Rattus norvegicus

23 known processes

Nup54

nucleoporin 54

Nup54 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
positive regulation of transcription dna templated GO:0045893 197 0.084
transforming growth factor beta3 production GO:0032907 2 0.079
macromolecular complex subunit organization GO:0043933 339 0.071
cellular component assembly GO:0022607 360 0.068
transcription dna templated GO:0006351 377 0.067
cellular response to endogenous stimulus GO:0071495 377 0.065
positive regulation of biosynthetic process GO:0009891 319 0.065
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.063
protein complex assembly GO:0006461 263 0.055
cellular component biogenesis GO:0044085 368 0.054
regulation of cell differentiation GO:0045595 320 0.054
positive regulation of rna biosynthetic process GO:1902680 197 0.054
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.053
positive regulation of cellular biosynthetic process GO:0031328 295 0.052
rna metabolic process GO:0016070 406 0.050
programmed cell death GO:0012501 392 0.049
regulation of multicellular organismal development GO:2000026 376 0.047
positive regulation of gene expression GO:0010628 244 0.047
reproductive process GO:0022414 372 0.041
macromolecular complex assembly GO:0065003 273 0.041
central nervous system development GO:0007417 311 0.040
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.040
single organism biosynthetic process GO:0044711 342 0.039
regulation of rna metabolic process GO:0051252 391 0.039
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.038
regulation of cell development GO:0060284 263 0.038
regulation of programmed cell death GO:0043067 341 0.037
regulation of cell proliferation GO:0042127 359 0.037
developmental process involved in reproduction GO:0003006 159 0.036
protein complex subunit organization GO:0071822 302 0.036
multi organism reproductive process GO:0044703 262 0.032
regulation of transforming growth factor beta3 production GO:0032910 2 0.030
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.029
organonitrogen compound biosynthetic process GO:1901566 167 0.029
intracellular signal transduction GO:0035556 314 0.029
regulation of apoptotic process GO:0042981 335 0.028
protein complex biogenesis GO:0070271 263 0.028
transcription from rna polymerase ii promoter GO:0006366 252 0.028
negative regulation of programmed cell death GO:0043069 183 0.027
cellular macromolecular complex assembly GO:0034622 58 0.026
amine metabolic process GO:0009308 38 0.026
response to peptide hormone GO:0043434 278 0.026
cellular amine metabolic process GO:0044106 38 0.025
response to peptide GO:1901652 292 0.024
apoptotic process GO:0006915 381 0.024
cellular response to hormone stimulus GO:0032870 247 0.024
single organism reproductive process GO:0044702 297 0.024
response to oxygen levels GO:0070482 265 0.023
negative regulation of apoptotic process GO:0043066 181 0.023
regulation of cellular amine metabolic process GO:0033238 8 0.023
negative regulation of cellular metabolic process GO:0031324 281 0.023
response to hypoxia GO:0001666 231 0.022
regulation of cellular component organization GO:0051128 368 0.022
organophosphate biosynthetic process GO:0090407 143 0.022
negative regulation of macromolecule metabolic process GO:0010605 260 0.022
oxoacid metabolic process GO:0043436 290 0.021
cellular response to peptide GO:1901653 133 0.021
regulation of nervous system development GO:0051960 264 0.021
positive regulation of rna metabolic process GO:0051254 203 0.020
organelle organization GO:0006996 266 0.020
reproduction GO:0000003 245 0.020
response to acid chemical GO:0001101 222 0.019
response to growth factor GO:0070848 189 0.019
negative regulation of developmental process GO:0051093 125 0.019
cell projection organization GO:0030030 302 0.019
cellular response to growth factor stimulus GO:0071363 162 0.019
cellular response to nitrogen compound GO:1901699 210 0.019
positive regulation of nucleic acid templated transcription GO:1903508 197 0.019
gamete generation GO:0007276 124 0.019
regulation of cellular amino acid metabolic process GO:0006521 2 0.018
response to nutrient levels GO:0031667 370 0.018
neuron differentiation GO:0030182 368 0.018
multicellular organism reproduction GO:0032504 233 0.018
response to inorganic substance GO:0010035 377 0.018
head development GO:0060322 247 0.018
multicellular organismal reproductive process GO:0048609 233 0.018
positive regulation of transforming growth factor beta3 production GO:0032916 2 0.018
response to extracellular stimulus GO:0009991 380 0.017
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.017
macromolecule localization GO:0033036 252 0.017
positive regulation of response to stimulus GO:0048584 285 0.017
regulation of molecular function GO:0065009 398 0.017
neuron projection development GO:0031175 273 0.017
response to alkaloid GO:0043279 132 0.017
carbohydrate derivative biosynthetic process GO:1901137 124 0.017
negative regulation of response to stimulus GO:0048585 155 0.017
purine containing compound metabolic process GO:0072521 253 0.017
positive regulation of cell development GO:0010720 176 0.016
cellular response to stress GO:0033554 269 0.016
regulation of signal transduction GO:0009966 318 0.016
regulation of catalytic activity GO:0050790 304 0.016
positive regulation of cell proliferation GO:0008284 249 0.016
axis specification GO:0009798 4 0.016
nucleotide biosynthetic process GO:0009165 98 0.016
transmembrane transport GO:0055085 412 0.016
protein phosphorylation GO:0006468 345 0.015
nucleic acid templated transcription GO:0097659 379 0.015
protein localization GO:0008104 191 0.015
regulation of transcription dna templated GO:0006355 374 0.015
purine containing compound biosynthetic process GO:0072522 85 0.015
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.015
positive regulation of cellular protein metabolic process GO:0032270 167 0.015
regulation of neurogenesis GO:0050767 247 0.015
regulation of alternative mrna splicing via spliceosome GO:0000381 2 0.015
response to wounding GO:0009611 254 0.015
cellular amino acid metabolic process GO:0006520 107 0.015
regulation of rna biosynthetic process GO:2001141 381 0.015
neuron development GO:0048666 286 0.014
positive regulation of multicellular organismal process GO:0051240 387 0.014
cellular component movement GO:0006928 248 0.014
spermatogenesis GO:0007283 99 0.014
response to decreased oxygen levels GO:0036293 237 0.014
positive regulation of neurogenesis GO:0050769 165 0.014
carboxylic acid metabolic process GO:0019752 289 0.014
mrna processing GO:0006397 14 0.014
negative regulation of rna metabolic process GO:0051253 123 0.013
sex differentiation GO:0007548 113 0.013
positive regulation of developmental process GO:0051094 283 0.013
brain development GO:0007420 247 0.013
response to estrogen GO:0043627 232 0.013
carbohydrate metabolic process GO:0005975 130 0.013
regulation of cell projection organization GO:0031344 175 0.013
nucleoside phosphate biosynthetic process GO:1901293 102 0.013
positive regulation of cellular amine metabolic process GO:0033240 3 0.013
negative regulation of metabolic process GO:0009892 331 0.013
embryonic pattern specification GO:0009880 1 0.013
protein oligomerization GO:0051259 191 0.013
sexual reproduction GO:0019953 148 0.013
negative regulation of cell death GO:0060548 229 0.013
tissue development GO:0009888 252 0.013
regulation of nucleic acid templated transcription GO:1903506 380 0.012
growth GO:0040007 165 0.012
alternative mrna splicing via spliceosome GO:0000380 4 0.012
aging GO:0007568 241 0.012
anterior posterior pattern specification GO:0009952 1 0.012
positive regulation of apoptotic process GO:0043065 154 0.012
negative regulation of cell differentiation GO:0045596 99 0.012
enzyme linked receptor protein signaling pathway GO:0007167 116 0.012
organophosphate metabolic process GO:0019637 370 0.012
positive regulation of neuron projection development GO:0010976 99 0.012
male gamete generation GO:0048232 99 0.012
negative regulation of multicellular organismal process GO:0051241 203 0.012
regulation of neuron projection development GO:0010975 161 0.012
regulation of growth GO:0040008 105 0.011
regulation of mrna splicing via spliceosome GO:0048024 3 0.011
regulation of phosphorus metabolic process GO:0051174 349 0.011
negative regulation of signaling GO:0023057 157 0.011
positive regulation of phosphorus metabolic process GO:0010562 262 0.011
negative regulation of gene expression GO:0010629 199 0.011
negative regulation of cell proliferation GO:0008285 119 0.011
purine nucleotide biosynthetic process GO:0006164 83 0.011
negative regulation of cellular biosynthetic process GO:0031327 161 0.011
regulation of neuron differentiation GO:0045664 208 0.011
regulation of cellular ketone metabolic process GO:0010565 27 0.011
cellular response to oxygen containing compound GO:1901701 386 0.011
positive regulation of adherens junction organization GO:1903393 2 0.011
positive regulation of cell differentiation GO:0045597 217 0.011
positive regulation of nervous system development GO:0051962 178 0.011
male sex differentiation GO:0046661 64 0.011
single organism intracellular transport GO:1902582 166 0.011
positive regulation of molecular function GO:0044093 230 0.011
anatomical structure morphogenesis GO:0009653 298 0.011
negative regulation of nucleic acid templated transcription GO:1903507 117 0.011
reproductive system development GO:0061458 128 0.011
dephosphorylation GO:0016311 98 0.010
cellular response to peptide hormone stimulus GO:0071375 120 0.010
activation of cysteine type endopeptidase activity involved in apoptotic signaling pathway GO:0097296 1 0.010
cell type specific apoptotic process GO:0097285 134 0.010
organic acid metabolic process GO:0006082 292 0.010
cellular ketone metabolic process GO:0042180 51 0.010
regulation of cellular component biogenesis GO:0044087 86 0.010
embryonic axis specification GO:0000578 1 0.010
peptidyl amino acid modification GO:0018193 126 0.010
response to tumor necrosis factor GO:0034612 56 0.010
homeostatic process GO:0042592 331 0.010

Nup54 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.023
nervous system disease DOID:863 0 0.023
disease of metabolism DOID:0014667 0 0.013
central nervous system disease DOID:331 0 0.013
inherited metabolic disorder DOID:655 0 0.011
musculoskeletal system disease DOID:17 0 0.010