0.017
Rat
regulation of response to stress GO:0080134 126 0.017
programmed cell death GO:0012501 392 0.017
organic substance catabolic process GO:1901575 316 0.017
gonad development GO:0008406 104 0.017
locomotion GO:0040011 237 0.017
Rat
protein transport GO:0015031 132 0.017
positive regulation of cell development GO:0010720 176 0.017
Rat
behavior GO:0007610 205 0.017
regulation of immune system process GO:0002682 123 0.017
regulation of nucleotide metabolic process GO:0006140 117 0.017
glial cell differentiation GO:0010001 65 0.017
neuronal action potential GO:0019228 35 0.016
regulation of catalytic activity GO:0050790 304 0.016
positive regulation of catalytic activity GO:0043085 184 0.016
response to decreased oxygen levels GO:0036293 237 0.016
carbohydrate derivative biosynthetic process GO:1901137 124 0.016
ion homeostasis GO:0050801 212 0.016
nucleoside metabolic process GO:0009116 179 0.016
peptidyl tyrosine phosphorylation GO:0018108 72 0.016
blood circulation GO:0008015 183 0.016
circulatory system process GO:0003013 183 0.016
neuromuscular process GO:0050905 2 0.016
macromolecular complex subunit organization GO:0043933 339 0.016
Rat
developmental growth GO:0048589 100 0.016
Rat
regulation of neurogenesis GO:0050767 247 0.016
Rat
cell growth GO:0016049 104 0.016
aging GO:0007568 241 0.016
Rat
positive regulation of molecular function GO:0044093 230 0.016
positive regulation of signal transduction GO:0009967 175 0.016
organonitrogen compound catabolic process GO:1901565 179 0.016
positive regulation of rna metabolic process GO:0051254 203 0.016
regulation of catabolic process GO:0009894 113 0.016
cardiac chamber development GO:0003205 1 0.016
inorganic ion transmembrane transport GO:0098660 229 0.016
secretion by cell GO:0032940 248 0.016
salivary gland development GO:0007431 3 0.016
carbohydrate derivative catabolic process GO:1901136 147 0.016
dephosphorylation GO:0016311 98 0.016
heterocycle catabolic process GO:0046700 167 0.016
immune system process GO:0002376 204 0.015
positive regulation of neurogenesis GO:0050769 165 0.015
Rat
negative regulation of cellular protein metabolic process GO:0032269 106 0.015
protein complex assembly GO:0006461 263 0.015
Rat
central nervous system development GO:0007417 311 0.015
regulation of anatomical structure size GO:0090066 135 0.015
response to nutrient GO:0007584 248 0.015
Rat
peptidyl amino acid modification GO:0018193 126 0.015
positive regulation of nucleic acid templated transcription GO:1903508 197 0.015
carboxylic acid metabolic process GO:0019752 289 0.015
ribonucleotide catabolic process GO:0009261 136 0.015
regulation of cellular catabolic process GO:0031329 101 0.015
positive regulation of cellular amine metabolic process GO:0033240 3 0.015
actin filament based process GO:0030029 86 0.015
mesoderm development GO:0007498 2 0.015
regulation of signal transduction GO:0009966 318 0.015
secretion GO:0046903 307 0.015
cellular nitrogen compound catabolic process GO:0044270 163 0.015
ion transmembrane transport GO:0034220 365 0.015
cardiac ventricle development GO:0003231 1 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.015
regulation of membrane potential GO:0042391 110 0.015
cytoplasmic transport GO:0016482 115 0.014
nucleobase containing compound catabolic process GO:0034655 152 0.014
apoptotic process GO:0006915 381 0.014
positive regulation of protein metabolic process GO:0051247 178 0.014
cellular response to stress GO:0033554 269 0.014
regulation of proteasomal protein catabolic process GO:0061136 4 0.014
reproductive structure development GO:0048608 128 0.014
Rat
membrane organization GO:0061024 94 0.014
muscle system process GO:0003012 115 0.014
liver development GO:0001889 90 0.014
neurological system process GO:0050877 219 0.014
oxidation reduction process GO:0055114 304 0.014
purine containing compound catabolic process GO:0072523 138 0.014
response to transition metal nanoparticle GO:1990267 122 0.014
Rat
cellular component biogenesis GO:0044085 368 0.014
Rat
regulation of hormone levels GO:0010817 187 0.013
negative regulation of neurogenesis GO:0050768 78 0.013
regulation of response to external stimulus GO:0032101 106 0.013
regulation of organ formation GO:0003156 2 0.013
response to nutrient levels GO:0031667 370 0.013
Rat
regulation of stem cell differentiation GO:2000736 2 0.013
negative regulation of cell communication GO:0010648 158 0.013
reproductive system development GO:0061458 128 0.013
Rat
response to cytokine GO:0034097 215 0.013
chemical homeostasis GO:0048878 292 0.013
embryonic pattern specification GO:0009880 1 0.013
peptide transport GO:0015833 97 0.013
positive regulation of secretion GO:0051047 140 0.013
circadian rhythm GO:0007623 88 0.013
positive regulation of cell projection organization GO:0031346 111 0.013
regeneration GO:0031099 163 0.013
Rat
establishment of protein localization GO:0045184 141 0.013
negative regulation of cellular component organization GO:0051129 83 0.013
positive regulation of catabolic process GO:0009896 78 0.013
organonitrogen compound biosynthetic process GO:1901566 167 0.013
protein targeting GO:0006605 61 0.013
response to insulin GO:0032868 133 0.012
response to molecule of bacterial origin GO:0002237 194 0.012
regulation of intracellular transport GO:0032386 65 0.012
negative regulation of response to stimulus GO:0048585 155 0.012
protein complex biogenesis GO:0070271 263 0.012
Rat
regulation of dendrite development GO:0050773 59 0.012
multicellular organismal reproductive process GO:0048609 233 0.012
Rat
organelle organization GO:0006996 266 0.012
Rat
negative regulation of protein metabolic process GO:0051248 114 0.012
positive regulation of neuron projection development GO:0010976 99 0.012
s shaped body morphogenesis GO:0072050 2 0.012
regulation of hydrolase activity GO:0051336 143 0.012
proteolysis GO:0006508 175 0.012
negative regulation of neuron differentiation GO:0045665 62 0.012
nucleoside catabolic process GO:0009164 126 0.012
brain development GO:0007420 247 0.012
regulation of establishment of protein localization GO:0070201 69 0.012
multicellular organismal signaling GO:0035637 44 0.012
negative regulation of gene expression GO:0010629 199 0.012
negative regulation of canonical wnt signaling pathway GO:0090090 4 0.012
single organism behavior GO:0044708 130 0.012
gastrulation GO:0007369 2 0.012
purine nucleoside triphosphate metabolic process GO:0009144 141 0.012
regulation of protein modification process GO:0031399 194 0.012
ovulation cycle GO:0042698 67 0.012
positive regulation of neuron differentiation GO:0045666 126 0.012
purine ribonucleoside metabolic process GO:0046128 168 0.012
cellular response to abiotic stimulus GO:0071214 85 0.012
regulation of protein localization GO:0032880 81 0.012
purine nucleotide catabolic process GO:0006195 136 0.012
regulation of protein phosphorylation GO:0001932 183 0.011
positive regulation of programmed cell death GO:0043068 157 0.011
negative regulation of molecular function GO:0044092 133 0.011
single organism membrane organization GO:0044802 74 0.011
purine ribonucleotide catabolic process GO:0009154 136 0.011
positive regulation of rna biosynthetic process GO:1902680 197 0.011
developmental process involved in reproduction GO:0003006 159 0.011
Rat
positive regulation of apoptotic process GO:0043065 154 0.011
regulation of cell motility GO:2000145 131 0.011
Rat
head development GO:0060322 247 0.011
cell adhesion GO:0007155 110 0.011
nucleoside triphosphate metabolic process GO:0009141 144 0.011
organic cyclic compound catabolic process GO:1901361 175 0.011
ribose phosphate biosynthetic process GO:0046390 87 0.011
transcription from rna polymerase ii promoter GO:0006366 252 0.011
startle response GO:0001964 2 0.011
metal ion homeostasis GO:0055065 186 0.011
homeostatic process GO:0042592 331 0.011
cellular response to external stimulus GO:0071496 118 0.011
regulation of homeostatic process GO:0032844 101 0.011
cell cycle checkpoint GO:0000075 2 0.011
defense response to gram negative bacterium GO:0050829 3 0.011
regulation of nucleotide biosynthetic process GO:0030808 47 0.011
sodium ion transport GO:0006814 82 0.011
negative regulation of biosynthetic process GO:0009890 168 0.011
lymphoid progenitor cell differentiation GO:0002320 2 0.011
endomembrane system organization GO:0010256 48 0.010
cellular response to endogenous stimulus GO:0071495 377 0.010
Rat
camp metabolic process GO:0046058 63 0.010
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.010
response to oxidative stress GO:0006979 186 0.010
cell cycle GO:0007049 101 0.010
synaptic transmission GO:0007268 235 0.010
embryonic axis specification GO:0000578 1 0.010
response to extracellular stimulus GO:0009991 380 0.010
Rat
peptide secretion GO:0002790 86 0.010
negative regulation of mitotic cell cycle phase transition GO:1901991 3 0.010
myelination GO:0042552 39 0.010
neuron death GO:0070997 127 0.010
transmembrane receptor protein tyrosine kinase signaling pathway GO:0007169 85 0.010
positive regulation of phosphorylation GO:0042327 177 0.010
positive regulation of cellular catabolic process GO:0031331 71 0.010
negative regulation of cell cycle phase transition GO:1901988 4 0.010
cell migration GO:0016477 197 0.010
Rat
negative regulation of catalytic activity GO:0043086 103 0.010
regulation of muscle contraction GO:0006937 53 0.010
hematopoietic progenitor cell differentiation GO:0002244 2 0.010
defense response GO:0006952 194 0.010
regulation of purine nucleotide metabolic process GO:1900542 115 0.010

Synm disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.018
musculoskeletal system disease DOID:17 0 0.018
cardiovascular system disease DOID:1287 0 0.016
muscular disease DOID:0080000 0 0.012
muscle tissue disease DOID:66 0 0.012
myopathy DOID:423 0 0.011