Rattus norvegicus

0 known processes

Ythdf1

YTH domain family, member 1

Ythdf1 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
rna metabolic process GO:0016070 406 0.292
rna biosynthetic process GO:0032774 380 0.250
nucleic acid templated transcription GO:0097659 379 0.190
regulation of rna metabolic process GO:0051252 391 0.181
regulation of transcription dna templated GO:0006355 374 0.161
regulation of rna biosynthetic process GO:2001141 381 0.115
negative regulation of macromolecule metabolic process GO:0010605 260 0.104
regulation of nucleic acid templated transcription GO:1903506 380 0.099
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.097
transcription dna templated GO:0006351 377 0.097
negative regulation of cellular metabolic process GO:0031324 281 0.085
negative regulation of gene expression GO:0010629 199 0.081
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.080
negative regulation of metabolic process GO:0009892 331 0.079
negative regulation of rna metabolic process GO:0051253 123 0.069
regulation of phosphate metabolic process GO:0019220 349 0.064
organic acid metabolic process GO:0006082 292 0.061
negative regulation of cellular biosynthetic process GO:0031327 161 0.059
cellular response to endogenous stimulus GO:0071495 377 0.056
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.053
single organism reproductive process GO:0044702 297 0.052
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.051
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.051
regulation of phosphorus metabolic process GO:0051174 349 0.049
regulation of protein metabolic process GO:0051246 289 0.049
negative regulation of transcription dna templated GO:0045892 116 0.047
positive regulation of phosphate metabolic process GO:0045937 262 0.047
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.047
regulation of multicellular organismal development GO:2000026 376 0.046
negative regulation of rna biosynthetic process GO:1902679 118 0.045
negative regulation of nucleic acid templated transcription GO:1903507 117 0.041
reproductive process GO:0022414 372 0.040
positive regulation of rna metabolic process GO:0051254 203 0.040
response to growth factor GO:0070848 189 0.039
positive regulation of cell communication GO:0010647 271 0.038
positive regulation of cellular biosynthetic process GO:0031328 295 0.038
organelle organization GO:0006996 266 0.037
intracellular signal transduction GO:0035556 314 0.036
positive regulation of signaling GO:0023056 270 0.036
regulation of signal transduction GO:0009966 318 0.036
neuron development GO:0048666 286 0.036
enzyme linked receptor protein signaling pathway GO:0007167 116 0.035
cellular response to growth factor stimulus GO:0071363 162 0.034
negative regulation of transcription from rna polymerase ii promoter GO:0000122 75 0.034
macromolecular complex subunit organization GO:0043933 339 0.034
positive regulation of response to stimulus GO:0048584 285 0.033
transcription from rna polymerase ii promoter GO:0006366 252 0.033
positive regulation of phosphorus metabolic process GO:0010562 262 0.033
anatomical structure morphogenesis GO:0009653 298 0.032
multi organism reproductive process GO:0044703 262 0.032
immune system process GO:0002376 204 0.032
neuron differentiation GO:0030182 368 0.032
negative regulation of biosynthetic process GO:0009890 168 0.031
multicellular organism reproduction GO:0032504 233 0.031
regulation of cellular protein metabolic process GO:0032268 267 0.031
regulation of molecular function GO:0065009 398 0.031
single organism organelle organization GO:1902589 180 0.031
positive regulation of gene expression GO:0010628 244 0.030
positive regulation of biosynthetic process GO:0009891 319 0.030
cellular response to stress GO:0033554 269 0.030
cellular response to oxygen containing compound GO:1901701 386 0.030
regulation of cell differentiation GO:0045595 320 0.029
positive regulation of nucleic acid templated transcription GO:1903508 197 0.029
regulation of protein phosphorylation GO:0001932 183 0.029
multicellular organismal reproductive process GO:0048609 233 0.029
neuron projection development GO:0031175 273 0.029
cell projection organization GO:0030030 302 0.029
regulation of canonical wnt signaling pathway GO:0060828 4 0.028
regulation of neurogenesis GO:0050767 247 0.028
cellular ketone metabolic process GO:0042180 51 0.028
amine metabolic process GO:0009308 38 0.028
regulation of catalytic activity GO:0050790 304 0.028
axis specification GO:0009798 4 0.028
regulation of phosphorylation GO:0042325 248 0.027
single organism biosynthetic process GO:0044711 342 0.027
regulation of protein modification process GO:0031399 194 0.027
anterior posterior pattern specification GO:0009952 1 0.027
oxoacid metabolic process GO:0043436 290 0.027
reproduction GO:0000003 245 0.026
positive regulation of molecular function GO:0044093 230 0.026
cellular catabolic process GO:0044248 295 0.026
cellular component biogenesis GO:0044085 368 0.026
response to inorganic substance GO:0010035 377 0.025
regulation of cell proliferation GO:0042127 359 0.025
central nervous system development GO:0007417 311 0.024
regulation of cell development GO:0060284 263 0.024
positive regulation of rna biosynthetic process GO:1902680 197 0.024
positive regulation of transcription dna templated GO:0045893 197 0.024
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.024
regulation of cellular component organization GO:0051128 368 0.023
homeostatic process GO:0042592 331 0.023
positive regulation of protein metabolic process GO:0051247 178 0.023
positive regulation of developmental process GO:0051094 283 0.022
protein phosphorylation GO:0006468 345 0.022
regulation of neuron projection development GO:0010975 161 0.022
positive regulation of multicellular organismal process GO:0051240 387 0.022
regulation of cellular localization GO:0060341 263 0.022
cellular component assembly GO:0022607 360 0.022
regulation of proteasomal protein catabolic process GO:0061136 4 0.022
regulation of intracellular signal transduction GO:1902531 218 0.021
positive regulation of cell differentiation GO:0045597 217 0.021
positive regulation of catalytic activity GO:0043085 184 0.021
negative regulation of developmental process GO:0051093 125 0.021
response to nutrient levels GO:0031667 370 0.021
response to extracellular stimulus GO:0009991 380 0.021
locomotion GO:0040011 237 0.021
response to biotic stimulus GO:0009607 226 0.020
nucleobase containing small molecule metabolic process GO:0055086 316 0.020
regulation of cellular amine metabolic process GO:0033238 8 0.020
positive regulation of signal transduction GO:0009967 175 0.020
cellular amine metabolic process GO:0044106 38 0.020
carboxylic acid metabolic process GO:0019752 289 0.020
cellular amino acid metabolic process GO:0006520 107 0.020
cellular component movement GO:0006928 248 0.020
regulation of fat cell differentiation GO:0045598 3 0.020
developmental process involved in reproduction GO:0003006 159 0.020
regulation of cell projection organization GO:0031344 175 0.019
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.019
apoptotic process GO:0006915 381 0.019
regulation of nervous system development GO:0051960 264 0.019
regulation of cellular amino acid metabolic process GO:0006521 2 0.019
positive regulation of cell death GO:0010942 184 0.018
regulation of apoptotic process GO:0042981 335 0.018
regulation of programmed cell death GO:0043067 341 0.018
multicellular organism growth GO:0035264 1 0.018
carbohydrate derivative metabolic process GO:1901135 346 0.018
catabolic process GO:0009056 351 0.018
gonad development GO:0008406 104 0.018
embryonic pattern specification GO:0009880 1 0.018
regulation of response to stress GO:0080134 126 0.018
positive regulation of phosphorylation GO:0042327 177 0.018
defense response GO:0006952 194 0.018
response to radiation GO:0009314 137 0.017
signal transduction by phosphorylation GO:0023014 144 0.017
regulation of cellular ketone metabolic process GO:0010565 27 0.017
nucleotide metabolic process GO:0009117 279 0.017
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.017
proteolysis GO:0006508 175 0.017
macromolecule localization GO:0033036 252 0.017
reproductive structure development GO:0048608 128 0.017
negative regulation of molecular function GO:0044092 133 0.017
negative regulation of response to stimulus GO:0048585 155 0.017
lipid metabolic process GO:0006629 283 0.017
macromolecular complex assembly GO:0065003 273 0.017
dna metabolic process GO:0006259 96 0.017
positive regulation of cellular protein metabolic process GO:0032270 167 0.017
bmp signaling pathway GO:0030509 4 0.017
positive regulation of cellular amine metabolic process GO:0033240 3 0.016
gastrulation GO:0007369 2 0.016
protein localization GO:0008104 191 0.016
heart morphogenesis GO:0003007 3 0.016
regulation of anatomical structure morphogenesis GO:0022603 141 0.016
positive regulation of transport GO:0051050 245 0.016
positive regulation of cell development GO:0010720 176 0.016
regulation of hormone levels GO:0010817 187 0.016
immune response GO:0006955 104 0.016
lipid biosynthetic process GO:0008610 128 0.016
development of primary sexual characteristics GO:0045137 107 0.016
sex differentiation GO:0007548 113 0.015
negative regulation of protein metabolic process GO:0051248 114 0.015
response to transforming growth factor beta GO:0071559 46 0.015
regulation of neuron differentiation GO:0045664 208 0.015
negative regulation of multicellular organismal process GO:0051241 203 0.015
circulatory system development GO:0072359 134 0.015
response to metal ion GO:0010038 253 0.015
organic substance catabolic process GO:1901575 316 0.015
response to hexose GO:0009746 144 0.015
cellular response to nitrogen compound GO:1901699 210 0.015
positive regulation of protein phosphorylation GO:0001934 135 0.015
negative regulation of signaling GO:0023057 157 0.014
cellular component morphogenesis GO:0032989 155 0.014
transforming growth factor beta receptor signaling pathway GO:0007179 18 0.014
organophosphate metabolic process GO:0019637 370 0.014
cell migration GO:0016477 197 0.014
response to peptide GO:1901652 292 0.014
sexual reproduction GO:0019953 148 0.014
motor neuron axon guidance GO:0008045 1 0.014
positive regulation of neuron differentiation GO:0045666 126 0.014
response to lipopolysaccharide GO:0032496 191 0.014
positive regulation of intracellular signal transduction GO:1902533 138 0.014
negative regulation of cell death GO:0060548 229 0.014
programmed cell death GO:0012501 392 0.014
positive regulation of programmed cell death GO:0043068 157 0.013
chromosome organization GO:0051276 36 0.013
rhythmic process GO:0048511 156 0.013
positive regulation of fat cell differentiation GO:0045600 2 0.013
regulation of secretion GO:0051046 224 0.013
purine containing compound metabolic process GO:0072521 253 0.013
cell morphogenesis involved in differentiation GO:0000904 119 0.013
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.013
metal ion transport GO:0030001 289 0.013
negative regulation of canonical wnt signaling pathway GO:0090090 4 0.013
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.013
anion transport GO:0006820 178 0.013
cellular response to transforming growth factor beta stimulus GO:0071560 41 0.013
metal ion homeostasis GO:0055065 186 0.013
regulation of dendrite development GO:0050773 59 0.013
negative regulation of signal transduction GO:0009968 83 0.012
negative regulation of mitotic cell cycle phase transition GO:1901991 3 0.012
cell cycle checkpoint GO:0000075 2 0.012
positive regulation of neurogenesis GO:0050769 165 0.012
positive regulation of protein modification process GO:0031401 142 0.012
ion transmembrane transport GO:0034220 365 0.012
tissue development GO:0009888 252 0.012
embryonic axis specification GO:0000578 1 0.012
response to peptide hormone GO:0043434 278 0.012
stress activated protein kinase signaling cascade GO:0031098 37 0.012
cellular chemical homeostasis GO:0055082 247 0.012
negative regulation of cell communication GO:0010648 158 0.012
ion homeostasis GO:0050801 212 0.012
protein complex biogenesis GO:0070271 263 0.012
response to bacterium GO:0009617 200 0.012
localization of cell GO:0051674 202 0.012
cytoskeleton organization GO:0007010 111 0.012
inorganic cation transmembrane transport GO:0098662 202 0.012
transmembrane transport GO:0055085 412 0.012
brain development GO:0007420 247 0.012
negative regulation of cell proliferation GO:0008285 119 0.011
stress activated mapk cascade GO:0051403 35 0.011
histone h3 acetylation GO:0043966 2 0.011
cellular response to hormone stimulus GO:0032870 247 0.011
regulation of stress activated mapk cascade GO:0032872 23 0.011
regulation of cell cycle GO:0051726 73 0.011
axon development GO:0061564 96 0.011
response to carbohydrate GO:0009743 183 0.011
synaptic transmission GO:0007268 235 0.011
mapk cascade GO:0000165 140 0.011
regulation of growth GO:0040008 105 0.011
intracellular transport GO:0046907 185 0.011
calcium ion homeostasis GO:0055074 162 0.011
ras protein signal transduction GO:0007265 29 0.011
growth GO:0040007 165 0.011
response to wounding GO:0009611 254 0.011
response to molecule of bacterial origin GO:0002237 194 0.011
regulation of response to external stimulus GO:0032101 106 0.011
negative regulation of programmed cell death GO:0043069 183 0.011
response to glucose GO:0009749 136 0.011
embryo development GO:0009790 49 0.011
regulation of cellular catabolic process GO:0031329 101 0.011
muscle system process GO:0003012 115 0.011
head development GO:0060322 247 0.011
cardiac ventricle development GO:0003231 1 0.010
response to monosaccharide GO:0034284 159 0.010
protein complex assembly GO:0006461 263 0.010
ribose phosphate metabolic process GO:0019693 235 0.010
regulation of metal ion transport GO:0010959 118 0.010
cation transport GO:0006812 382 0.010
neuron projection morphogenesis GO:0048812 122 0.010
reproductive system development GO:0061458 128 0.010
negative regulation of apoptotic process GO:0043066 181 0.010
divalent inorganic cation homeostasis GO:0072507 165 0.010
regulation of locomotion GO:0040012 148 0.010
regulation of cellular response to stress GO:0080135 49 0.010
negative regulation of cell development GO:0010721 82 0.010
regulation of mrna splicing via spliceosome GO:0048024 3 0.010
chemical homeostasis GO:0048878 292 0.010
adult locomotory behavior GO:0008344 4 0.010

Ythdf1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.024
musculoskeletal system disease DOID:17 0 0.024
nervous system disease DOID:863 0 0.011
connective tissue disease DOID:65 0 0.010