Rattus norvegicus

0 known processes

RT1-S3

RT1 class Ib, locus S3

(Aliases: RTBM1,H2-T23,RT-BM1,RT1-BM1)

RT1-S3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of tolerance induction dependent upon immune response GO:0002652 1 0.754
Rat
t cell tolerance induction GO:0002517 3 0.703
Rat
positive regulation of tolerance induction GO:0002645 1 0.676
Rat
cellular response to iron ion starvation GO:0010106 1 0.597
Rat
immune response GO:0006955 104 0.412
Mouse Rat
regulation of adaptive immune response GO:0002819 8 0.382
Mouse Rat
regulation of tolerance induction to nonself antigen GO:0002655 1 0.364
Rat
jak stat cascade GO:0007259 26 0.356
negative regulation of natural killer cell mediated immunity GO:0002716 4 0.340
Rat
positive regulation of tolerance induction dependent upon immune response GO:0002654 1 0.332
Rat
regulation of satellite cell proliferation GO:0014842 1 0.320
response to virus GO:0009615 17 0.273
nucleobase containing small molecule metabolic process GO:0055086 316 0.247
response to cytokine GO:0034097 215 0.180
regulation of multicellular organismal development GO:2000026 376 0.176
Rat
positive regulation of leukocyte mediated cytotoxicity GO:0001912 7 0.172
Mouse Rat
antigen processing and presentation of endogenous antigen GO:0019883 1 0.144
Mouse
tyrosine phosphorylation of stat1 protein GO:0042508 3 0.144
positive regulation of growth factor dependent skeletal muscle satellite cell proliferation GO:1902728 1 0.141
skeletal muscle satellite cell proliferation GO:0014841 1 0.138
epithelial cell differentiation involved in kidney development GO:0035850 3 0.137
regulation of immune system process GO:0002682 123 0.136
Mouse Rat
antigen processing and presentation of peptide antigen via mhc class i GO:0002474 1 0.136
negative regulation of jak stat cascade GO:0046426 3 0.134
positive regulation of t cell mediated cytotoxicity GO:0001916 4 0.127
Mouse Rat
cellular response to peptide hormone stimulus GO:0071375 120 0.123
reproductive process GO:0022414 372 0.123
Rat
cellular response to cytokine stimulus GO:0071345 127 0.117
positive regulation of multicellular organismal process GO:0051240 387 0.117
Rat
negative regulation of multicellular organismal process GO:0051241 203 0.116
regulation of tolerance induction GO:0002643 2 0.112
Rat
cation homeostasis GO:0055080 195 0.099
Rat
regulation of mesenchymal cell proliferation GO:0010464 4 0.098
chemical homeostasis GO:0048878 292 0.097
Rat
nucleoside phosphate metabolic process GO:0006753 283 0.095
negative regulation of cell communication GO:0010648 158 0.094
regulation of rna metabolic process GO:0051252 391 0.091
positive regulation of response to stimulus GO:0048584 285 0.089
Mouse Rat
regulation of cell killing GO:0031341 12 0.089
Mouse Rat
antigen processing and presentation of endogenous peptide antigen via mhc class i GO:0019885 1 0.089
tolerance induction dependent upon immune response GO:0002461 2 0.087
Rat
liver development GO:0001889 90 0.086
Rat
immune effector process GO:0002252 53 0.085
Mouse Rat
positive regulation of tolerance induction to nonself antigen GO:0002657 1 0.085
Rat
regulation of erythrocyte aggregation GO:0034118 1 0.083
purine containing compound biosynthetic process GO:0072522 85 0.083
positive regulation of immune system process GO:0002684 90 0.080
Mouse Rat
negative regulation of innate immune response GO:0045824 4 0.080
Rat
rna metabolic process GO:0016070 406 0.079
acute phase response GO:0006953 20 0.072
Rat
negative regulation of metanephros development GO:0072217 2 0.072
positive regulation of cellular biosynthetic process GO:0031328 295 0.070
response to estrogen GO:0043627 232 0.067
cellular response to endogenous stimulus GO:0071495 377 0.066
amine metabolic process GO:0009308 38 0.065
female pregnancy GO:0007565 122 0.061
Rat
metal ion homeostasis GO:0055065 186 0.060
Rat
negative regulation of kidney development GO:0090185 2 0.059
nucleotide metabolic process GO:0009117 279 0.058
response to other organism GO:0051707 220 0.058
metanephric nephron tubule epithelial cell differentiation GO:0072257 1 0.056
response to nutrient levels GO:0031667 370 0.055
Rat
carboxylic acid metabolic process GO:0019752 289 0.054
mesenchymal cell differentiation involved in renal system development GO:2001012 1 0.054
response to heat GO:0009408 60 0.053
ribonucleotide metabolic process GO:0009259 231 0.053
tolerance induction GO:0002507 5 0.052
Rat
cellular response to oxygen containing compound GO:1901701 386 0.051
regulation of cell proliferation GO:0042127 359 0.051
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.051
response to peptide hormone GO:0043434 278 0.051
adaptive immune response GO:0002250 14 0.051
Mouse Rat
regulation of intracellular signal transduction GO:1902531 218 0.051
positive regulation of leukocyte mediated immunity GO:0002705 13 0.050
Mouse Rat
nucleoside metabolic process GO:0009116 179 0.049
cellular response to organic cyclic compound GO:0071407 202 0.049
homeostatic process GO:0042592 331 0.049
Rat
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.048
regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002822 8 0.048
Mouse Rat
nucleotide biosynthetic process GO:0009165 98 0.048
regulation of phosphate metabolic process GO:0019220 349 0.047
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis GO:0003340 2 0.047
regulation of nervous system development GO:0051960 264 0.046
cellular ketone metabolic process GO:0042180 51 0.046
cell morphogenesis involved in differentiation GO:0000904 119 0.044
negative regulation of phosphate metabolic process GO:0045936 80 0.044
response to estradiol GO:0032355 164 0.044
negative regulation of phosphorus metabolic process GO:0010563 80 0.043
cellular response to interleukin 1 GO:0071347 37 0.043
response to interleukin 1 GO:0070555 55 0.043
regulation of signal transduction GO:0009966 318 0.043
positive regulation of atp biosynthetic process GO:2001171 2 0.042
negative regulation of response to stimulus GO:0048585 155 0.042
Rat
nephron tubule epithelial cell differentiation GO:0072160 1 0.042
g protein coupled receptor signaling pathway GO:0007186 242 0.042
regulation of phosphorus metabolic process GO:0051174 349 0.042
negative regulation of tyrosine phosphorylation of stat1 protein GO:0042512 1 0.041
regulation of neurogenesis GO:0050767 247 0.041
intracellular signal transduction GO:0035556 314 0.040
positive regulation of nucleotide biosynthetic process GO:0030810 36 0.040
negative regulation of cell killing GO:0031342 5 0.040
Rat
response to retinoic acid GO:0032526 63 0.039
regulation of nucleic acid templated transcription GO:1903506 380 0.038
cellular response to hormone stimulus GO:0032870 247 0.038
protein complex biogenesis GO:0070271 263 0.037
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.037
positive regulation of cell proliferation GO:0008284 249 0.037
purine nucleotide biosynthetic process GO:0006164 83 0.037
aging GO:0007568 241 0.036
regulation of metanephros development GO:0072215 4 0.036
purine containing compound metabolic process GO:0072521 253 0.036
tolerance induction to nonself antigen GO:0002462 2 0.036
Rat
carbohydrate derivative metabolic process GO:1901135 346 0.035
positive regulation of gene expression GO:0010628 244 0.035
immune system process GO:0002376 204 0.035
Mouse Rat
response to starvation GO:0042594 59 0.035
Rat
regulation of nucleotide biosynthetic process GO:0030808 47 0.035
cellular response to retinoic acid GO:0071300 27 0.034
cellular response to organonitrogen compound GO:0071417 197 0.034
regulation of innate immune response GO:0045088 15 0.034
Rat
glycosyl compound metabolic process GO:1901657 182 0.034
regulation of cellular amine metabolic process GO:0033238 8 0.033
cellular response to peptide GO:1901653 133 0.033
positive regulation of nervous system development GO:0051962 178 0.033
regulation of leukocyte mediated immunity GO:0002703 19 0.033
Mouse Rat
regulation of skeletal muscle cell proliferation GO:0014857 2 0.033
response to inorganic substance GO:0010035 377 0.032
purine ribonucleotide metabolic process GO:0009150 227 0.032
programmed cell death GO:0012501 392 0.032
purine nucleotide metabolic process GO:0006163 229 0.032
negative regulation of metabolic process GO:0009892 331 0.032
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.032
cellular response to nutrient levels GO:0031669 60 0.031
Rat
response to glucose GO:0009749 136 0.031
regulation of cell development GO:0060284 263 0.031
response to biotic stimulus GO:0009607 226 0.031
regulation of defense response GO:0031347 68 0.031
Rat
negative regulation of signaling GO:0023057 157 0.030
regulation of natural killer cell mediated cytotoxicity GO:0042269 6 0.030
Rat
negative regulation of hydrogen peroxide biosynthetic process GO:0010730 2 0.030
cellular response to extracellular stimulus GO:0031668 73 0.030
Rat
cellular component biogenesis GO:0044085 368 0.030
positive regulation of erythrocyte aggregation GO:0034120 1 0.030
innate immune response GO:0045087 35 0.030
Rat
toxin transport GO:1901998 3 0.030
regulation of body fluid levels GO:0050878 90 0.029
membrane hyperpolarization GO:0060081 11 0.029
spindle organization GO:0007051 2 0.029
transcription from rna polymerase ii promoter GO:0006366 252 0.029
negative regulation of protein phosphorylation GO:0001933 44 0.029
response to tumor necrosis factor GO:0034612 56 0.029
mitotic spindle organization GO:0007052 2 0.029
transcription dna templated GO:0006351 377 0.029
complement activation GO:0006956 11 0.028
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.028
negative regulation of hydrogen peroxide metabolic process GO:0010727 2 0.028
neuron projection development GO:0031175 273 0.028
regulation of rna biosynthetic process GO:2001141 381 0.028
regulation of purine nucleotide metabolic process GO:1900542 115 0.028
reactive oxygen species biosynthetic process GO:1903409 8 0.028
ribonucleoside triphosphate metabolic process GO:0009199 141 0.028
positive regulation of skeletal muscle cell proliferation GO:0014858 2 0.028
metanephric renal vesicle morphogenesis GO:0072283 3 0.027
camp metabolic process GO:0046058 63 0.027
cellular amino acid metabolic process GO:0006520 107 0.027
cellular response to nitrogen compound GO:1901699 210 0.027
purine nucleoside metabolic process GO:0042278 169 0.026
positive regulation of mesenchymal cell proliferation GO:0002053 4 0.026
positive regulation of homotypic cell cell adhesion GO:0034112 2 0.026
olfactory learning GO:0008355 1 0.026
rna biosynthetic process GO:0032774 380 0.026
regulation of cell projection organization GO:0031344 175 0.026
glial cell apoptotic process GO:0034349 8 0.026
negative regulation of signal transduction GO:0009968 83 0.025
cellular homeostasis GO:0019725 252 0.025
response to dsrna GO:0043331 9 0.025
testosterone biosynthetic process GO:0061370 5 0.025
glucose homeostasis GO:0042593 75 0.025
negative regulation of metanephric nephron tubule epithelial cell differentiation GO:0072308 1 0.025
response to external biotic stimulus GO:0043207 221 0.025
regulation of epithelial cell differentiation GO:0030856 12 0.025
cellular response to stress GO:0033554 269 0.025
Rat
erythrocyte aggregation GO:0034117 1 0.025
regulation of lymphocyte mediated immunity GO:0002706 11 0.024
Mouse Rat
regulation of cell morphogenesis involved in differentiation GO:0010769 72 0.024
viral genome replication GO:0019079 2 0.024
metanephric mesenchymal cell differentiation GO:0072162 1 0.024
mammary gland involution GO:0060056 5 0.024
negative regulation of nephron tubule epithelial cell differentiation GO:0072183 1 0.023
nucleoside phosphate biosynthetic process GO:1901293 102 0.023
negative regulation of cellular protein metabolic process GO:0032269 106 0.023
regulation of reactive oxygen species metabolic process GO:2000377 26 0.023
purine ribonucleoside biosynthetic process GO:0046129 21 0.023
regulation of cellular ketone metabolic process GO:0010565 27 0.023
multicellular organism reproduction GO:0032504 233 0.023
oxoacid metabolic process GO:0043436 290 0.022
negative regulation of immune effector process GO:0002698 12 0.022
Rat
memory GO:0007613 54 0.022
response to peptide GO:1901652 292 0.022
leukocyte mediated cytotoxicity GO:0001909 10 0.022
Mouse Rat
regulation of neuron projection development GO:0010975 161 0.022
regulation of transcription dna templated GO:0006355 374 0.022
ribose phosphate metabolic process GO:0019693 235 0.021
cellular chemical homeostasis GO:0055082 247 0.021
negative regulation of leukocyte mediated immunity GO:0002704 6 0.021
Rat
catabolic process GO:0009056 351 0.021
negative regulation of viral genome replication GO:0045071 1 0.021
negative regulation of protein metabolic process GO:0051248 114 0.021
organophosphate metabolic process GO:0019637 370 0.021
ion homeostasis GO:0050801 212 0.021
Rat
regulation of cellular component organization GO:0051128 368 0.020
multicellular organismal reproductive process GO:0048609 233 0.020
positive regulation of phosphorus metabolic process GO:0010562 262 0.020
multi multicellular organism process GO:0044706 138 0.020
Rat
single organism organelle organization GO:1902589 180 0.020
regulation of cell differentiation GO:0045595 320 0.020
t cell mediated cytotoxicity GO:0001913 5 0.020
Mouse Rat
single organism biosynthetic process GO:0044711 342 0.020
organic substance catabolic process GO:1901575 316 0.020
regulation of smooth muscle cell proliferation GO:0048660 75 0.020
negative regulation of cellular metabolic process GO:0031324 281 0.019
blood circulation GO:0008015 183 0.019
response to extracellular stimulus GO:0009991 380 0.019
Rat
carbohydrate derivative biosynthetic process GO:1901137 124 0.019
negative regulation of cell death GO:0060548 229 0.019
response to monosaccharide GO:0034284 159 0.019
cellular response to acid chemical GO:0071229 75 0.019
cell projection organization GO:0030030 302 0.019
nucleoside monophosphate metabolic process GO:0009123 93 0.019
developmental process involved in reproduction GO:0003006 159 0.019
response to hexose GO:0009746 144 0.019
regulation of homotypic cell cell adhesion GO:0034110 4 0.019
brain development GO:0007420 247 0.018
positive regulation of satellite cell proliferation GO:1902724 1 0.018
positive regulation of cell development GO:0010720 176 0.018
neuron death GO:0070997 127 0.018
negative regulation of developmental process GO:0051093 125 0.018
protein localization GO:0008104 191 0.018
neuron differentiation GO:0030182 368 0.017
regulation of immune effector process GO:0002697 32 0.017
Mouse Rat
metal ion transport GO:0030001 289 0.017
multi organism reproductive process GO:0044703 262 0.017
Rat
positive regulation of developmental process GO:0051094 283 0.017
Rat
positive regulation of nucleic acid templated transcription GO:1903508 197 0.017
positive regulation of signaling GO:0023056 270 0.017
regulation of hydrogen peroxide biosynthetic process GO:0010728 2 0.017
mesenchymal cell differentiation involved in kidney development GO:0072161 1 0.017
organic cyclic compound catabolic process GO:1901361 175 0.017
regulation of t cell migration GO:2000404 1 0.017
positive regulation of biosynthetic process GO:0009891 319 0.017
positive regulation of nucleotide metabolic process GO:0045981 91 0.017
negative regulation of cellular amino acid metabolic process GO:0045763 0 0.017
regulation of cellular amino acid metabolic process GO:0006521 2 0.016
positive regulation of immune response GO:0050778 42 0.016
Mouse Rat
purine ribonucleoside metabolic process GO:0046128 168 0.016
regulation of cellular protein metabolic process GO:0032268 267 0.016
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.016
cell killing GO:0001906 13 0.016
Mouse Rat
positive regulation of neuron projection development GO:0010976 99 0.016
positive regulation of rna metabolic process GO:0051254 203 0.016
negative regulation of macromolecule metabolic process GO:0010605 260 0.016
regulation of protein phosphorylation GO:0001932 183 0.016
response to radiation GO:0009314 137 0.016
cellular response to lipid GO:0071396 201 0.016
regulation of neuron death GO:1901214 115 0.016
organonitrogen compound biosynthetic process GO:1901566 167 0.015
regulation of natural killer cell mediated immunity GO:0002715 6 0.015
Rat
nucleic acid templated transcription GO:0097659 379 0.015
second messenger mediated signaling GO:0019932 51 0.015
organonitrogen compound catabolic process GO:1901565 179 0.015
regulation of hormone levels GO:0010817 187 0.015
secretion GO:0046903 307 0.015
protein oligomerization GO:0051259 191 0.015
negative regulation of immune system process GO:0002683 39 0.015
Rat
regulation of cyclic nucleotide metabolic process GO:0030799 51 0.015
peptidyl amino acid modification GO:0018193 126 0.015
response to temperature stimulus GO:0009266 94 0.015
transmembrane transport GO:0055085 412 0.015
negative regulation of cellular amine metabolic process GO:0033239 3 0.015
negative regulation of epithelial cell differentiation GO:0030857 5 0.015
organ regeneration GO:0031100 101 0.015
Rat
positive regulation of cell projection organization GO:0031346 111 0.014
mesenchymal cell proliferation GO:0010463 4 0.014
positive regulation of cell killing GO:0031343 9 0.014
Mouse Rat
mitochondrion organization GO:0007005 35 0.014
cellular response to hexose stimulus GO:0071331 65 0.014
positive regulation of leukocyte proliferation GO:0070665 20 0.014
negative regulation of neuron death GO:1901215 69 0.014
cellular response to external stimulus GO:0071496 118 0.014
Rat
metanephric mesenchymal cell proliferation involved in metanephros development GO:0072136 1 0.014
organophosphate biosynthetic process GO:0090407 143 0.014
regulation of metanephric nephron tubule epithelial cell differentiation GO:0072307 1 0.014
negative regulation of phosphorylation GO:0042326 57 0.014
tissue development GO:0009888 252 0.014
regulation of nucleotide metabolic process GO:0006140 117 0.014
macromolecular complex assembly GO:0065003 273 0.014
head development GO:0060322 247 0.014
positive regulation of phosphate metabolic process GO:0045937 262 0.014
immune system development GO:0002520 41 0.014
Rat
negative regulation of protein modification process GO:0031400 52 0.014
negative regulation of viral process GO:0048525 4 0.014
response to metal ion GO:0010038 253 0.013
sequestering of calcium ion GO:0051208 8 0.013
ribose phosphate biosynthetic process GO:0046390 87 0.013
cell part morphogenesis GO:0032990 123 0.013
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.013
response to mechanical stimulus GO:0009612 134 0.013
sex differentiation GO:0007548 113 0.013
purine nucleoside monophosphate metabolic process GO:0009126 84 0.013
cellular response to tumor necrosis factor GO:0071356 46 0.013
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.013
response to axon injury GO:0048678 59 0.012
response to purine containing compound GO:0014074 126 0.012
positive regulation of neuron differentiation GO:0045666 126 0.012
reproduction GO:0000003 245 0.012
kidney mesenchymal cell proliferation GO:0072135 1 0.012
metanephric epithelium development GO:0072207 4 0.012
positive regulation of interleukin 1 alpha production GO:0032730 1 0.012
regulation of protein modification process GO:0031399 194 0.012
positive regulation of cellular amine metabolic process GO:0033240 3 0.012
defense response to virus GO:0051607 9 0.012
neuron development GO:0048666 286 0.011
regulation of viral genome replication GO:0045069 2 0.011
cellular response to dsrna GO:0071359 8 0.011
behavior GO:0007610 205 0.011
single organism carbohydrate metabolic process GO:0044723 118 0.011
body fluid secretion GO:0007589 41 0.011
positive regulation of transcription dna templated GO:0045893 197 0.011
response to cobalt ion GO:0032025 12 0.011
carbohydrate homeostasis GO:0033500 75 0.011
regulation of reactive oxygen species biosynthetic process GO:1903426 5 0.011
amide transport GO:0042886 105 0.011
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.011
response to growth hormone GO:0060416 21 0.011
negative regulation of blood vessel morphogenesis GO:2000181 10 0.011
regulation of leukocyte mediated cytotoxicity GO:0001910 10 0.011
Mouse Rat
olfactory behavior GO:0042048 2 0.011
purine ribonucleotide biosynthetic process GO:0009152 81 0.011
positive regulation of blood coagulation GO:0030194 4 0.011
positive regulation of neurogenesis GO:0050769 165 0.011
peptide transport GO:0015833 97 0.011
nucleobase containing compound catabolic process GO:0034655 152 0.011
positive regulation of nucleoside metabolic process GO:0045979 55 0.010
response to acid chemical GO:0001101 222 0.010
regulation of cell morphogenesis GO:0022604 77 0.010
ribonucleotide biosynthetic process GO:0009260 85 0.010
gonad development GO:0008406 104 0.010
protein transport GO:0015031 132 0.010
positive regulation of smooth muscle cell migration GO:0014911 27 0.010
regulation of phosphorylation GO:0042325 248 0.010
learning or memory GO:0007611 90 0.010
response to wounding GO:0009611 254 0.010
anatomical structure formation involved in morphogenesis GO:0048646 83 0.010

RT1-S3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of metabolism DOID:0014667 0 0.058
primary immunodeficiency disease DOID:612 0 0.045
severe combined immunodeficiency DOID:627 0 0.045
combined t cell and b cell immunodeficiency DOID:628 0 0.045
immune system disease DOID:2914 0 0.045
disease of anatomical entity DOID:7 0 0.045
acquired metabolic disease DOID:0060158 0 0.012
cancer DOID:162 0 0.012
disease of cellular proliferation DOID:14566 0 0.012
organ system cancer DOID:0050686 0 0.012