Rattus norvegicus

0 known processes

Clip3

CAP-GLY domain containing linker protein 3

(Aliases: RGD1306245)

Clip3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
neuron differentiation GO:0030182 368 0.050
cell projection organization GO:0030030 302 0.044
organic acid metabolic process GO:0006082 292 0.042
multi organism reproductive process GO:0044703 262 0.042
cellular response to stress GO:0033554 269 0.041
carboxylic acid metabolic process GO:0019752 289 0.040
single organism catabolic process GO:0044712 283 0.040
oxoacid metabolic process GO:0043436 290 0.038
regulation of multicellular organismal development GO:2000026 376 0.038
cellular component biogenesis GO:0044085 368 0.037
Human
organophosphate metabolic process GO:0019637 370 0.037
response to extracellular stimulus GO:0009991 380 0.036
regulation of cell differentiation GO:0045595 320 0.035
cellular response to oxygen containing compound GO:1901701 386 0.035
neuron development GO:0048666 286 0.035
regulation of molecular function GO:0065009 398 0.034
neuron projection development GO:0031175 273 0.034
protein complex subunit organization GO:0071822 302 0.034
Human
reproductive process GO:0022414 372 0.034
central nervous system development GO:0007417 311 0.034
cellular component assembly GO:0022607 360 0.033
Human
intracellular signal transduction GO:0035556 314 0.033
response to peptide GO:1901652 292 0.032
protein complex assembly GO:0006461 263 0.032
Human
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.032
regulation of cellular component organization GO:0051128 368 0.032
Human Mouse
catabolic process GO:0009056 351 0.032
rna metabolic process GO:0016070 406 0.031
regulation of phosphate metabolic process GO:0019220 349 0.031
Mouse
protein complex biogenesis GO:0070271 263 0.031
Human
anatomical structure morphogenesis GO:0009653 298 0.031
Fly
rna biosynthetic process GO:0032774 380 0.030
response to nutrient levels GO:0031667 370 0.030
regulation of rna metabolic process GO:0051252 391 0.030
nucleic acid templated transcription GO:0097659 379 0.030
regulation of cell development GO:0060284 263 0.030
response to inorganic substance GO:0010035 377 0.029
macromolecular complex assembly GO:0065003 273 0.029
Human
lipid metabolic process GO:0006629 283 0.029
macromolecular complex subunit organization GO:0043933 339 0.029
Human
regulation of cellular amino acid metabolic process GO:0006521 2 0.029
carbohydrate derivative metabolic process GO:1901135 346 0.029
positive regulation of phosphorus metabolic process GO:0010562 262 0.028
Mouse
single organism biosynthetic process GO:0044711 342 0.028
regulation of cell proliferation GO:0042127 359 0.028
reproduction GO:0000003 245 0.028
transcription dna templated GO:0006351 377 0.028
regulation of phosphorus metabolic process GO:0051174 349 0.027
Mouse
cation transport GO:0006812 382 0.027
cellular catabolic process GO:0044248 295 0.027
response to peptide hormone GO:0043434 278 0.027
cellular ketone metabolic process GO:0042180 51 0.027
brain development GO:0007420 247 0.027
regulation of nervous system development GO:0051960 264 0.027
regulation of apoptotic process GO:0042981 335 0.027
Human
cell cell signaling GO:0007267 335 0.027
cellular amino acid metabolic process GO:0006520 107 0.027
macromolecule localization GO:0033036 252 0.027
Human Mouse
protein phosphorylation GO:0006468 345 0.026
Mouse
homeostatic process GO:0042592 331 0.026
nucleobase containing small molecule metabolic process GO:0055086 316 0.026
regulation of neurogenesis GO:0050767 247 0.026
negative regulation of macromolecule metabolic process GO:0010605 260 0.026
regulation of transcription dna templated GO:0006355 374 0.026
positive regulation of biosynthetic process GO:0009891 319 0.026
transmembrane transport GO:0055085 412 0.026
regulation of rna biosynthetic process GO:2001141 381 0.026
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.026
ion homeostasis GO:0050801 212 0.026
negative regulation of metabolic process GO:0009892 331 0.026
response to oxygen levels GO:0070482 265 0.025
cellular amine metabolic process GO:0044106 38 0.025
ion transmembrane transport GO:0034220 365 0.025
apoptotic process GO:0006915 381 0.025
Human
organic substance catabolic process GO:1901575 316 0.025
single organism reproductive process GO:0044702 297 0.025
multicellular organism reproduction GO:0032504 233 0.025
response to decreased oxygen levels GO:0036293 237 0.025
chemical homeostasis GO:0048878 292 0.024
organelle organization GO:0006996 266 0.024
Human
regulation of signal transduction GO:0009966 318 0.024
intracellular transport GO:0046907 185 0.024
regulation of cellular ketone metabolic process GO:0010565 27 0.024
regulation of neuron differentiation GO:0045664 208 0.024
regulation of cellular amine metabolic process GO:0033238 8 0.024
response to hypoxia GO:0001666 231 0.024
head development GO:0060322 247 0.024
transcription from rna polymerase ii promoter GO:0006366 252 0.024
nitrogen compound transport GO:0071705 229 0.024
positive regulation of cell differentiation GO:0045597 217 0.024
synaptic transmission GO:0007268 235 0.024
nucleoside phosphate metabolic process GO:0006753 283 0.023
amine metabolic process GO:0009308 38 0.023
programmed cell death GO:0012501 392 0.023
Human
negative regulation of cellular metabolic process GO:0031324 281 0.023
nucleotide metabolic process GO:0009117 279 0.023
cellular component movement GO:0006928 248 0.023
cellular homeostasis GO:0019725 252 0.023
regulation of catalytic activity GO:0050790 304 0.023
regulation of programmed cell death GO:0043067 341 0.023
Human
positive regulation of developmental process GO:0051094 283 0.022
negative regulation of cell communication GO:0010648 158 0.022
response to corticosteroid GO:0031960 235 0.022
positive regulation of phosphate metabolic process GO:0045937 262 0.022
Mouse
positive regulation of transport GO:0051050 245 0.022
Human Mouse
positive regulation of molecular function GO:0044093 230 0.022
cellular chemical homeostasis GO:0055082 247 0.022
regulation of nucleic acid templated transcription GO:1903506 380 0.022
response to nutrient GO:0007584 248 0.022
cellular response to peptide GO:1901653 133 0.022
ribose phosphate metabolic process GO:0019693 235 0.022
cellular response to organonitrogen compound GO:0071417 197 0.022
ribonucleotide metabolic process GO:0009259 231 0.022
multicellular organismal reproductive process GO:0048609 233 0.022
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.021
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.021
positive regulation of cell proliferation GO:0008284 249 0.021
positive regulation of signaling GO:0023056 270 0.021
regulation of cell projection organization GO:0031344 175 0.021
cellular response to nitrogen compound GO:1901699 210 0.021
regulation of cellular localization GO:0060341 263 0.021
Mouse
positive regulation of multicellular organismal process GO:0051240 387 0.021
negative regulation of multicellular organismal process GO:0051241 203 0.021
positive regulation of response to stimulus GO:0048584 285 0.021
purine containing compound metabolic process GO:0072521 253 0.021
proteolysis GO:0006508 175 0.021
localization of cell GO:0051674 202 0.021
single organism intracellular transport GO:1902582 166 0.021
positive regulation of cellular component organization GO:0051130 200 0.021
Human Mouse
locomotion GO:0040011 237 0.021
protein oligomerization GO:0051259 191 0.020
positive regulation of cellular biosynthetic process GO:0031328 295 0.020
metal ion transport GO:0030001 289 0.020
cellular response to endogenous stimulus GO:0071495 377 0.020
cell migration GO:0016477 197 0.020
regulation of protein metabolic process GO:0051246 289 0.020
Mouse
secretion by cell GO:0032940 248 0.020
tissue development GO:0009888 252 0.020
response to oxidative stress GO:0006979 186 0.020
secretion GO:0046903 307 0.020
negative regulation of gene expression GO:0010629 199 0.019
regulation of cellular protein metabolic process GO:0032268 267 0.019
Mouse
positive regulation of rna metabolic process GO:0051254 203 0.019
regulation of neuron projection development GO:0010975 161 0.019
regeneration GO:0031099 163 0.019
positive regulation of cell development GO:0010720 176 0.019
response to acid chemical GO:0001101 222 0.018
regulation of intracellular signal transduction GO:1902531 218 0.018
purine ribonucleotide metabolic process GO:0009150 227 0.018
protein localization GO:0008104 191 0.018
Human Mouse
response to estrogen GO:0043627 232 0.018
cellular response to hormone stimulus GO:0032870 247 0.018
cell motility GO:0048870 202 0.018
sexual reproduction GO:0019953 148 0.018
cation homeostasis GO:0055080 195 0.018
cellular metal ion homeostasis GO:0006875 172 0.018
response to cytokine GO:0034097 215 0.018
response to glucocorticoid GO:0051384 223 0.018
small gtpase mediated signal transduction GO:0007264 36 0.018
response to carbohydrate GO:0009743 183 0.018
positive regulation of cell communication GO:0010647 271 0.018
metal ion homeostasis GO:0055065 186 0.018
positive regulation of cell death GO:0010942 184 0.018
Human
anion transport GO:0006820 178 0.018
aging GO:0007568 241 0.018
vesicle mediated transport GO:0016192 181 0.018
Human
carbohydrate metabolic process GO:0005975 130 0.018
ras protein signal transduction GO:0007265 29 0.017
response to metal ion GO:0010038 253 0.017
mapk cascade GO:0000165 140 0.017
cellular lipid metabolic process GO:0044255 208 0.017
positive regulation of cellular amine metabolic process GO:0033240 3 0.017
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.017
axon development GO:0061564 96 0.017
regulation of locomotion GO:0040012 148 0.017
purine nucleotide metabolic process GO:0006163 229 0.017
cation transmembrane transport GO:0098655 263 0.017
positive regulation of rna biosynthetic process GO:1902680 197 0.017
regulation of system process GO:0044057 208 0.017
inorganic ion transmembrane transport GO:0098660 229 0.017
positive regulation of catalytic activity GO:0043085 184 0.017
anterior posterior pattern specification GO:0009952 1 0.016
response to growth factor GO:0070848 189 0.016
positive regulation of neurogenesis GO:0050769 165 0.016
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.016
regulation of hormone levels GO:0010817 187 0.016
gamete generation GO:0007276 124 0.016
negative regulation of response to stimulus GO:0048585 155 0.016
negative regulation of transport GO:0051051 136 0.016
response to reactive oxygen species GO:0000302 120 0.016
positive regulation of nervous system development GO:0051962 178 0.016
heart morphogenesis GO:0003007 3 0.016
cellular component morphogenesis GO:0032989 155 0.016
eye morphogenesis GO:0048592 4 0.016
positive regulation of phosphorylation GO:0042327 177 0.016
Mouse
negative regulation of signaling GO:0023057 157 0.016
gland development GO:0048732 155 0.016
response to monosaccharide GO:0034284 159 0.016
gastrulation GO:0007369 2 0.016
response to organophosphorus GO:0046683 102 0.016
organonitrogen compound catabolic process GO:1901565 179 0.016
cellular cation homeostasis GO:0030003 180 0.015
glycosyl compound metabolic process GO:1901657 182 0.015
nucleoside metabolic process GO:0009116 179 0.015
protein transport GO:0015031 132 0.015
Human
positive regulation of programmed cell death GO:0043068 157 0.015
Human
regulation of anatomical structure size GO:0090066 135 0.015
cellular divalent inorganic cation homeostasis GO:0072503 162 0.015
muscle system process GO:0003012 115 0.015
regulation of secretion by cell GO:1903530 208 0.015
response to vitamin GO:0033273 131 0.015
negative regulation of developmental process GO:0051093 125 0.015
response to wounding GO:0009611 254 0.015
negative regulation of cell death GO:0060548 229 0.015
developmental process involved in reproduction GO:0003006 159 0.015
response to purine containing compound GO:0014074 126 0.015
single organism organelle organization GO:1902589 180 0.015
Human
g protein coupled receptor signaling pathway GO:0007186 242 0.015
positive regulation of cell projection organization GO:0031346 111 0.015
positive regulation of gene expression GO:0010628 244 0.015
positive regulation of protein metabolic process GO:0051247 178 0.015
Mouse
positive regulation of nucleic acid templated transcription GO:1903508 197 0.015
cellular macromolecule localization GO:0070727 122 0.015
Mouse
positive regulation of neuron differentiation GO:0045666 126 0.015
cellular ion homeostasis GO:0006873 184 0.015
regulation of anatomical structure morphogenesis GO:0022603 141 0.015
neurological system process GO:0050877 219 0.015
regulation of phosphorylation GO:0042325 248 0.015
Mouse
cellular response to external stimulus GO:0071496 118 0.015
cellular response to peptide hormone stimulus GO:0071375 120 0.015
regulation of membrane potential GO:0042391 110 0.014
small molecule biosynthetic process GO:0044283 124 0.014
signal transduction by phosphorylation GO:0023014 144 0.014
nucleobase containing compound catabolic process GO:0034655 152 0.014
negative regulation of cell proliferation GO:0008285 119 0.014
blood circulation GO:0008015 183 0.014
cellular protein localization GO:0034613 122 0.014
Mouse
behavior GO:0007610 205 0.014
response to camp GO:0051591 91 0.014
female pregnancy GO:0007565 122 0.014
negative regulation of neurogenesis GO:0050768 78 0.014
divalent metal ion transport GO:0070838 132 0.014
cellular response to growth factor stimulus GO:0071363 162 0.014
positive regulation of protein modification process GO:0031401 142 0.014
Mouse
regulation of secretion GO:0051046 224 0.014
lipid biosynthetic process GO:0008610 128 0.014
organic cyclic compound catabolic process GO:1901361 175 0.014
organic acid transport GO:0015849 116 0.014
positive regulation of signal transduction GO:0009967 175 0.014
heterocycle catabolic process GO:0046700 167 0.014
limb morphogenesis GO:0035108 4 0.014
positive regulation of intracellular signal transduction GO:1902533 138 0.014
divalent inorganic cation homeostasis GO:0072507 165 0.014
cytoplasmic transport GO:0016482 115 0.014
purine ribonucleoside metabolic process GO:0046128 168 0.014
cell morphogenesis GO:0000902 142 0.014
neuron projection morphogenesis GO:0048812 122 0.014
positive regulation of cellular protein metabolic process GO:0032270 167 0.014
Mouse
response to hexose GO:0009746 144 0.014
positive regulation of apoptotic process GO:0043065 154 0.014
Human
appendage morphogenesis GO:0035107 4 0.014
rhythmic process GO:0048511 156 0.014
ribonucleoside metabolic process GO:0009119 174 0.014
axis specification GO:0009798 4 0.014
cell projection morphogenesis GO:0048858 123 0.014
negative regulation of cellular biosynthetic process GO:0031327 161 0.013
signal release GO:0023061 145 0.013
circulatory system development GO:0072359 134 0.013
inorganic cation transmembrane transport GO:0098662 202 0.013
negative regulation of cell differentiation GO:0045596 99 0.013
growth GO:0040007 165 0.013
calcium ion homeostasis GO:0055074 162 0.013
multi multicellular organism process GO:0044706 138 0.013
oxidation reduction process GO:0055114 304 0.013
negative regulation of biosynthetic process GO:0009890 168 0.013
cell part morphogenesis GO:0032990 123 0.013
response to ethanol GO:0045471 162 0.013
negative regulation of cellular protein metabolic process GO:0032269 106 0.013
positive regulation of locomotion GO:0040017 102 0.013
negative regulation of molecular function GO:0044092 133 0.013
regulation of kinase activity GO:0043549 117 0.013
regulation of hormone secretion GO:0046883 106 0.013
monovalent inorganic cation transport GO:0015672 172 0.013
organic anion transport GO:0015711 132 0.013
embryonic appendage morphogenesis GO:0035113 4 0.013
establishment of tissue polarity GO:0007164 2 0.013
response to estradiol GO:0032355 164 0.013
response to ketone GO:1901654 182 0.013
regulation of ion transport GO:0043269 245 0.013
regulation of protein phosphorylation GO:0001932 183 0.013
Mouse
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.013
cellular calcium ion homeostasis GO:0006874 160 0.013
cellular nitrogen compound catabolic process GO:0044270 163 0.013
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.013
divalent inorganic cation transport GO:0072511 134 0.013
monocarboxylic acid metabolic process GO:0032787 152 0.013
cellular response to cytokine stimulus GO:0071345 127 0.013
synaptic growth at neuromuscular junction GO:0051124 1 0.013
regulation of canonical wnt signaling pathway GO:0060828 4 0.013
negative regulation of protein metabolic process GO:0051248 114 0.013
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.013
regulation of protein kinase activity GO:0045859 105 0.013
carboxylic acid transport GO:0046942 115 0.012
hormone transport GO:0009914 121 0.012
response to glucose GO:0009749 136 0.012
response to other organism GO:0051707 220 0.012
organophosphate catabolic process GO:0046434 148 0.012
positive regulation of transcription dna templated GO:0045893 197 0.012
regulation of protein modification process GO:0031399 194 0.012
Mouse
response to retinoic acid GO:0032526 63 0.012
calcium ion transport GO:0006816 131 0.012
negative regulation of apoptotic process GO:0043066 181 0.012
protein heterooligomerization GO:0051291 89 0.012
purine nucleoside metabolic process GO:0042278 169 0.012
regulation of cell migration GO:0030334 128 0.012
cytosolic calcium ion homeostasis GO:0051480 140 0.012
cellular response to lipid GO:0071396 201 0.012
purine nucleoside triphosphate metabolic process GO:0009144 141 0.012
purine nucleotide catabolic process GO:0006195 136 0.012
amino acid transport GO:0006865 70 0.012
response to molecule of bacterial origin GO:0002237 194 0.012
regulation of transferase activity GO:0051338 123 0.012
establishment of protein localization GO:0045184 141 0.012
Human Mouse
response to alkaloid GO:0043279 132 0.012
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.012
amide transport GO:0042886 105 0.012
biological adhesion GO:0022610 110 0.012
regulation of synaptic transmission GO:0050804 141 0.012
reproductive system development GO:0061458 128 0.012
nucleotide catabolic process GO:0009166 139 0.012
regulation of hydrolase activity GO:0051336 143 0.012
nucleoside phosphate catabolic process GO:1901292 140 0.012
single organism carbohydrate metabolic process GO:0044723 118 0.012
regulation of cellular component movement GO:0051270 150 0.012
spindle organization GO:0007051 2 0.012
cardiovascular system development GO:0072358 134 0.012
peptidyl amino acid modification GO:0018193 126 0.012
Human
response to insulin GO:0032868 133 0.012
spermatogenesis GO:0007283 99 0.012
nucleoside triphosphate catabolic process GO:0009143 123 0.011
positive regulation of neuron projection development GO:0010976 99 0.011
negative regulation of programmed cell death GO:0043069 183 0.011
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.011
embryonic pattern specification GO:0009880 1 0.011
carbohydrate derivative catabolic process GO:1901136 147 0.011
defense response GO:0006952 194 0.011
action potential GO:0001508 54 0.011
male gamete generation GO:0048232 99 0.011
response to fatty acid GO:0070542 65 0.011
cell growth GO:0016049 104 0.011
purine containing compound catabolic process GO:0072523 138 0.011
aromatic compound catabolic process GO:0019439 168 0.011
lipid storage GO:0019915 1 0.011
purine nucleoside catabolic process GO:0006152 124 0.011
positive regulation of cytosolic calcium ion concentration GO:0007204 122 0.011
maintenance of location GO:0051235 17 0.011
immune system process GO:0002376 204 0.011
regulation of mapk cascade GO:0043408 116 0.011
positive regulation of nucleotide metabolic process GO:0045981 91 0.011
ribonucleotide catabolic process GO:0009261 136 0.011
cofactor metabolic process GO:0051186 95 0.011
regulation of purine nucleotide metabolic process GO:1900542 115 0.011
response to external biotic stimulus GO:0043207 221 0.011
sequestering of calcium ion GO:0051208 8 0.011
nucleoside triphosphate metabolic process GO:0009141 144 0.011
purine ribonucleoside catabolic process GO:0046130 124 0.011
glycosyl compound catabolic process GO:1901658 126 0.011
response to toxic substance GO:0009636 133 0.011
response to lipopolysaccharide GO:0032496 191 0.011
epithelium development GO:0060429 96 0.011
positive regulation of transferase activity GO:0051347 81 0.011
ribonucleoside catabolic process GO:0042454 126 0.011
regulation of neuron death GO:1901214 115 0.011
carbohydrate derivative biosynthetic process GO:1901137 124 0.011
multicellular organism growth GO:0035264 1 0.011
detection of chemical stimulus involved in sensory perception of bitter taste GO:0001580 4 0.011
organophosphate biosynthetic process GO:0090407 143 0.011
embryonic limb morphogenesis GO:0030326 4 0.011
cellular response to organic cyclic compound GO:0071407 202 0.011
endocytosis GO:0006897 84 0.011
Human
regulation of blood circulation GO:1903522 110 0.010
transmission of nerve impulse GO:0019226 42 0.010
enzyme linked receptor protein signaling pathway GO:0007167 116 0.010
regulation of cell motility GO:2000145 131 0.010
regulation of nucleotide metabolic process GO:0006140 117 0.010
hematopoietic progenitor cell differentiation GO:0002244 2 0.010
ribonucleoside triphosphate metabolic process GO:0009199 141 0.010
hormone secretion GO:0046879 115 0.010
cell type specific apoptotic process GO:0097285 134 0.010
wound healing GO:0042060 122 0.010
rna localization GO:0006403 4 0.010
neuron death GO:0070997 127 0.010
tube development GO:0035295 89 0.010
negative regulation of nervous system development GO:0051961 79 0.010
reactive nitrogen species metabolic process GO:2001057 1 0.010
regulation of metal ion transport GO:0010959 118 0.010
regulation of catabolic process GO:0009894 113 0.010
sensory organ development GO:0007423 74 0.010
nucleoside catabolic process GO:0009164 126 0.010
cell adhesion GO:0007155 110 0.010
peptide hormone secretion GO:0030072 84 0.010
negative regulation of rna metabolic process GO:0051253 123 0.010
positive regulation of cellular component movement GO:0051272 102 0.010
purine ribonucleotide catabolic process GO:0009154 136 0.010
reactive oxygen species biosynthetic process GO:1903409 8 0.010
sequestering of metal ion GO:0051238 9 0.010
reproductive structure development GO:0048608 128 0.010
positive regulation of immune system process GO:0002684 90 0.010
neuronal action potential GO:0019228 35 0.010
intracellular protein transport GO:0006886 79 0.010
response to transition metal nanoparticle GO:1990267 122 0.010
organic hydroxy compound transport GO:0015850 77 0.010
regulation of homeostatic process GO:0032844 101 0.010
positive regulation of mapk cascade GO:0043410 92 0.010
regulation of cell morphogenesis involved in differentiation GO:0010769 72 0.010
axonogenesis GO:0007409 71 0.010

Clip3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.020
nervous system disease DOID:863 0 0.020
disease of metabolism DOID:0014667 0 0.015
musculoskeletal system disease DOID:17 0 0.015
central nervous system disease DOID:331 0 0.011
sensory system disease DOID:0050155 0 0.010
inherited metabolic disorder DOID:655 0 0.010