Rattus norvegicus

169 known processes

Calm3

calmodulin 3

(Aliases: RNCAMIII,Calm2,Calm1)

Calm3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
neuron development GO:0048666 286 0.364
regulation of cellular component organization GO:0051128 368 0.281
cellular catabolic process GO:0044248 295 0.220
neuron differentiation GO:0030182 368 0.214
nucleobase containing small molecule metabolic process GO:0055086 316 0.213
nucleotide metabolic process GO:0009117 279 0.184
organophosphate metabolic process GO:0019637 370 0.183
vesicle mediated transport GO:0016192 181 0.168
positive regulation of transport GO:0051050 245 0.150
regulation of ion transport GO:0043269 245 0.149
single organism intracellular transport GO:1902582 166 0.140
purine nucleotide metabolic process GO:0006163 229 0.128
regulation of molecular function GO:0065009 398 0.127
regulation of cell differentiation GO:0045595 320 0.119
positive regulation of cell differentiation GO:0045597 217 0.117
synaptic transmission GO:0007268 235 0.109
dephosphorylation GO:0016311 98 0.107
cell projection organization GO:0030030 302 0.106
intracellular transport GO:0046907 185 0.105
regulation of phosphorus metabolic process GO:0051174 349 0.104
programmed cell death GO:0012501 392 0.102
carbohydrate derivative metabolic process GO:1901135 346 0.101
regulation of phosphate metabolic process GO:0019220 349 0.100
single organism biosynthetic process GO:0044711 342 0.099
regulation of vesicle mediated transport GO:0060627 81 0.097
ribonucleotide biosynthetic process GO:0009260 85 0.093
organophosphate biosynthetic process GO:0090407 143 0.093
cation transport GO:0006812 382 0.093
brain development GO:0007420 247 0.091
positive regulation of neurogenesis GO:0050769 165 0.091
neuron projection development GO:0031175 273 0.086
purine containing compound biosynthetic process GO:0072522 85 0.084
carboxylic acid metabolic process GO:0019752 289 0.080
organic acid metabolic process GO:0006082 292 0.080
positive regulation of phosphorus metabolic process GO:0010562 262 0.079
positive regulation of phosphate metabolic process GO:0045937 262 0.078
regulation of purine nucleotide metabolic process GO:1900542 115 0.077
regulation of programmed cell death GO:0043067 341 0.077
catabolic process GO:0009056 351 0.074
head development GO:0060322 247 0.074
immune system process GO:0002376 204 0.074
organelle organization GO:0006996 266 0.073
behavior GO:0007610 205 0.069
intracellular signal transduction GO:0035556 314 0.069
nucleoside phosphate metabolic process GO:0006753 283 0.069
positive regulation of multicellular organismal process GO:0051240 387 0.067
regulation of multicellular organismal development GO:2000026 376 0.066
carbohydrate derivative biosynthetic process GO:1901137 124 0.066
single organism catabolic process GO:0044712 283 0.064
cellular component biogenesis GO:0044085 368 0.063
regulation of cellular protein metabolic process GO:0032268 267 0.063
purine containing compound metabolic process GO:0072521 253 0.062
carbohydrate metabolic process GO:0005975 130 0.061
regulation of cell development GO:0060284 263 0.061
positive regulation of cellular component organization GO:0051130 200 0.060
organonitrogen compound biosynthetic process GO:1901566 167 0.060
single organism reproductive process GO:0044702 297 0.059
ribonucleotide metabolic process GO:0009259 231 0.059
organic substance catabolic process GO:1901575 316 0.058
protein localization GO:0008104 191 0.057
neuron death GO:0070997 127 0.057
secretion GO:0046903 307 0.057
ribose phosphate biosynthetic process GO:0046390 87 0.056
ras protein signal transduction GO:0007265 29 0.053
cellular homeostasis GO:0019725 252 0.053
purine nucleotide biosynthetic process GO:0006164 83 0.053
positive regulation of cell development GO:0010720 176 0.051
oxoacid metabolic process GO:0043436 290 0.050
purine nucleoside metabolic process GO:0042278 169 0.049
cellular component assembly GO:0022607 360 0.049
regulation of nervous system development GO:0051960 264 0.049
purine ribonucleotide biosynthetic process GO:0009152 81 0.049
locomotion GO:0040011 237 0.048
regulation of catalytic activity GO:0050790 304 0.048
positive regulation of signal transduction GO:0009967 175 0.048
cellular response to oxygen containing compound GO:1901701 386 0.047
positive regulation of developmental process GO:0051094 283 0.047
nucleoside triphosphate metabolic process GO:0009141 144 0.047
small gtpase mediated signal transduction GO:0007264 36 0.047
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.046
homeostatic process GO:0042592 331 0.046
regulation of neuron projection development GO:0010975 161 0.045
negative regulation of apoptotic process GO:0043066 181 0.044
regulation of nucleotide biosynthetic process GO:0030808 47 0.044
protein phosphorylation GO:0006468 345 0.043
establishment of organelle localization GO:0051656 37 0.043
regulation of neurogenesis GO:0050767 247 0.043
regulation of neuron differentiation GO:0045664 208 0.043
regulation of cellular catabolic process GO:0031329 101 0.042
regulation of apoptotic process GO:0042981 335 0.041
ribose phosphate metabolic process GO:0019693 235 0.041
cellular response to external stimulus GO:0071496 118 0.040
central nervous system development GO:0007417 311 0.040
response to monosaccharide GO:0034284 159 0.040
regulation of cellular localization GO:0060341 263 0.040
regulation of neuron death GO:1901214 115 0.039
purine ribonucleoside metabolic process GO:0046128 168 0.039
regulation of cell projection organization GO:0031344 175 0.039
positive regulation of response to stimulus GO:0048584 285 0.039
cellular response to stress GO:0033554 269 0.037
metal ion transport GO:0030001 289 0.037
positive regulation of nervous system development GO:0051962 178 0.037
ribonucleoside triphosphate metabolic process GO:0009199 141 0.037
cellular amino acid metabolic process GO:0006520 107 0.037
regulation of cellular response to stress GO:0080135 49 0.037
positive regulation of molecular function GO:0044093 230 0.037
regulation of catabolic process GO:0009894 113 0.036
ribonucleotide catabolic process GO:0009261 136 0.036
negative regulation of cell death GO:0060548 229 0.036
regulation of rna biosynthetic process GO:2001141 381 0.036
purine nucleoside triphosphate metabolic process GO:0009144 141 0.036
ribonucleoside metabolic process GO:0009119 174 0.036
negative regulation of signaling GO:0023057 157 0.035
gtp metabolic process GO:0046039 72 0.034
regulation of protein kinase activity GO:0045859 105 0.034
negative regulation of metabolic process GO:0009892 331 0.033
purine ribonucleotide metabolic process GO:0009150 227 0.033
reproductive process GO:0022414 372 0.033
anatomical structure morphogenesis GO:0009653 298 0.032
cell cell signaling GO:0007267 335 0.032
cellular component morphogenesis GO:0032989 155 0.032
purine nucleoside catabolic process GO:0006152 124 0.032
nucleic acid templated transcription GO:0097659 379 0.032
protein complex subunit organization GO:0071822 302 0.032
nucleoside phosphate biosynthetic process GO:1901293 102 0.032
macromolecular complex subunit organization GO:0043933 339 0.031
response to cytokine GO:0034097 215 0.031
gastrulation GO:0007369 2 0.031
macromolecular complex assembly GO:0065003 273 0.031
organic cyclic compound catabolic process GO:1901361 175 0.030
response to wounding GO:0009611 254 0.030
cellular chemical homeostasis GO:0055082 247 0.029
protein complex biogenesis GO:0070271 263 0.029
purine nucleoside triphosphate catabolic process GO:0009146 122 0.029
negative regulation of molecular function GO:0044092 133 0.029
regulation of signal transduction GO:0009966 318 0.029
purine ribonucleoside monophosphate metabolic process GO:0009167 84 0.028
protein complex assembly GO:0006461 263 0.028
nucleoside metabolic process GO:0009116 179 0.028
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.027
regulation of synaptic transmission GO:0050804 141 0.027
regulation of transcription dna templated GO:0006355 374 0.027
regulation of protein phosphorylation GO:0001932 183 0.027
sensory organ development GO:0007423 74 0.027
amp metabolic process GO:0046033 8 0.027
response to reactive oxygen species GO:0000302 120 0.027
positive regulation of apoptotic process GO:0043065 154 0.027
cellular ketone metabolic process GO:0042180 51 0.026
macromolecule localization GO:0033036 252 0.026
forebrain development GO:0030900 98 0.026
neuron apoptotic process GO:0051402 88 0.026
single organism behavior GO:0044708 130 0.026
chemical homeostasis GO:0048878 292 0.026
intracellular protein transport GO:0006886 79 0.026
regulation of protein localization GO:0032880 81 0.026
cation transmembrane transport GO:0098655 263 0.025
positive regulation of protein phosphorylation GO:0001934 135 0.025
regulation of hydrolase activity GO:0051336 143 0.025
endocytosis GO:0006897 84 0.025
negative regulation of phosphate metabolic process GO:0045936 80 0.025
axon development GO:0061564 96 0.025
aromatic compound catabolic process GO:0019439 168 0.024
circulatory system process GO:0003013 183 0.024
nucleoside monophosphate metabolic process GO:0009123 93 0.024
purine nucleoside monophosphate metabolic process GO:0009126 84 0.024
negative regulation of cellular metabolic process GO:0031324 281 0.024
organic acid biosynthetic process GO:0016053 83 0.024
positive regulation of neuron differentiation GO:0045666 126 0.024
organelle localization GO:0051640 55 0.024
peptidyl tyrosine modification GO:0018212 72 0.024
g protein coupled receptor signaling pathway GO:0007186 242 0.024
negative regulation of phosphorus metabolic process GO:0010563 80 0.024
regulation of cellular amino acid metabolic process GO:0006521 2 0.023
regulation of protein modification process GO:0031399 194 0.023
multi organism reproductive process GO:0044703 262 0.023
regulation of nucleotide metabolic process GO:0006140 117 0.023
single organism cellular localization GO:1902580 102 0.023
nucleobase containing compound catabolic process GO:0034655 152 0.023
receptor metabolic process GO:0043112 18 0.023
cell morphogenesis GO:0000902 142 0.023
glycosyl compound metabolic process GO:1901657 182 0.023
cytoplasmic transport GO:0016482 115 0.023
monocarboxylic acid metabolic process GO:0032787 152 0.023
axis specification GO:0009798 4 0.023
positive regulation of programmed cell death GO:0043068 157 0.022
monovalent inorganic cation transport GO:0015672 172 0.022
regulation of neuron apoptotic process GO:0043523 83 0.022
glycosyl compound catabolic process GO:1901658 126 0.022
protein dephosphorylation GO:0006470 38 0.022
energy derivation by oxidation of organic compounds GO:0015980 46 0.022
transmembrane receptor protein tyrosine kinase signaling pathway GO:0007169 85 0.022
divalent inorganic cation transport GO:0072511 134 0.022
establishment of protein localization GO:0045184 141 0.022
cellular calcium ion homeostasis GO:0006874 160 0.022
negative regulation of macromolecule metabolic process GO:0010605 260 0.021
cyclic nucleotide metabolic process GO:0009187 80 0.021
regulation of nucleic acid templated transcription GO:1903506 380 0.021
regulation of cellular ketone metabolic process GO:0010565 27 0.021
oxidation reduction process GO:0055114 304 0.021
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.021
guanosine containing compound metabolic process GO:1901068 74 0.020
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.020
peptidyl tyrosine phosphorylation GO:0018108 72 0.020
guanosine containing compound catabolic process GO:1901069 71 0.020
nucleotide biosynthetic process GO:0009165 98 0.020
nucleotide catabolic process GO:0009166 139 0.020
response to nutrient levels GO:0031667 370 0.020
positive regulation of cellular amine metabolic process GO:0033240 3 0.020
ribonucleoside diphosphate metabolic process GO:0009185 10 0.020
regulation of protein metabolic process GO:0051246 289 0.020
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.020
regulation of receptor mediated endocytosis GO:0048259 17 0.020
regulation of cyclic nucleotide biosynthetic process GO:0030802 45 0.020
regulation of secretion by cell GO:1903530 208 0.020
metal ion homeostasis GO:0055065 186 0.020
cell morphogenesis involved in differentiation GO:0000904 119 0.020
cellular component movement GO:0006928 248 0.020
gtp catabolic process GO:0006184 71 0.020
positive regulation of nucleotide metabolic process GO:0045981 91 0.020
rna biosynthetic process GO:0032774 380 0.019
membrane organization GO:0061024 94 0.019
positive regulation of signaling GO:0023056 270 0.019
positive regulation of transcription dna templated GO:0045893 197 0.019
tissue development GO:0009888 252 0.019
rna metabolic process GO:0016070 406 0.019
apoptotic process GO:0006915 381 0.019
eye development GO:0001654 50 0.019
cellular response to endogenous stimulus GO:0071495 377 0.019
cellular macromolecule localization GO:0070727 122 0.019
negative regulation of neuron apoptotic process GO:0043524 45 0.019
response to alkaloid GO:0043279 132 0.019
organic acid transport GO:0015849 116 0.019
amine metabolic process GO:0009308 38 0.019
negative regulation of catalytic activity GO:0043086 103 0.018
cell type specific apoptotic process GO:0097285 134 0.018
neurological system process GO:0050877 219 0.018
positive regulation of catalytic activity GO:0043085 184 0.018
negative regulation of response to stimulus GO:0048585 155 0.018
axonogenesis GO:0007409 71 0.018
exocytosis GO:0006887 60 0.018
single organism carbohydrate metabolic process GO:0044723 118 0.018
protein autophosphorylation GO:0046777 66 0.018
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.018
nucleoside triphosphate catabolic process GO:0009143 123 0.018
cellular amine metabolic process GO:0044106 38 0.018
purine ribonucleoside biosynthetic process GO:0046129 21 0.017
regulation of purine nucleotide catabolic process GO:0033121 65 0.017
response to oxidative stress GO:0006979 186 0.017
gamete generation GO:0007276 124 0.017
multicellular organism growth GO:0035264 1 0.017
sexual reproduction GO:0019953 148 0.017
anterior posterior pattern specification GO:0009952 1 0.017
response to glucose GO:0009749 136 0.017
cellular response to extracellular stimulus GO:0031668 73 0.017
negative regulation of neuron death GO:1901215 69 0.017
positive regulation of protein metabolic process GO:0051247 178 0.017
cell activation GO:0001775 97 0.017
regulation of rna metabolic process GO:0051252 391 0.016
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.016
retina morphogenesis in camera type eye GO:0060042 1 0.016
ribonucleoside monophosphate metabolic process GO:0009161 88 0.016
regulation of calcium ion transport GO:0051924 77 0.016
localization of cell GO:0051674 202 0.016
regulation of anatomical structure size GO:0090066 135 0.016
response to ketone GO:1901654 182 0.016
embryonic axis specification GO:0000578 1 0.016
regulation of cellular component biogenesis GO:0044087 86 0.016
reproduction GO:0000003 245 0.016
ribonucleoside triphosphate catabolic process GO:0009203 122 0.016
purine ribonucleoside catabolic process GO:0046130 124 0.016
cellular nitrogen compound catabolic process GO:0044270 163 0.016
regulation of camp biosynthetic process GO:0030817 38 0.016
nucleoside catabolic process GO:0009164 126 0.016
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.016
positive regulation of cell projection organization GO:0031346 111 0.016
purine nucleoside biosynthetic process GO:0042451 21 0.015
nucleoside diphosphate metabolic process GO:0009132 14 0.015
positive regulation of rna biosynthetic process GO:1902680 197 0.015
response to radiation GO:0009314 137 0.015
nucleoside monophosphate biosynthetic process GO:0009124 28 0.015
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.015
transcription dna templated GO:0006351 377 0.015
response to extracellular stimulus GO:0009991 380 0.015
ribonucleoside catabolic process GO:0042454 126 0.015
positive regulation of monooxygenase activity GO:0032770 5 0.015
olfactory behavior GO:0042048 2 0.015
embryonic pattern specification GO:0009880 1 0.015
purine nucleotide catabolic process GO:0006195 136 0.015
response to hydrogen peroxide GO:0042542 89 0.015
axon cargo transport GO:0008088 1 0.015
negative regulation of multicellular organismal process GO:0051241 203 0.015
proteolysis GO:0006508 175 0.015
secretion by cell GO:0032940 248 0.014
cellular metal ion homeostasis GO:0006875 172 0.014
purine ribonucleotide catabolic process GO:0009154 136 0.014
regulation of developmental growth GO:0048638 45 0.014
calcium ion transport GO:0006816 131 0.014
heterocycle catabolic process GO:0046700 167 0.014
regulation of intracellular signal transduction GO:1902531 218 0.014
regulation of phosphorylation GO:0042325 248 0.014
positive regulation of cell death GO:0010942 184 0.014
nucleoside phosphate catabolic process GO:1901292 140 0.014
cyclic purine nucleotide metabolic process GO:0052652 62 0.014
regulation of anatomical structure morphogenesis GO:0022603 141 0.014
positive regulation of purine nucleotide biosynthetic process GO:1900373 36 0.014
cell projection morphogenesis GO:0048858 123 0.014
cytoskeleton organization GO:0007010 111 0.014
regulation of transferase activity GO:0051338 123 0.014
positive regulation of biosynthetic process GO:0009891 319 0.014
respiratory system development GO:0060541 45 0.014
positive regulation of phosphorylation GO:0042327 177 0.013
regulation of protein complex assembly GO:0043254 33 0.013
negative regulation of neuron differentiation GO:0045665 62 0.013
regulation of immune system process GO:0002682 123 0.013
regulation of cell activation GO:0050865 50 0.013
regulation of purine nucleotide biosynthetic process GO:1900371 46 0.013
regulation of cell migration GO:0030334 128 0.013
positive regulation of protein modification process GO:0031401 142 0.013
cation homeostasis GO:0055080 195 0.013
negative regulation of programmed cell death GO:0043069 183 0.013
protein transport GO:0015031 132 0.013
response to growth factor GO:0070848 189 0.013
regulation of cellular amine metabolic process GO:0033238 8 0.013
g protein coupled receptor internalization GO:0002031 3 0.013
meiotic cell cycle process GO:1903046 3 0.013
positive regulation of cell proliferation GO:0008284 249 0.013
neuromuscular synaptic transmission GO:0007274 2 0.013
regulation of establishment of protein localization GO:0070201 69 0.013
hexose metabolic process GO:0019318 58 0.013
regulation of meiotic cell cycle GO:0051445 3 0.013
positive regulation of cell communication GO:0010647 271 0.012
negative regulation of protein metabolic process GO:0051248 114 0.012
synaptic growth at neuromuscular junction GO:0051124 1 0.012
cyclic nucleotide biosynthetic process GO:0009190 63 0.012
multicellular organism reproduction GO:0032504 233 0.012
eye morphogenesis GO:0048592 4 0.012
regulation of cell morphogenesis GO:0022604 77 0.012
negative regulation of cell communication GO:0010648 158 0.012
rho protein signal transduction GO:0007266 11 0.012
regulation of transmembrane transport GO:0034762 122 0.012
autophagy GO:0006914 19 0.012
aging GO:0007568 241 0.012
camp metabolic process GO:0046058 63 0.012
calcium ion transmembrane transport GO:0070588 70 0.012
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.012
organonitrogen compound catabolic process GO:1901565 179 0.012
muscle contraction GO:0006936 88 0.012
glucose homeostasis GO:0042593 75 0.012
regulation of jun kinase activity GO:0043506 10 0.012
negative regulation of cellular component organization GO:0051129 83 0.012
cognition GO:0050890 92 0.012
telencephalon development GO:0021537 62 0.012
positive regulation of cellular component biogenesis GO:0044089 55 0.012
negative regulation of cellular protein metabolic process GO:0032269 106 0.012
male gamete generation GO:0048232 99 0.012
cell migration GO:0016477 197 0.012
enzyme linked receptor protein signaling pathway GO:0007167 116 0.012
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.012
positive regulation of rna metabolic process GO:0051254 203 0.011
regulation of growth GO:0040008 105 0.011
positive regulation of hydrolase activity GO:0051345 86 0.011
growth GO:0040007 165 0.011
asymmetric protein localization GO:0008105 2 0.011
cellular response to hormone stimulus GO:0032870 247 0.011
receptor internalization GO:0031623 14 0.011
positive regulation of nucleoside metabolic process GO:0045979 55 0.011
nitrogen compound transport GO:0071705 229 0.011
purine nucleoside diphosphate metabolic process GO:0009135 9 0.011
regulation of kinase activity GO:0043549 117 0.011
regulation of homeostatic process GO:0032844 101 0.011
cell growth GO:0016049 104 0.011
jak stat cascade GO:0007259 26 0.011
cell part morphogenesis GO:0032990 123 0.011
regulation of transporter activity GO:0032409 50 0.011
response to axon injury GO:0048678 59 0.011
regulation of system process GO:0044057 208 0.011
negative regulation of response to nutrient levels GO:0032108 7 0.011
phosphatidylinositol dephosphorylation GO:0046856 4 0.011
spermatogenesis GO:0007283 99 0.011
purine containing compound catabolic process GO:0072523 138 0.011
adult locomotory behavior GO:0008344 4 0.011
vesicle organization GO:0016050 29 0.011
motor neuron axon guidance GO:0008045 1 0.011
multicellular organismal reproductive process GO:0048609 233 0.011
developmental maturation GO:0021700 25 0.011
regulation of glucose transport GO:0010827 18 0.011
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.011
response to inorganic substance GO:0010035 377 0.011
cellular carbohydrate metabolic process GO:0044262 72 0.010
negative regulation of innate immune response GO:0045824 4 0.010
ion homeostasis GO:0050801 212 0.010
ion transmembrane transport GO:0034220 365 0.010
carbohydrate derivative catabolic process GO:1901136 147 0.010
response to hexose GO:0009746 144 0.010
immune response GO:0006955 104 0.010
cellular cation homeostasis GO:0030003 180 0.010
terminal button organization GO:0072553 3 0.010
chemosensory behavior GO:0007635 2 0.010
regulation of response to stress GO:0080134 126 0.010
carboxylic acid transport GO:0046942 115 0.010
positive regulation of ion transport GO:0043270 94 0.010
regulation of intracellular transport GO:0032386 65 0.010
carboxylic acid biosynthetic process GO:0046394 83 0.010
positive regulation of nucleic acid templated transcription GO:1903508 197 0.010
regulation of synaptic plasticity GO:0048167 70 0.010
inorganic cation transmembrane transport GO:0098662 202 0.010
cell cycle checkpoint GO:0000075 2 0.010
response to carbohydrate GO:0009743 183 0.010
response to estrogen GO:0043627 232 0.010

Calm3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
inherited metabolic disorder DOID:655 0 0.027
carbohydrate metabolic disorder DOID:2978 0 0.027
disease of metabolism DOID:0014667 0 0.027
nervous system disease DOID:863 0 0.017
central nervous system disease DOID:331 0 0.017
disease of anatomical entity DOID:7 0 0.017