Rattus norvegicus

92 known processes

Tnfsf9

tumor necrosis factor (ligand) superfamily, member 9

Tnfsf9 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
rna metabolic process GO:0016070 406 0.082
protein phosphorylation GO:0006468 345 0.045
regulation of rna biosynthetic process GO:2001141 381 0.043
response to inorganic substance GO:0010035 377 0.042
small molecule biosynthetic process GO:0044283 124 0.041
rna biosynthetic process GO:0032774 380 0.039
transcription dna templated GO:0006351 377 0.037
organic acid metabolic process GO:0006082 292 0.036
regulation of nucleic acid templated transcription GO:1903506 380 0.036
regulation of transcription dna templated GO:0006355 374 0.036
regulation of rna metabolic process GO:0051252 391 0.033
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.033
cellular response to oxygen containing compound GO:1901701 386 0.033
response to peptide hormone GO:0043434 278 0.033
defense response GO:0006952 194 0.031
homeostatic process GO:0042592 331 0.030
response to extracellular stimulus GO:0009991 380 0.030
chemical homeostasis GO:0048878 292 0.030
cellular amino acid metabolic process GO:0006520 107 0.030
positive regulation of transcription dna templated GO:0045893 197 0.030
carboxylic acid metabolic process GO:0019752 289 0.030
cellular amine metabolic process GO:0044106 38 0.030
response to bacterium GO:0009617 200 0.028
cellular response to organonitrogen compound GO:0071417 197 0.028
intracellular signal transduction GO:0035556 314 0.028
response to external biotic stimulus GO:0043207 221 0.028
cellular catabolic process GO:0044248 295 0.027
regulation of apoptotic process GO:0042981 335 0.027
anatomical structure morphogenesis GO:0009653 298 0.027
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.027
regulation of cellular component organization GO:0051128 368 0.027
response to cytokine GO:0034097 215 0.026
oxoacid metabolic process GO:0043436 290 0.026
regulation of cellular protein metabolic process GO:0032268 267 0.026
cellular cation homeostasis GO:0030003 180 0.025
catabolic process GO:0009056 351 0.025
regulation of cellular amine metabolic process GO:0033238 8 0.025
cellular chemical homeostasis GO:0055082 247 0.025
amine metabolic process GO:0009308 38 0.025
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.025
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.025
negative regulation of apoptotic process GO:0043066 181 0.024
immune system process GO:0002376 204 0.024
cellular calcium ion homeostasis GO:0006874 160 0.024
regulation of cellular amino acid metabolic process GO:0006521 2 0.024
regulation of phosphorus metabolic process GO:0051174 349 0.024
regulation of signal transduction GO:0009966 318 0.023
response to nutrient levels GO:0031667 370 0.023
sexual reproduction GO:0019953 148 0.023
response to other organism GO:0051707 220 0.023
positive regulation of cellular biosynthetic process GO:0031328 295 0.023
regulation of multicellular organismal development GO:2000026 376 0.023
organelle organization GO:0006996 266 0.023
ion homeostasis GO:0050801 212 0.023
small gtpase mediated signal transduction GO:0007264 36 0.023
positive regulation of gene expression GO:0010628 244 0.023
positive regulation of nucleic acid templated transcription GO:1903508 197 0.023
positive regulation of cellular amine metabolic process GO:0033240 3 0.023
regulation of neurogenesis GO:0050767 247 0.022
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.022
regulation of cell differentiation GO:0045595 320 0.022
positive regulation of rna biosynthetic process GO:1902680 197 0.022
regulation of immune system process GO:0002682 123 0.022
positive regulation of rna metabolic process GO:0051254 203 0.021
multi organism reproductive process GO:0044703 262 0.021
regulation of response to external stimulus GO:0032101 106 0.021
ras protein signal transduction GO:0007265 29 0.021
regulation of protein metabolic process GO:0051246 289 0.021
regulation of cellular ketone metabolic process GO:0010565 27 0.021
regulation of system process GO:0044057 208 0.021
neuron differentiation GO:0030182 368 0.021
response to peptide GO:1901652 292 0.021
cellular homeostasis GO:0019725 252 0.021
neurological system process GO:0050877 219 0.021
cellular response to nitrogen compound GO:1901699 210 0.021
immune system development GO:0002520 41 0.020
response to alkaloid GO:0043279 132 0.020
cellular component biogenesis GO:0044085 368 0.020
macromolecule localization GO:0033036 252 0.020
positive regulation of signal transduction GO:0009967 175 0.020
positive regulation of cytosolic calcium ion concentration GO:0007204 122 0.020
macromolecular complex subunit organization GO:0043933 339 0.020
response to growth factor GO:0070848 189 0.020
cellular response to stress GO:0033554 269 0.020
cellular ion homeostasis GO:0006873 184 0.019
calcium ion homeostasis GO:0055074 162 0.019
cation homeostasis GO:0055080 195 0.019
response to biotic stimulus GO:0009607 226 0.019
regulation of programmed cell death GO:0043067 341 0.019
positive regulation of response to stimulus GO:0048584 285 0.019
cellular divalent inorganic cation homeostasis GO:0072503 162 0.019
cell migration GO:0016477 197 0.018
divalent inorganic cation homeostasis GO:0072507 165 0.018
cellular response to alkaloid GO:0071312 25 0.018
cellular component movement GO:0006928 248 0.018
positive regulation of cell differentiation GO:0045597 217 0.018
programmed cell death GO:0012501 392 0.018
multicellular organismal reproductive process GO:0048609 233 0.018
regulation of secretion GO:0051046 224 0.018
organic substance catabolic process GO:1901575 316 0.017
nucleic acid templated transcription GO:0097659 379 0.017
positive regulation of phosphorylation GO:0042327 177 0.017
localization of cell GO:0051674 202 0.017
negative regulation of cell death GO:0060548 229 0.017
cellular ketone metabolic process GO:0042180 51 0.017
positive regulation of multicellular organismal process GO:0051240 387 0.017
cellular response to tumor necrosis factor GO:0071356 46 0.017
cellular component assembly GO:0022607 360 0.017
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.017
metal ion transport GO:0030001 289 0.017
transcription from rna polymerase ii promoter GO:0006366 252 0.017
apoptotic process GO:0006915 381 0.016
secretion GO:0046903 307 0.016
carbohydrate derivative metabolic process GO:1901135 346 0.016
hematopoietic or lymphoid organ development GO:0048534 36 0.016
central nervous system development GO:0007417 311 0.016
regulation of intracellular signal transduction GO:1902531 218 0.016
protein complex subunit organization GO:0071822 302 0.016
negative regulation of cellular metabolic process GO:0031324 281 0.016
negative regulation of macromolecule metabolic process GO:0010605 260 0.016
positive regulation of immune system process GO:0002684 90 0.016
single organism catabolic process GO:0044712 283 0.016
regulation of molecular function GO:0065009 398 0.016
vesicle mediated transport GO:0016192 181 0.016
positive regulation of molecular function GO:0044093 230 0.016
neuron projection development GO:0031175 273 0.015
aging GO:0007568 241 0.015
positive regulation of developmental process GO:0051094 283 0.015
reproductive process GO:0022414 372 0.015
single organism biosynthetic process GO:0044711 342 0.015
negative regulation of metabolic process GO:0009892 331 0.015
positive regulation of biosynthetic process GO:0009891 319 0.015
cellular response to cytokine stimulus GO:0071345 127 0.015
positive regulation of phosphate metabolic process GO:0045937 262 0.015
positive regulation of cell death GO:0010942 184 0.015
regulation of nervous system development GO:0051960 264 0.015
response to metal ion GO:0010038 253 0.015
positive regulation of signaling GO:0023056 270 0.015
response to oxygen levels GO:0070482 265 0.015
positive regulation of leukocyte degranulation GO:0043302 4 0.015
single organism reproductive process GO:0044702 297 0.014
regulation of organic acid transport GO:0032890 35 0.014
cell projection organization GO:0030030 302 0.014
single organism organelle organization GO:1902589 180 0.014
regulation of neuron apoptotic process GO:0043523 83 0.014
negative regulation of nucleic acid templated transcription GO:1903507 117 0.014
inflammatory response GO:0006954 150 0.014
sensory perception GO:0007600 101 0.014
positive regulation of neuron differentiation GO:0045666 126 0.014
positive regulation of protein metabolic process GO:0051247 178 0.014
developmental process involved in reproduction GO:0003006 159 0.014
peptidyl amino acid modification GO:0018193 126 0.014
heterocycle catabolic process GO:0046700 167 0.014
cellular nitrogen compound catabolic process GO:0044270 163 0.014
carboxylic acid transport GO:0046942 115 0.014
organic acid transport GO:0015849 116 0.014
cellular metal ion homeostasis GO:0006875 172 0.013
regulation of cellular component movement GO:0051270 150 0.013
head development GO:0060322 247 0.013
regulation of anion transport GO:0044070 43 0.013
metal ion homeostasis GO:0055065 186 0.013
response to transition metal nanoparticle GO:1990267 122 0.013
positive regulation of protein phosphorylation GO:0001934 135 0.013
cellular response to lipid GO:0071396 201 0.013
regulation of phosphate metabolic process GO:0019220 349 0.013
positive regulation of cell communication GO:0010647 271 0.013
neuron death GO:0070997 127 0.013
peptidyl tyrosine phosphorylation GO:0018108 72 0.013
positive regulation of programmed cell death GO:0043068 157 0.013
lipid biosynthetic process GO:0008610 128 0.013
positive regulation of protein modification process GO:0031401 142 0.013
positive regulation of cellular protein metabolic process GO:0032270 167 0.013
multicellular organism reproduction GO:0032504 233 0.013
response to tumor necrosis factor GO:0034612 56 0.013
organic cyclic compound catabolic process GO:1901361 175 0.013
regulation of protein modification process GO:0031399 194 0.013
macromolecular complex assembly GO:0065003 273 0.013
regulation of cellular localization GO:0060341 263 0.013
locomotion GO:0040011 237 0.013
morphogenesis of embryonic epithelium GO:0016331 3 0.013
positive regulation of cell proliferation GO:0008284 249 0.013
regulation of protein phosphorylation GO:0001932 183 0.012
cellular response to fluid shear stress GO:0071498 4 0.012
regulation of hormone levels GO:0010817 187 0.012
regulation of angiogenesis GO:0045765 39 0.012
organic anion transport GO:0015711 132 0.012
cell motility GO:0048870 202 0.012
regulation of cell development GO:0060284 263 0.012
peptidyl tyrosine modification GO:0018212 72 0.012
neuron apoptotic process GO:0051402 88 0.012
negative regulation of programmed cell death GO:0043069 183 0.012
negative regulation of extrinsic apoptotic signaling pathway GO:2001237 4 0.012
cellular response to growth factor stimulus GO:0071363 162 0.012
positive regulation of intracellular signal transduction GO:1902533 138 0.012
regulation of phosphorylation GO:0042325 248 0.012
response to decreased oxygen levels GO:0036293 237 0.012
positive regulation of apoptotic process GO:0043065 154 0.012
response to estrogen GO:0043627 232 0.012
purine containing compound metabolic process GO:0072521 253 0.012
anion transport GO:0006820 178 0.012
negative regulation of cell communication GO:0010648 158 0.012
blood vessel morphogenesis GO:0048514 58 0.012
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.012
protein complex assembly GO:0006461 263 0.012
single organism intracellular transport GO:1902582 166 0.012
cellular response to endogenous stimulus GO:0071495 377 0.012
protein localization GO:0008104 191 0.012
gamete generation GO:0007276 124 0.012
leukocyte migration GO:0050900 38 0.012
response to molecule of bacterial origin GO:0002237 194 0.012
reproduction GO:0000003 245 0.012
positive regulation of transport GO:0051050 245 0.012
organonitrogen compound catabolic process GO:1901565 179 0.011
positive regulation of cell development GO:0010720 176 0.011
gastrulation GO:0007369 2 0.011
spermatogenesis GO:0007283 99 0.011
negative regulation of signaling GO:0023057 157 0.011
cell type specific apoptotic process GO:0097285 134 0.011
response to nutrient GO:0007584 248 0.011
cellular response to extracellular stimulus GO:0031668 73 0.011
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.011
positive regulation of angiogenesis GO:0045766 28 0.011
growth GO:0040007 165 0.011
reactive oxygen species metabolic process GO:0072593 37 0.011
monocarboxylic acid metabolic process GO:0032787 152 0.011
lipid metabolic process GO:0006629 283 0.011
cellular response to external stimulus GO:0071496 118 0.011
protein homooligomerization GO:0051260 91 0.011
angiogenesis GO:0001525 53 0.011
protein complex biogenesis GO:0070271 263 0.011
negative regulation of gene expression GO:0010629 199 0.011
anatomical structure formation involved in morphogenesis GO:0048646 83 0.011
brain development GO:0007420 247 0.011
cellular response to biotic stimulus GO:0071216 59 0.011
protein transport GO:0015031 132 0.011
positive regulation of cellular component movement GO:0051272 102 0.011
regulation of anatomical structure morphogenesis GO:0022603 141 0.011
regulation of leukocyte activation GO:0002694 45 0.010
ribose phosphate metabolic process GO:0019693 235 0.010
carboxylic acid biosynthetic process GO:0046394 83 0.010
regulation of neuron death GO:1901214 115 0.010
nucleobase containing small molecule metabolic process GO:0055086 316 0.010
ion transmembrane transport GO:0034220 365 0.010
action potential GO:0001508 54 0.010
response to insulin GO:0032868 133 0.010
regulation of membrane potential GO:0042391 110 0.010
negative regulation of biosynthetic process GO:0009890 168 0.010
positive regulation of phosphorus metabolic process GO:0010562 262 0.010
sensory perception of pain GO:0019233 73 0.010

Tnfsf9 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.016
nervous system disease DOID:863 0 0.016
musculoskeletal system disease DOID:17 0 0.014
connective tissue disease DOID:65 0 0.014
central nervous system disease DOID:331 0 0.011