Rattus norvegicus

53 known processes

Pigm

phosphatidylinositol glycan anchor biosynthesis, class M

(Aliases: GPI-MT-I)

Pigm biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
organic acid metabolic process GO:0006082 292 0.112
lipid biosynthetic process GO:0008610 128 0.090
regulation of phosphorylation GO:0042325 248 0.084
cellular response to stress GO:0033554 269 0.084
secretion GO:0046903 307 0.084
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.082
intracellular signal transduction GO:0035556 314 0.079
single organism biosynthetic process GO:0044711 342 0.074
negative regulation of macromolecule metabolic process GO:0010605 260 0.070
oxoacid metabolic process GO:0043436 290 0.066
intracellular transport GO:0046907 185 0.064
negative regulation of cell death GO:0060548 229 0.063
carboxylic acid metabolic process GO:0019752 289 0.063
regulation of rna metabolic process GO:0051252 391 0.059
reproductive structure development GO:0048608 128 0.058
reproductive system development GO:0061458 128 0.058
regulation of phosphorus metabolic process GO:0051174 349 0.056
positive regulation of cell proliferation GO:0008284 249 0.055
cell cell signaling GO:0007267 335 0.055
cellular response to endogenous stimulus GO:0071495 377 0.053
cellular ion homeostasis GO:0006873 184 0.051
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.047
cellular lipid metabolic process GO:0044255 208 0.047
cellular amino acid metabolic process GO:0006520 107 0.045
macromolecular complex subunit organization GO:0043933 339 0.045
regulation of transcription dna templated GO:0006355 374 0.044
response to inorganic substance GO:0010035 377 0.044
apoptotic process GO:0006915 381 0.043
homeostatic process GO:0042592 331 0.043
aging GO:0007568 241 0.042
response to nutrient levels GO:0031667 370 0.041
cation homeostasis GO:0055080 195 0.041
regulation of protein metabolic process GO:0051246 289 0.041
response to extracellular stimulus GO:0009991 380 0.040
cellular calcium ion homeostasis GO:0006874 160 0.040
regulation of catalytic activity GO:0050790 304 0.040
macromolecular complex assembly GO:0065003 273 0.039
cellular response to oxygen containing compound GO:1901701 386 0.038
regulation of rna biosynthetic process GO:2001141 381 0.038
organophosphate metabolic process GO:0019637 370 0.038
negative regulation of metabolic process GO:0009892 331 0.037
response to metal ion GO:0010038 253 0.037
positive regulation of biosynthetic process GO:0009891 319 0.037
negative regulation of cellular metabolic process GO:0031324 281 0.036
lipid metabolic process GO:0006629 283 0.036
sex differentiation GO:0007548 113 0.035
regulation of secretion by cell GO:1903530 208 0.035
chemical homeostasis GO:0048878 292 0.035
single organism behavior GO:0044708 130 0.035
positive regulation of cellular biosynthetic process GO:0031328 295 0.034
negative regulation of rna metabolic process GO:0051253 123 0.034
cell projection organization GO:0030030 302 0.034
positive regulation of phosphorus metabolic process GO:0010562 262 0.034
negative regulation of multicellular organismal process GO:0051241 203 0.034
programmed cell death GO:0012501 392 0.034
negative regulation of apoptotic process GO:0043066 181 0.034
secretion by cell GO:0032940 248 0.034
rna biosynthetic process GO:0032774 380 0.033
protein phosphorylation GO:0006468 345 0.032
response to ionizing radiation GO:0010212 59 0.032
positive regulation of phosphorylation GO:0042327 177 0.032
regulation of phosphate metabolic process GO:0019220 349 0.032
regulation of protein modification process GO:0031399 194 0.032
negative regulation of signaling GO:0023057 157 0.031
negative regulation of gene expression GO:0010629 199 0.031
cation transport GO:0006812 382 0.031
positive regulation of nucleic acid templated transcription GO:1903508 197 0.030
regulation of apoptotic process GO:0042981 335 0.030
cellular carbohydrate metabolic process GO:0044262 72 0.030
rna metabolic process GO:0016070 406 0.030
response to nutrient GO:0007584 248 0.030
gastrulation GO:0007369 2 0.029
positive regulation of signaling GO:0023056 270 0.029
response to radiation GO:0009314 137 0.029
divalent inorganic cation homeostasis GO:0072507 165 0.029
positive regulation of transport GO:0051050 245 0.029
negative regulation of nucleic acid templated transcription GO:1903507 117 0.029
development of primary sexual characteristics GO:0045137 107 0.029
cellular catabolic process GO:0044248 295 0.029
mapk cascade GO:0000165 140 0.029
signal release GO:0023061 145 0.028
carbohydrate derivative metabolic process GO:1901135 346 0.028
regulation of secretion GO:0051046 224 0.028
regulation of protein phosphorylation GO:0001932 183 0.028
response to external biotic stimulus GO:0043207 221 0.027
neurological system process GO:0050877 219 0.027
developmental process involved in reproduction GO:0003006 159 0.027
response to reactive oxygen species GO:0000302 120 0.026
single organism intracellular transport GO:1902582 166 0.026
response to camp GO:0051591 91 0.026
protein complex assembly GO:0006461 263 0.026
regulation of intracellular signal transduction GO:1902531 218 0.026
regulation of molecular function GO:0065009 398 0.026
cellular modified amino acid metabolic process GO:0006575 61 0.026
cellular ketone metabolic process GO:0042180 51 0.026
response to estradiol GO:0032355 164 0.026
positive regulation of protein metabolic process GO:0051247 178 0.025
cytosolic calcium ion homeostasis GO:0051480 140 0.025
positive regulation of catalytic activity GO:0043085 184 0.025
nucleic acid templated transcription GO:0097659 379 0.025
g protein coupled receptor signaling pathway GO:0007186 242 0.025
response to peptide hormone GO:0043434 278 0.025
negative regulation of rna biosynthetic process GO:1902679 118 0.025
regulation of nucleic acid templated transcription GO:1903506 380 0.025
regulation of response to stress GO:0080134 126 0.024
protein complex biogenesis GO:0070271 263 0.024
alpha amino acid metabolic process GO:1901605 71 0.024
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.024
regulation of hormone levels GO:0010817 187 0.024
response to wounding GO:0009611 254 0.024
positive regulation of molecular function GO:0044093 230 0.024
response to purine containing compound GO:0014074 126 0.024
negative regulation of transcription dna templated GO:0045892 116 0.024
regulation of cellular protein metabolic process GO:0032268 267 0.023
metal ion homeostasis GO:0055065 186 0.023
cellular component assembly GO:0022607 360 0.023
neuron projection morphogenesis GO:0048812 122 0.023
reproductive process GO:0022414 372 0.023
catabolic process GO:0009056 351 0.023
positive regulation of signal transduction GO:0009967 175 0.023
sulfur compound metabolic process GO:0006790 70 0.022
negative regulation of programmed cell death GO:0043069 183 0.022
regulation of cellular ketone metabolic process GO:0010565 27 0.022
cellular response to nitrogen compound GO:1901699 210 0.022
cellular cation homeostasis GO:0030003 180 0.022
single organism reproductive process GO:0044702 297 0.022
cellular homeostasis GO:0019725 252 0.022
protein oligomerization GO:0051259 191 0.021
regulation of protein kinase activity GO:0045859 105 0.021
regulation of anatomical structure size GO:0090066 135 0.021
positive regulation of protein modification process GO:0031401 142 0.021
purine ribonucleoside metabolic process GO:0046128 168 0.021
ion homeostasis GO:0050801 212 0.021
positive regulation of multicellular organismal process GO:0051240 387 0.020
negative regulation of cell communication GO:0010648 158 0.020
anatomical structure morphogenesis GO:0009653 298 0.020
cellular divalent inorganic cation homeostasis GO:0072503 162 0.020
metal ion transport GO:0030001 289 0.020
response to growth factor GO:0070848 189 0.020
multicellular organism growth GO:0035264 1 0.020
cellular response to growth factor stimulus GO:0071363 162 0.020
small molecule biosynthetic process GO:0044283 124 0.020
immune system process GO:0002376 204 0.020
amine metabolic process GO:0009308 38 0.020
response to decreased oxygen levels GO:0036293 237 0.020
positive regulation of gene expression GO:0010628 244 0.020
positive regulation of response to stimulus GO:0048584 285 0.020
response to corticosteroid GO:0031960 235 0.020
organic acid biosynthetic process GO:0016053 83 0.020
vesicle mediated transport GO:0016192 181 0.020
response to glucocorticoid GO:0051384 223 0.019
response to other organism GO:0051707 220 0.019
positive regulation of protein phosphorylation GO:0001934 135 0.019
monocarboxylic acid metabolic process GO:0032787 152 0.019
positive regulation of cytosolic calcium ion concentration GO:0007204 122 0.019
cellular response to lipid GO:0071396 201 0.019
positive regulation of cellular protein metabolic process GO:0032270 167 0.019
negative regulation of cellular biosynthetic process GO:0031327 161 0.019
axis specification GO:0009798 4 0.019
regulation of programmed cell death GO:0043067 341 0.019
transcription dna templated GO:0006351 377 0.019
tissue development GO:0009888 252 0.019
response to cytokine GO:0034097 215 0.019
cellular response to hormone stimulus GO:0032870 247 0.018
nitrogen compound transport GO:0071705 229 0.018
response to oxidative stress GO:0006979 186 0.018
regulation of multicellular organismal development GO:2000026 376 0.018
calcium ion homeostasis GO:0055074 162 0.018
anterior posterior pattern specification GO:0009952 1 0.018
positive regulation of transferase activity GO:0051347 81 0.018
ribonucleoside metabolic process GO:0009119 174 0.018
positive regulation of secretion GO:0051047 140 0.018
positive regulation of phosphate metabolic process GO:0045937 262 0.018
transcription from rna polymerase ii promoter GO:0006366 252 0.018
cellular component biogenesis GO:0044085 368 0.018
divalent inorganic cation transport GO:0072511 134 0.017
dna metabolic process GO:0006259 96 0.017
response to organophosphorus GO:0046683 102 0.017
cellular amide metabolic process GO:0043603 44 0.017
hexose metabolic process GO:0019318 58 0.017
positive regulation of mapk cascade GO:0043410 92 0.017
regulation of cell proliferation GO:0042127 359 0.017
cellular amine metabolic process GO:0044106 38 0.017
macromolecule localization GO:0033036 252 0.017
protein complex subunit organization GO:0071822 302 0.017
positive regulation of rna metabolic process GO:0051254 203 0.017
formation of primary germ layer GO:0001704 1 0.017
negative regulation of biosynthetic process GO:0009890 168 0.017
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.016
cell type specific apoptotic process GO:0097285 134 0.016
regulation of cellular amine metabolic process GO:0033238 8 0.016
cellular metal ion homeostasis GO:0006875 172 0.016
digestive system development GO:0055123 41 0.016
positive regulation of secretion by cell GO:1903532 128 0.016
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.016
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.016
rhythmic process GO:0048511 156 0.016
neuron differentiation GO:0030182 368 0.016
reactive oxygen species metabolic process GO:0072593 37 0.016
cellular response to acid chemical GO:0071229 75 0.016
tube development GO:0035295 89 0.016
hormone metabolic process GO:0042445 69 0.016
glycosyl compound catabolic process GO:1901658 126 0.016
single organism carbohydrate metabolic process GO:0044723 118 0.016
response to estrogen GO:0043627 232 0.015
regulation of kinase activity GO:0043549 117 0.015
lipid storage GO:0019915 1 0.015
ion transmembrane transport GO:0034220 365 0.015
circadian rhythm GO:0007623 88 0.015
response to oxygen levels GO:0070482 265 0.015
gland development GO:0048732 155 0.015
signal transduction by phosphorylation GO:0023014 144 0.015
carbohydrate derivative biosynthetic process GO:1901137 124 0.015
intracellular protein transport GO:0006886 79 0.015
negative regulation of mitotic cell cycle phase transition GO:1901991 3 0.015
positive regulation of intracellular signal transduction GO:1902533 138 0.015
axonogenesis GO:0007409 71 0.015
neuron projection development GO:0031175 273 0.015
gonad development GO:0008406 104 0.015
positive regulation of cellular component organization GO:0051130 200 0.015
negative regulation of neuron death GO:1901215 69 0.015
regulation of protein localization GO:0032880 81 0.015
circadian regulation of gene expression GO:0032922 3 0.014
regulation of transferase activity GO:0051338 123 0.014
smooth muscle cell proliferation GO:0048659 77 0.014
central nervous system development GO:0007417 311 0.014
negative regulation of protein metabolic process GO:0051248 114 0.014
regulation of jun kinase activity GO:0043506 10 0.014
synaptic growth at neuromuscular junction GO:0051124 1 0.014
negative regulation of cellular protein metabolic process GO:0032269 106 0.014
regulation of neurotransmitter levels GO:0001505 42 0.014
embryonic pattern specification GO:0009880 1 0.014
regulation of signal transduction GO:0009966 318 0.014
regeneration GO:0031099 163 0.014
cytokine production GO:0001816 61 0.014
response to acid chemical GO:0001101 222 0.014
nucleoside metabolic process GO:0009116 179 0.014
carboxylic acid biosynthetic process GO:0046394 83 0.014
response to mechanical stimulus GO:0009612 134 0.014
ribose phosphate metabolic process GO:0019693 235 0.014
lipid localization GO:0010876 62 0.014
female pregnancy GO:0007565 122 0.014
negative regulation of extrinsic apoptotic signaling pathway GO:2001237 4 0.014
regulation of neuron death GO:1901214 115 0.014
nucleoside phosphate metabolic process GO:0006753 283 0.014
cytoplasmic transport GO:0016482 115 0.014
steroid metabolic process GO:0008202 73 0.014
cellular response to cytokine stimulus GO:0071345 127 0.014
divalent metal ion transport GO:0070838 132 0.013
purine containing compound metabolic process GO:0072521 253 0.013
rab protein signal transduction GO:0032482 1 0.013
carbohydrate metabolic process GO:0005975 130 0.013
regulation of map kinase activity GO:0043405 53 0.013
cellular chemical homeostasis GO:0055082 247 0.013
organonitrogen compound catabolic process GO:1901565 179 0.013
regulation of mapk cascade GO:0043408 116 0.013
neuron death GO:0070997 127 0.013
response to axon injury GO:0048678 59 0.013
glucose metabolic process GO:0006006 52 0.013
positive regulation of rna biosynthetic process GO:1902680 197 0.013
regulation of cellular amino acid metabolic process GO:0006521 2 0.013
nucleotide metabolic process GO:0009117 279 0.013
sexual reproduction GO:0019953 148 0.013
spindle organization GO:0007051 2 0.013
response to ketone GO:1901654 182 0.013
positive regulation of transcription dna templated GO:0045893 197 0.013
cellular macromolecule localization GO:0070727 122 0.013
dephosphorylation GO:0016311 98 0.013
phospholipid metabolic process GO:0006644 61 0.012
regulation of smooth muscle cell proliferation GO:0048660 75 0.012
negative regulation of catalytic activity GO:0043086 103 0.012
purine nucleotide metabolic process GO:0006163 229 0.012
regulation of cellular localization GO:0060341 263 0.012
response to biotic stimulus GO:0009607 226 0.012
cellular response to peptide GO:1901653 133 0.012
protein transport GO:0015031 132 0.012
purine ribonucleotide metabolic process GO:0009150 227 0.012
adult locomotory behavior GO:0008344 4 0.012
synaptic vesicle priming GO:0016082 4 0.012
response to hydrogen peroxide GO:0042542 89 0.012
male sex differentiation GO:0046661 64 0.012
small gtpase mediated signal transduction GO:0007264 36 0.012
regulation of canonical wnt signaling pathway GO:0060828 4 0.012
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.012
regulation of nucleotide metabolic process GO:0006140 117 0.012
oxidation reduction process GO:0055114 304 0.012
regulation of purine nucleotide metabolic process GO:1900542 115 0.012
hormone secretion GO:0046879 115 0.012
response to bacterium GO:0009617 200 0.012
organic anion transport GO:0015711 132 0.012
multi organism reproductive process GO:0044703 262 0.012
cell cycle checkpoint GO:0000075 2 0.012
organic substance catabolic process GO:1901575 316 0.012
single organism cellular localization GO:1902580 102 0.012
reactive nitrogen species metabolic process GO:2001057 1 0.012
neuron development GO:0048666 286 0.012
positive regulation of apoptotic process GO:0043065 154 0.012
nucleobase containing small molecule metabolic process GO:0055086 316 0.012
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.012
organic acid transport GO:0015849 116 0.011
positive regulation of catabolic process GO:0009896 78 0.011
multicellular organismal reproductive process GO:0048609 233 0.011
cell motility GO:0048870 202 0.011
cellular response to peptide hormone stimulus GO:0071375 120 0.011
prostaglandin transport GO:0015732 8 0.011
ras protein signal transduction GO:0007265 29 0.011
response to hypoxia GO:0001666 231 0.011
reproduction GO:0000003 245 0.011
positive regulation of nucleotide metabolic process GO:0045981 91 0.011
positive regulation of cellular component movement GO:0051272 102 0.011
prostaglandin secretion GO:0032310 6 0.011
cellular protein localization GO:0034613 122 0.011
dna integrity checkpoint GO:0031570 2 0.011
ncrna processing GO:0034470 3 0.011
synaptic transmission GO:0007268 235 0.011
regulation of cell differentiation GO:0045595 320 0.011
growth GO:0040007 165 0.011
male germ line stem cell asymmetric division GO:0048133 1 0.011
negative regulation of cell cycle phase transition GO:1901988 4 0.011
anion transport GO:0006820 178 0.011
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.011
neurotransmitter transport GO:0006836 42 0.011
reactive oxygen species biosynthetic process GO:1903409 8 0.011
cellular nitrogen compound catabolic process GO:0044270 163 0.011
regulation of response to wounding GO:1903034 69 0.011
glucan metabolic process GO:0044042 23 0.011
response to transition metal nanoparticle GO:1990267 122 0.011
establishment of protein localization GO:0045184 141 0.011
regulation of catabolic process GO:0009894 113 0.011
learning or memory GO:0007611 90 0.011
cell morphogenesis involved in differentiation GO:0000904 119 0.011
regulation of ion transport GO:0043269 245 0.010
positive regulation of cell communication GO:0010647 271 0.010
response to carbohydrate GO:0009743 183 0.010
calcium ion transport GO:0006816 131 0.010
cellular response to organic cyclic compound GO:0071407 202 0.010
positive regulation of cellular amine metabolic process GO:0033240 3 0.010
proteolysis GO:0006508 175 0.010
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.010
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.010
negative regulation of molecular function GO:0044092 133 0.010
organonitrogen compound biosynthetic process GO:1901566 167 0.010
response to fatty acid GO:0070542 65 0.010
response to vitamin GO:0033273 131 0.010

Pigm disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
nervous system disease DOID:863 0 0.049
disease of anatomical entity DOID:7 0 0.049
eye and adnexa disease DOID:1492 0 0.027
sensory system disease DOID:0050155 0 0.027
eye disease DOID:5614 0 0.027
disease of metabolism DOID:0014667 0 0.019
inherited metabolic disorder DOID:655 0 0.014
organ system cancer DOID:0050686 0 0.012
colorectal cancer DOID:9256 0 0.012
large intestine cancer DOID:5672 0 0.012
intestinal cancer DOID:10155 0 0.012
cancer DOID:162 0 0.012
colon carcinoma DOID:1520 0 0.012
gastrointestinal system cancer DOID:3119 0 0.012
disease of cellular proliferation DOID:14566 0 0.012
colon cancer DOID:219 0 0.012