Rattus norvegicus

0 known processes

Nid1

nidogen 1

(Aliases: Nid)

Nid1 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
cellular component biogenesis GO:0044085 368 0.089
regeneration GO:0031099 163 0.072
oxoacid metabolic process GO:0043436 290 0.068
regulation of cellular component organization GO:0051128 368 0.068
positive regulation of cell differentiation GO:0045597 217 0.067
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.066
urogenital system development GO:0001655 78 0.065
Mouse
ribose phosphate metabolic process GO:0019693 235 0.065
positive regulation of phosphorus metabolic process GO:0010562 262 0.064
purine ribonucleotide metabolic process GO:0009150 227 0.063
cell migration GO:0016477 197 0.062
Worm
reproductive process GO:0022414 372 0.061
positive regulation of cell communication GO:0010647 271 0.060
single organism biosynthetic process GO:0044711 342 0.059
response to corticosteroid GO:0031960 235 0.059
anterior posterior pattern specification GO:0009952 1 0.058
single organism reproductive process GO:0044702 297 0.058
regulation of intracellular signal transduction GO:1902531 218 0.057
nucleobase containing small molecule metabolic process GO:0055086 316 0.057
apoptotic process GO:0006915 381 0.053
cellular component movement GO:0006928 248 0.053
Worm
carbohydrate derivative metabolic process GO:1901135 346 0.052
positive regulation of cell migration GO:0030335 96 0.052
localization of cell GO:0051674 202 0.050
Worm
neuron differentiation GO:0030182 368 0.050
regulation of neuron differentiation GO:0045664 208 0.049
regulation of phosphate metabolic process GO:0019220 349 0.049
tissue development GO:0009888 252 0.048
response to peptide hormone GO:0043434 278 0.046
macromolecular complex subunit organization GO:0043933 339 0.046
positive regulation of developmental process GO:0051094 283 0.046
positive regulation of multicellular organismal process GO:0051240 387 0.045
organic acid metabolic process GO:0006082 292 0.045
positive regulation of protein modification process GO:0031401 142 0.045
cellular response to endogenous stimulus GO:0071495 377 0.044
central nervous system development GO:0007417 311 0.044
regulation of phosphorus metabolic process GO:0051174 349 0.043
macromolecule localization GO:0033036 252 0.043
Worm
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.041
regulation of cell differentiation GO:0045595 320 0.041
response to peptide GO:1901652 292 0.040
nucleoside phosphate metabolic process GO:0006753 283 0.040
purine nucleotide metabolic process GO:0006163 229 0.040
carboxylic acid metabolic process GO:0019752 289 0.040
regulation of signal transduction GO:0009966 318 0.039
organophosphate metabolic process GO:0019637 370 0.039
negative regulation of macromolecule metabolic process GO:0010605 260 0.039
negative regulation of metabolic process GO:0009892 331 0.039
regulation of cell projection organization GO:0031344 175 0.038
regulation of cell proliferation GO:0042127 359 0.038
nucleotide metabolic process GO:0009117 279 0.038
anatomical structure morphogenesis GO:0009653 298 0.038
response to extracellular stimulus GO:0009991 380 0.037
locomotion GO:0040011 237 0.037
Worm
ribonucleotide metabolic process GO:0009259 231 0.036
vesicle mediated transport GO:0016192 181 0.035
response to estrogen GO:0043627 232 0.035
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.035
regulation of apoptotic process GO:0042981 335 0.034
purine containing compound metabolic process GO:0072521 253 0.034
cellular amino acid metabolic process GO:0006520 107 0.033
organic cyclic compound catabolic process GO:1901361 175 0.033
protein transport GO:0015031 132 0.033
response to oxygen levels GO:0070482 265 0.033
response to molecule of bacterial origin GO:0002237 194 0.032
intracellular signal transduction GO:0035556 314 0.032
positive regulation of response to stimulus GO:0048584 285 0.032
establishment of protein localization GO:0045184 141 0.032
cellular response to growth factor stimulus GO:0071363 162 0.032
response to estradiol GO:0032355 164 0.032
positive regulation of signaling GO:0023056 270 0.031
organic substance catabolic process GO:1901575 316 0.031
regulation of cellular component movement GO:0051270 150 0.031
regulation of phosphorylation GO:0042325 248 0.031
cell cycle GO:0007049 101 0.030
cell projection organization GO:0030030 302 0.030
positive regulation of cellular biosynthetic process GO:0031328 295 0.030
organelle organization GO:0006996 266 0.030
response to glucocorticoid GO:0051384 223 0.030
single organism intracellular transport GO:1902582 166 0.029
multi organism reproductive process GO:0044703 262 0.029
organophosphate catabolic process GO:0046434 148 0.029
regulation of neurogenesis GO:0050767 247 0.029
regulation of mesenchymal cell proliferation GO:0010464 4 0.028
nucleotide biosynthetic process GO:0009165 98 0.028
carbohydrate derivative biosynthetic process GO:1901137 124 0.028
regulation of nucleotide metabolic process GO:0006140 117 0.028
cation transmembrane transport GO:0098655 263 0.028
nucleoside phosphate biosynthetic process GO:1901293 102 0.028
cell motility GO:0048870 202 0.028
Worm
positive regulation of nervous system development GO:0051962 178 0.027
protein phosphorylation GO:0006468 345 0.027
positive regulation of protein metabolic process GO:0051247 178 0.027
nucleoside metabolic process GO:0009116 179 0.027
brain development GO:0007420 247 0.027
reproduction GO:0000003 245 0.027
programmed cell death GO:0012501 392 0.027
head development GO:0060322 247 0.027
single organism organelle organization GO:1902589 180 0.027
mesoderm development GO:0007498 2 0.026
aromatic compound catabolic process GO:0019439 168 0.026
multicellular organism reproduction GO:0032504 233 0.026
neuron development GO:0048666 286 0.026
negative regulation of cell death GO:0060548 229 0.026
regulation of neuron death GO:1901214 115 0.026
amine metabolic process GO:0009308 38 0.026
multicellular organismal reproductive process GO:0048609 233 0.026
heterocycle catabolic process GO:0046700 167 0.026
regulation of locomotion GO:0040012 148 0.026
regulation of cell development GO:0060284 263 0.026
cellular component assembly GO:0022607 360 0.026
regulation of cellular amine metabolic process GO:0033238 8 0.026
cellular amine metabolic process GO:0044106 38 0.025
positive regulation of biosynthetic process GO:0009891 319 0.025
signal release GO:0023061 145 0.025
regulation of membrane potential GO:0042391 110 0.025
positive regulation of locomotion GO:0040017 102 0.025
purine nucleoside triphosphate catabolic process GO:0009146 122 0.025
macromolecular complex assembly GO:0065003 273 0.025
response to acid chemical GO:0001101 222 0.025
forebrain development GO:0030900 98 0.025
cellular nitrogen compound catabolic process GO:0044270 163 0.024
neuron projection development GO:0031175 273 0.024
camp metabolic process GO:0046058 63 0.024
positive regulation of phosphate metabolic process GO:0045937 262 0.024
regulation of multicellular organismal development GO:2000026 376 0.024
regulation of molecular function GO:0065009 398 0.024
epithelium development GO:0060429 96 0.024
gliogenesis GO:0042063 93 0.024
tissue regeneration GO:0042246 36 0.024
single organism catabolic process GO:0044712 283 0.024
regulation of stem cell differentiation GO:2000736 2 0.024
cytosolic calcium ion homeostasis GO:0051480 140 0.024
positive regulation of cell development GO:0010720 176 0.024
purine ribonucleotide biosynthetic process GO:0009152 81 0.024
regulation of cell motility GO:2000145 131 0.024
organonitrogen compound biosynthetic process GO:1901566 167 0.023
regulation of cellular ketone metabolic process GO:0010565 27 0.023
positive regulation of signal transduction GO:0009967 175 0.023
anatomical structure formation involved in morphogenesis GO:0048646 83 0.023
blood circulation GO:0008015 183 0.023
positive regulation of neuron differentiation GO:0045666 126 0.023
extracellular matrix organization GO:0030198 13 0.023
Mouse
positive regulation of transport GO:0051050 245 0.023
negative regulation of multicellular organismal process GO:0051241 203 0.023
cellular response to nitrogen compound GO:1901699 210 0.023
positive regulation of cell proliferation GO:0008284 249 0.023
ribonucleoside metabolic process GO:0009119 174 0.022
response to radiation GO:0009314 137 0.022
response to lipopolysaccharide GO:0032496 191 0.022
negative regulation of cell differentiation GO:0045596 99 0.022
homeostatic process GO:0042592 331 0.022
wound healing GO:0042060 122 0.022
positive regulation of phosphorylation GO:0042327 177 0.022
intracellular transport GO:0046907 185 0.022
negative regulation of cellular protein metabolic process GO:0032269 106 0.022
multi multicellular organism process GO:0044706 138 0.022
positive regulation of intracellular signal transduction GO:1902533 138 0.022
cellular macromolecule localization GO:0070727 122 0.021
glycosyl compound metabolic process GO:1901657 182 0.021
cellular response to hormone stimulus GO:0032870 247 0.021
purine ribonucleoside catabolic process GO:0046130 124 0.021
positive regulation of neurogenesis GO:0050769 165 0.021
response to decreased oxygen levels GO:0036293 237 0.021
positive regulation of cellular component organization GO:0051130 200 0.021
regulation of catalytic activity GO:0050790 304 0.021
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.021
positive regulation of nucleic acid templated transcription GO:1903508 197 0.021
cellular response to peptide hormone stimulus GO:0071375 120 0.021
regulation of nervous system development GO:0051960 264 0.021
response to external biotic stimulus GO:0043207 221 0.020
ribonucleotide biosynthetic process GO:0009260 85 0.020
nucleotide catabolic process GO:0009166 139 0.020
cellular response to insulin stimulus GO:0032869 81 0.020
metanephric mesenchymal cell migration GO:0035789 2 0.020
response to nutrient levels GO:0031667 370 0.020
embryonic pattern specification GO:0009880 1 0.020
response to other organism GO:0051707 220 0.020
protein oligomerization GO:0051259 191 0.020
regulation of mapk cascade GO:0043408 116 0.020
cyclic nucleotide metabolic process GO:0009187 80 0.020
aging GO:0007568 241 0.020
transmembrane transport GO:0055085 412 0.019
regulation of purine nucleotide metabolic process GO:1900542 115 0.019
response to growth factor GO:0070848 189 0.019
axis specification GO:0009798 4 0.019
nucleoside triphosphate metabolic process GO:0009141 144 0.019
regulation of hormone levels GO:0010817 187 0.019
response to glucose GO:0009749 136 0.019
protein complex biogenesis GO:0070271 263 0.019
organ regeneration GO:0031100 101 0.019
camp biosynthetic process GO:0006171 47 0.019
positive regulation of cell projection organization GO:0031346 111 0.019
growth GO:0040007 165 0.019
mesenchymal cell proliferation GO:0010463 4 0.019
regulation of hormone secretion GO:0046883 106 0.018
purine ribonucleoside metabolic process GO:0046128 168 0.018
developmental process involved in reproduction GO:0003006 159 0.018
response to wounding GO:0009611 254 0.018
positive regulation of cellular amine metabolic process GO:0033240 3 0.018
ribonucleoside triphosphate catabolic process GO:0009203 122 0.018
positive regulation of rna biosynthetic process GO:1902680 197 0.018
response to hypoxia GO:0001666 231 0.018
positive regulation of catalytic activity GO:0043085 184 0.018
positive regulation of cellular component movement GO:0051272 102 0.018
limbic system development GO:0021761 38 0.018
cardiovascular system development GO:0072358 134 0.018
response to bacterium GO:0009617 200 0.018
regulation of purine nucleotide biosynthetic process GO:1900371 46 0.018
organophosphate biosynthetic process GO:0090407 143 0.018
ribose phosphate biosynthetic process GO:0046390 87 0.018
glycosyl compound catabolic process GO:1901658 126 0.018
regulation of programmed cell death GO:0043067 341 0.018
cell type specific apoptotic process GO:0097285 134 0.018
muscle structure development GO:0061061 87 0.018
regulation of cellular amino acid metabolic process GO:0006521 2 0.017
response to cytokine GO:0034097 215 0.017
cardiac conduction GO:0061337 2 0.017
alpha amino acid metabolic process GO:1901605 71 0.017
nucleoside phosphate catabolic process GO:1901292 140 0.017
negative regulation of cellular metabolic process GO:0031324 281 0.017
cellular catabolic process GO:0044248 295 0.017
regulation of protein modification process GO:0031399 194 0.017
response to nutrient GO:0007584 248 0.017
negative regulation of neuron death GO:1901215 69 0.017
regulation of cell growth GO:0001558 85 0.017
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.017
purine ribonucleotide catabolic process GO:0009154 136 0.017
response to mechanical stimulus GO:0009612 134 0.017
negative regulation of programmed cell death GO:0043069 183 0.017
salivary gland morphogenesis GO:0007435 1 0.017
cation transport GO:0006812 382 0.017
gtp metabolic process GO:0046039 72 0.017
transcription dna templated GO:0006351 377 0.017
cellular homeostasis GO:0019725 252 0.016
regulation of rna metabolic process GO:0051252 391 0.016
response to inorganic substance GO:0010035 377 0.016
regulation of cellular localization GO:0060341 263 0.016
cell morphogenesis GO:0000902 142 0.016
divalent inorganic cation homeostasis GO:0072507 165 0.016
chemical homeostasis GO:0048878 292 0.016
cell adhesion GO:0007155 110 0.016
Mouse
transcription from rna polymerase ii promoter GO:0006366 252 0.016
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.016
cell morphogenesis involved in differentiation GO:0000904 119 0.016
regulation of dna metabolic process GO:0051052 60 0.016
cellular component morphogenesis GO:0032989 155 0.016
negative regulation of apoptotic process GO:0043066 181 0.016
gastrulation GO:0007369 2 0.016
cellular response to glucocorticoid stimulus GO:0071385 68 0.016
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.016
regulation of anatomical structure morphogenesis GO:0022603 141 0.016
positive regulation of transcription dna templated GO:0045893 197 0.016
purine containing compound biosynthetic process GO:0072522 85 0.016
negative regulation of gene expression GO:0010629 199 0.015
cell growth GO:0016049 104 0.015
cell cell signaling GO:0007267 335 0.015
Worm
purine nucleoside metabolic process GO:0042278 169 0.015
regulation of blood pressure GO:0008217 83 0.015
regulation of secretion GO:0051046 224 0.015
response to vitamin GO:0033273 131 0.015
catabolic process GO:0009056 351 0.015
multicellular organism growth GO:0035264 1 0.015
response to insulin GO:0032868 133 0.015
protein complex subunit organization GO:0071822 302 0.015
dna metabolic process GO:0006259 96 0.015
chromosome segregation GO:0007059 2 0.015
response to biotic stimulus GO:0009607 226 0.015
ion transmembrane transport GO:0034220 365 0.015
cyclic nucleotide biosynthetic process GO:0009190 63 0.015
actin cytoskeleton organization GO:0030036 73 0.015
enzyme linked receptor protein signaling pathway GO:0007167 116 0.015
positive regulation of kinase activity GO:0033674 77 0.015
regulation of peptide hormone secretion GO:0090276 80 0.015
regulation of ion transport GO:0043269 245 0.014
cytoplasmic transport GO:0016482 115 0.014
positive regulation of protein phosphorylation GO:0001934 135 0.014
purine containing compound catabolic process GO:0072523 138 0.014
regulation of growth GO:0040008 105 0.014
nucleic acid templated transcription GO:0097659 379 0.014
nucleobase containing compound catabolic process GO:0034655 152 0.014
positive regulation of mapk cascade GO:0043410 92 0.014
anion transport GO:0006820 178 0.014
cellular response to oxygen containing compound GO:1901701 386 0.014
sexual reproduction GO:0019953 148 0.014
protein homooligomerization GO:0051260 91 0.014
cellular response to stress GO:0033554 269 0.014
negative regulation of cellular biosynthetic process GO:0031327 161 0.014
membrane organization GO:0061024 94 0.014
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.014
regulation of protein transport GO:0051223 68 0.014
connective tissue development GO:0061448 33 0.014
metal ion homeostasis GO:0055065 186 0.014
regulation of protein metabolic process GO:0051246 289 0.014
positive regulation of cellular protein metabolic process GO:0032270 167 0.014
cellular response to abiotic stimulus GO:0071214 85 0.014
single organism membrane organization GO:0044802 74 0.014
cyclic purine nucleotide metabolic process GO:0052652 62 0.014
negative regulation of cardiac muscle tissue development GO:0055026 3 0.014
secretion GO:0046903 307 0.014
negative regulation of nervous system development GO:0051961 79 0.014
bmp signaling pathway GO:0030509 4 0.013
cellular response to organic cyclic compound GO:0071407 202 0.013
glial cell differentiation GO:0010001 65 0.013
negative regulation of cell communication GO:0010648 158 0.013
lipid metabolic process GO:0006629 283 0.013
protein localization GO:0008104 191 0.013
Worm
vasculogenesis GO:0001570 3 0.013
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.013
neurological system process GO:0050877 219 0.013
organic anion transport GO:0015711 132 0.013
negative regulation of signaling GO:0023057 157 0.013
regulation of nucleotide biosynthetic process GO:0030808 47 0.013
nitrogen compound transport GO:0071705 229 0.013
regulation of cell cycle GO:0051726 73 0.013
regulation of camp metabolic process GO:0030814 43 0.013
calcium ion transport GO:0006816 131 0.013
mitotic cell cycle GO:0000278 49 0.013
small gtpase mediated signal transduction GO:0007264 36 0.013
divalent inorganic cation transport GO:0072511 134 0.013
cellular ketone metabolic process GO:0042180 51 0.013
taxis GO:0042330 67 0.013
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathway GO:0090101 2 0.013
organonitrogen compound catabolic process GO:1901565 179 0.012
divalent metal ion transport GO:0070838 132 0.012
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.012
regulation of cellular protein metabolic process GO:0032268 267 0.012
hormone transport GO:0009914 121 0.012
regulation of cell migration GO:0030334 128 0.012
response to ionizing radiation GO:0010212 59 0.012
formation of primary germ layer GO:0001704 1 0.012
response to carbohydrate GO:0009743 183 0.012
spindle organization GO:0007051 2 0.012
regulation of protein localization GO:0032880 81 0.012
meiotic cell cycle process GO:1903046 3 0.012
rna biosynthetic process GO:0032774 380 0.012
cellular response to organonitrogen compound GO:0071417 197 0.012
nucleoside catabolic process GO:0009164 126 0.012
negative regulation of phosphate metabolic process GO:0045936 80 0.012
negative regulation of response to stimulus GO:0048585 155 0.012
response to oxidative stress GO:0006979 186 0.012
motor neuron axon guidance GO:0008045 1 0.012
cytokine production GO:0001816 61 0.012
positive regulation of growth GO:0045927 55 0.012
neuron death GO:0070997 127 0.012
negative regulation of catalytic activity GO:0043086 103 0.012
purine nucleotide catabolic process GO:0006195 136 0.012
positive regulation of cell death GO:0010942 184 0.012
cytokine biosynthetic process GO:0042089 3 0.012
gamete generation GO:0007276 124 0.012
negative regulation of molecular function GO:0044092 133 0.012
renal system development GO:0072001 67 0.012
Mouse
female pregnancy GO:0007565 122 0.012
purine nucleoside triphosphate metabolic process GO:0009144 141 0.012
calcium ion homeostasis GO:0055074 162 0.011
response to monosaccharide GO:0034284 159 0.011
positive regulation of ion transport GO:0043270 94 0.011
negative regulation of cardiac muscle tissue growth GO:0055022 3 0.011
regulation of secretion by cell GO:1903530 208 0.011
positive regulation of immune system process GO:0002684 90 0.011
negative regulation of phosphorus metabolic process GO:0010563 80 0.011
secretion by cell GO:0032940 248 0.011
defense response GO:0006952 194 0.011
carbohydrate metabolic process GO:0005975 130 0.011
regulation of catabolic process GO:0009894 113 0.011
ribonucleoside triphosphate metabolic process GO:0009199 141 0.011
cell cycle process GO:0022402 57 0.011
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.011
negative regulation of secretion GO:0051048 82 0.011
kidney development GO:0001822 67 0.011
Mouse
regulation of cyclic nucleotide metabolic process GO:0030799 51 0.011
regulation of cyclic nucleotide biosynthetic process GO:0030802 45 0.011
ras protein signal transduction GO:0007265 29 0.011
neuron apoptotic process GO:0051402 88 0.011
positive regulation of gene expression GO:0010628 244 0.011
regulation of camp biosynthetic process GO:0030817 38 0.011
reproductive system development GO:0061458 128 0.011
mapk cascade GO:0000165 140 0.011
cellular divalent inorganic cation homeostasis GO:0072503 162 0.011
salivary gland development GO:0007431 3 0.011
action potential GO:0001508 54 0.011
sex differentiation GO:0007548 113 0.011
epithelial cell differentiation GO:0030855 71 0.011
male gamete generation GO:0048232 99 0.011
positive regulation of purine nucleotide biosynthetic process GO:1900373 36 0.011
immune system process GO:0002376 204 0.011
tongue morphogenesis GO:0043587 3 0.011
spermatogenesis GO:0007283 99 0.011
embryonic skeletal system development GO:0048706 3 0.011
carbohydrate derivative catabolic process GO:1901136 147 0.011
regulation of endothelial cell differentiation GO:0045601 4 0.011
cell part morphogenesis GO:0032990 123 0.010
muscle tissue development GO:0060537 58 0.010
skeletal muscle tissue development GO:0007519 31 0.010
regulation of response to stress GO:0080134 126 0.010
rna metabolic process GO:0016070 406 0.010
negative regulation of cell proliferation GO:0008285 119 0.010
anion transmembrane transport GO:0098656 77 0.010
positive regulation of cell growth GO:0030307 44 0.010
ribonucleoside catabolic process GO:0042454 126 0.010
regulation of canonical wnt signaling pathway GO:0060828 4 0.010
female sex differentiation GO:0046660 59 0.010
signal transduction by phosphorylation GO:0023014 144 0.010
camera type eye development GO:0043010 48 0.010
rhythmic process GO:0048511 156 0.010
carboxylic acid biosynthetic process GO:0046394 83 0.010
positive regulation of mesenchymal cell proliferation GO:0002053 4 0.010
purine nucleotide biosynthetic process GO:0006164 83 0.010
hormone secretion GO:0046879 115 0.010
ovulation cycle GO:0042698 67 0.010
response to hexose GO:0009746 144 0.010
positive regulation of nucleotide metabolic process GO:0045981 91 0.010
peptidyl tyrosine phosphorylation GO:0018108 72 0.010
negative regulation of organ growth GO:0046621 3 0.010
respiratory system development GO:0060541 45 0.010
regulation of cell morphogenesis GO:0022604 77 0.010
positive regulation of molecular function GO:0044093 230 0.010
eye morphogenesis GO:0048592 4 0.010
cellular response to steroid hormone stimulus GO:0071383 93 0.010
glomerular mesangial cell proliferation GO:0072110 4 0.010
telencephalon development GO:0021537 62 0.010
regulation of nucleic acid templated transcription GO:1903506 380 0.010
inorganic cation transmembrane transport GO:0098662 202 0.010

Nid1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
muscular disease DOID:0080000 0 0.014
disease of anatomical entity DOID:7 0 0.014
musculoskeletal system disease DOID:17 0 0.014
muscle tissue disease DOID:66 0 0.014
nervous system disease DOID:863 0 0.013