Rattus norvegicus

7 known processes

Atg3

ATG3 autophagy related 3 homolog (S. cerevisiae)

(Aliases: Pig1,Apg3l,PIG-1)

Atg3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
vesicle mediated transport GO:0016192 181 0.108
regulation of rna metabolic process GO:0051252 391 0.097
negative regulation of metabolic process GO:0009892 331 0.095
rna metabolic process GO:0016070 406 0.060
negative regulation of cellular metabolic process GO:0031324 281 0.057
cell cell signaling GO:0007267 335 0.056
rna biosynthetic process GO:0032774 380 0.056
cellular component biogenesis GO:0044085 368 0.052
catabolic process GO:0009056 351 0.051
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.050
regulation of protein metabolic process GO:0051246 289 0.048
negative regulation of cell death GO:0060548 229 0.044
negative regulation of macromolecule metabolic process GO:0010605 260 0.042
regulation of rna biosynthetic process GO:2001141 381 0.042
nucleoside phosphate metabolic process GO:0006753 283 0.040
negative regulation of protein metabolic process GO:0051248 114 0.040
regulation of cell differentiation GO:0045595 320 0.037
single organism intracellular transport GO:1902582 166 0.037
negative regulation of cellular protein metabolic process GO:0032269 106 0.036
apoptotic process GO:0006915 381 0.036
negative regulation of gene expression GO:0010629 199 0.036
nucleic acid templated transcription GO:0097659 379 0.035
neuron differentiation GO:0030182 368 0.035
negative regulation of apoptotic process GO:0043066 181 0.034
organelle organization GO:0006996 266 0.033
protein complex assembly GO:0006461 263 0.033
response to reactive oxygen species GO:0000302 120 0.033
organic substance catabolic process GO:1901575 316 0.032
cellular protein localization GO:0034613 122 0.031
regulation of cellular component organization GO:0051128 368 0.030
cellular response to stress GO:0033554 269 0.030
regulation of multicellular organismal development GO:2000026 376 0.029
transcription from rna polymerase ii promoter GO:0006366 252 0.029
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.029
central nervous system development GO:0007417 311 0.029
intracellular transport GO:0046907 185 0.029
regulation of secretion GO:0051046 224 0.029
regulation of cellular protein metabolic process GO:0032268 267 0.028
carbohydrate derivative metabolic process GO:1901135 346 0.027
positive regulation of nucleic acid templated transcription GO:1903508 197 0.027
multicellular organismal reproductive process GO:0048609 233 0.026
macromolecular complex subunit organization GO:0043933 339 0.026
transcription dna templated GO:0006351 377 0.025
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.025
cellular component movement GO:0006928 248 0.025
regulation of secretion by cell GO:1903530 208 0.025
signal release GO:0023061 145 0.025
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.024
cellular component assembly GO:0022607 360 0.024
proteolysis GO:0006508 175 0.024
synaptic transmission GO:0007268 235 0.024
secretion GO:0046903 307 0.024
regulation of nucleic acid templated transcription GO:1903506 380 0.024
programmed cell death GO:0012501 392 0.024
regulation of vesicle mediated transport GO:0060627 81 0.023
cellular macromolecule localization GO:0070727 122 0.023
secretion by cell GO:0032940 248 0.023
positive regulation of biosynthetic process GO:0009891 319 0.023
regulation of apoptotic process GO:0042981 335 0.023
nucleotide metabolic process GO:0009117 279 0.023
protein complex biogenesis GO:0070271 263 0.023
negative regulation of multicellular organismal process GO:0051241 203 0.022
purine containing compound metabolic process GO:0072521 253 0.021
head development GO:0060322 247 0.021
organophosphate metabolic process GO:0019637 370 0.021
positive regulation of transport GO:0051050 245 0.021
macromolecule localization GO:0033036 252 0.021
developmental process involved in reproduction GO:0003006 159 0.021
negative regulation of molecular function GO:0044092 133 0.021
macromolecule catabolic process GO:0009057 58 0.021
regulation of transcription dna templated GO:0006355 374 0.021
regulation of response to stress GO:0080134 126 0.020
protein complex subunit organization GO:0071822 302 0.020
positive regulation of cellular biosynthetic process GO:0031328 295 0.020
regulation of hormone levels GO:0010817 187 0.020
anatomical structure morphogenesis GO:0009653 298 0.020
axis specification GO:0009798 4 0.020
cardiovascular system development GO:0072358 134 0.020
positive regulation of developmental process GO:0051094 283 0.020
regulation of cellular localization GO:0060341 263 0.020
eye morphogenesis GO:0048592 4 0.020
protein oligomerization GO:0051259 191 0.019
multi organism reproductive process GO:0044703 262 0.019
homeostatic process GO:0042592 331 0.019
reproductive process GO:0022414 372 0.019
macromolecular complex assembly GO:0065003 273 0.019
positive regulation of rna biosynthetic process GO:1902680 197 0.019
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.019
positive regulation of multicellular organismal process GO:0051240 387 0.019
chemical homeostasis GO:0048878 292 0.019
regulation of cell development GO:0060284 263 0.019
lipid metabolic process GO:0006629 283 0.019
positive regulation of nervous system development GO:0051962 178 0.018
regulation of catabolic process GO:0009894 113 0.018
aging GO:0007568 241 0.018
regulation of synaptic transmission GO:0050804 141 0.018
negative regulation of programmed cell death GO:0043069 183 0.018
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.018
protein localization GO:0008104 191 0.018
neuron development GO:0048666 286 0.018
regulation of molecular function GO:0065009 398 0.018
neuron projection development GO:0031175 273 0.017
cell type specific apoptotic process GO:0097285 134 0.017
response to inorganic substance GO:0010035 377 0.017
cellular catabolic process GO:0044248 295 0.017
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.017
positive regulation of neuron differentiation GO:0045666 126 0.017
cytoskeleton organization GO:0007010 111 0.016
intracellular signal transduction GO:0035556 314 0.016
nitrogen compound transport GO:0071705 229 0.016
cellular amine metabolic process GO:0044106 38 0.016
coenzyme metabolic process GO:0006732 86 0.016
positive regulation of gene expression GO:0010628 244 0.016
nucleobase containing small molecule metabolic process GO:0055086 316 0.016
cell projection organization GO:0030030 302 0.016
reproduction GO:0000003 245 0.016
positive regulation of secretion GO:0051047 140 0.016
negative regulation of cellular biosynthetic process GO:0031327 161 0.016
amine metabolic process GO:0009308 38 0.015
cellular ketone metabolic process GO:0042180 51 0.015
peptide hormone secretion GO:0030072 84 0.015
intracellular protein transport GO:0006886 79 0.015
gonad development GO:0008406 104 0.015
regulation of protein localization GO:0032880 81 0.015
positive regulation of cell proliferation GO:0008284 249 0.015
purine ribonucleoside metabolic process GO:0046128 168 0.014
single organism organelle organization GO:1902589 180 0.014
protein homooligomerization GO:0051260 91 0.014
axon development GO:0061564 96 0.014
negative regulation of developmental process GO:0051093 125 0.014
regulation of nervous system development GO:0051960 264 0.014
alternative mrna splicing via spliceosome GO:0000380 4 0.014
positive regulation of cell development GO:0010720 176 0.014
multicellular organism reproduction GO:0032504 233 0.014
regulation of cell proliferation GO:0042127 359 0.014
response to nutrient levels GO:0031667 370 0.014
response to extracellular stimulus GO:0009991 380 0.014
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.013
negative regulation of transcription from rna polymerase ii promoter GO:0000122 75 0.013
cell morphogenesis involved in differentiation GO:0000904 119 0.013
gamete generation GO:0007276 124 0.013
regulation of anatomical structure morphogenesis GO:0022603 141 0.013
positive regulation of programmed cell death GO:0043068 157 0.013
cellular response to oxygen containing compound GO:1901701 386 0.013
response to hydrogen peroxide GO:0042542 89 0.013
regulation of programmed cell death GO:0043067 341 0.013
response to molecule of bacterial origin GO:0002237 194 0.013
sexual reproduction GO:0019953 148 0.013
single organism reproductive process GO:0044702 297 0.012
single organism cellular localization GO:1902580 102 0.012
cellular response to reactive oxygen species GO:0034614 55 0.012
response to hypoxia GO:0001666 231 0.012
cellular response to fluid shear stress GO:0071498 4 0.012
transmembrane transport GO:0055085 412 0.012
positive regulation of transcription dna templated GO:0045893 197 0.012
reactive oxygen species metabolic process GO:0072593 37 0.012
nucleobase containing compound catabolic process GO:0034655 152 0.012
response to biotic stimulus GO:0009607 226 0.012
positive regulation of response to stimulus GO:0048584 285 0.012
regulation of catalytic activity GO:0050790 304 0.012
protein refolding GO:0042026 3 0.012
negative regulation of transport GO:0051051 136 0.012
neurological system process GO:0050877 219 0.012
muscle structure development GO:0061061 87 0.012
positive regulation of molecular function GO:0044093 230 0.012
ossification GO:0001503 70 0.012
regulation of neuron differentiation GO:0045664 208 0.012
peptide secretion GO:0002790 86 0.011
circulatory system development GO:0072359 134 0.011
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.011
hormone secretion GO:0046879 115 0.011
regulation of mrna splicing via spliceosome GO:0048024 3 0.011
response to glucose GO:0009749 136 0.011
positive regulation of secretion by cell GO:1903532 128 0.011
gland development GO:0048732 155 0.011
cation transport GO:0006812 382 0.011
negative regulation of nucleic acid templated transcription GO:1903507 117 0.011
behavior GO:0007610 205 0.011
positive regulation of cellular component organization GO:0051130 200 0.011
anion transport GO:0006820 178 0.011
anterior posterior pattern specification GO:0009952 1 0.011
regulation of anatomical structure size GO:0090066 135 0.011
response to growth factor GO:0070848 189 0.011
positive regulation of catabolic process GO:0009896 78 0.011
amide transport GO:0042886 105 0.011
regulation of cellular amino acid metabolic process GO:0006521 2 0.011
response to decreased oxygen levels GO:0036293 237 0.011
cell cycle checkpoint GO:0000075 2 0.011
protein transport GO:0015031 132 0.011
regulation of cellular ketone metabolic process GO:0010565 27 0.011
endocytosis GO:0006897 84 0.010
carbohydrate metabolic process GO:0005975 130 0.010
monosaccharide metabolic process GO:0005996 61 0.010
positive regulation of cell death GO:0010942 184 0.010
cellular response to external stimulus GO:0071496 118 0.010
peptide transport GO:0015833 97 0.010
cellular response to nitrogen compound GO:1901699 210 0.010
localization of cell GO:0051674 202 0.010
positive regulation of rna metabolic process GO:0051254 203 0.010
exocytosis GO:0006887 60 0.010
ribose phosphate metabolic process GO:0019693 235 0.010
organic cyclic compound catabolic process GO:1901361 175 0.010
response to carbohydrate GO:0009743 183 0.010
response to cytokine GO:0034097 215 0.010
dna metabolic process GO:0006259 96 0.010
single organism biosynthetic process GO:0044711 342 0.010

Atg3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.016
nervous system disease DOID:863 0 0.016
disease of metabolism DOID:0014667 0 0.012