Rattus norvegicus

51 known processes

Rims3

regulating synaptic membrane exocytosis 3

(Aliases: Nim2,Nim3)

Rims3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
transmembrane transport GO:0055085 412 0.346
aging GO:0007568 241 0.154
ion transmembrane transport GO:0034220 365 0.104
cation transport GO:0006812 382 0.092
response to external biotic stimulus GO:0043207 221 0.088
response to inorganic substance GO:0010035 377 0.083
Rat
secretion GO:0046903 307 0.082
organic acid metabolic process GO:0006082 292 0.080
oxoacid metabolic process GO:0043436 290 0.079
cation transmembrane transport GO:0098655 263 0.073
response to other organism GO:0051707 220 0.071
response to biotic stimulus GO:0009607 226 0.070
regulation of hormone levels GO:0010817 187 0.069
Rat
multi organism reproductive process GO:0044703 262 0.067
cellular response to oxygen containing compound GO:1901701 386 0.063
blood circulation GO:0008015 183 0.058
cellular component assembly GO:0022607 360 0.056
organic hydroxy compound metabolic process GO:1901615 115 0.055
regulation of calcium ion transport GO:0051924 77 0.055
g protein coupled receptor signaling pathway GO:0007186 242 0.052
calcium ion homeostasis GO:0055074 162 0.051
cellular response to endogenous stimulus GO:0071495 377 0.050
response to hypoxia GO:0001666 231 0.050
cellular chemical homeostasis GO:0055082 247 0.048
macromolecular complex assembly GO:0065003 273 0.048
hormone transport GO:0009914 121 0.046
Rat
positive regulation of secretion GO:0051047 140 0.044
Rat
cellular cation homeostasis GO:0030003 180 0.044
protein complex subunit organization GO:0071822 302 0.044
circulatory system process GO:0003013 183 0.043
intracellular signal transduction GO:0035556 314 0.042
positive regulation of cellular component organization GO:0051130 200 0.041
Rat
regulation of phosphorus metabolic process GO:0051174 349 0.040
Yeast
smooth muscle cell proliferation GO:0048659 77 0.039
glutathione transport GO:0034635 2 0.039
ion homeostasis GO:0050801 212 0.038
cellular response to growth factor stimulus GO:0071363 162 0.038
positive regulation of nervous system development GO:0051962 178 0.037
secretion by cell GO:0032940 248 0.037
protein complex assembly GO:0006461 263 0.036
regulation of ion transport GO:0043269 245 0.035
carboxylic acid metabolic process GO:0019752 289 0.033
chemical homeostasis GO:0048878 292 0.033
response to oxygen levels GO:0070482 265 0.033
organonitrogen compound biosynthetic process GO:1901566 167 0.033
organophosphate metabolic process GO:0019637 370 0.032
Yeast
regulation of hormone secretion GO:0046883 106 0.032
Rat
detection of visible light GO:0009584 3 0.031
metal ion transport GO:0030001 289 0.030
reproductive process GO:0022414 372 0.030
monovalent inorganic cation transport GO:0015672 172 0.030
neuron development GO:0048666 286 0.029
regulation of nervous system development GO:0051960 264 0.029
cytosolic calcium ion homeostasis GO:0051480 140 0.029
regulation of signal transduction GO:0009966 318 0.028
cation homeostasis GO:0055080 195 0.028
cellular ketone metabolic process GO:0042180 51 0.028
response to bacterium GO:0009617 200 0.028
muscle cell proliferation GO:0033002 84 0.028
negative regulation of chronic inflammatory response GO:0002677 2 0.028
oligopeptide transport GO:0006857 4 0.028
positive regulation of neuron projection development GO:0010976 99 0.027
reproduction GO:0000003 245 0.027
positive regulation of multicellular organismal process GO:0051240 387 0.027
cellular response to abiotic stimulus GO:0071214 85 0.027
regulation of secretion by cell GO:1903530 208 0.026
response to carbohydrate GO:0009743 183 0.026
calcium ion transport GO:0006816 131 0.026
inorganic cation transmembrane transport GO:0098662 202 0.026
synaptic transmission GO:0007268 235 0.026
divalent metal ion transport GO:0070838 132 0.025
response to growth factor GO:0070848 189 0.025
epinephrine transport GO:0048241 7 0.025
response to decreased oxygen levels GO:0036293 237 0.025
carboxylic acid transport GO:0046942 115 0.024
response to wounding GO:0009611 254 0.024
neurological system process GO:0050877 219 0.023
response to monosaccharide GO:0034284 159 0.023
protein complex biogenesis GO:0070271 263 0.023
multicellular organismal reproductive process GO:0048609 233 0.023
inorganic ion transmembrane transport GO:0098660 229 0.023
response to glucose GO:0009749 136 0.023
organic acid transport GO:0015849 116 0.023
regulation of cellular component organization GO:0051128 368 0.023
Rat
response to ionizing radiation GO:0010212 59 0.022
response to transforming growth factor beta GO:0071559 46 0.022
negative regulation of catalytic activity GO:0043086 103 0.021
regulation of phosphate metabolic process GO:0019220 349 0.021
Yeast
positive regulation of neuron differentiation GO:0045666 126 0.021
monocarboxylic acid transport GO:0015718 52 0.020
cellular response to external stimulus GO:0071496 118 0.020
regulation of cellular amine metabolic process GO:0033238 8 0.020
regulation of excretion GO:0044062 21 0.020
nucleoside phosphate metabolic process GO:0006753 283 0.020
anion transport GO:0006820 178 0.019
tissue development GO:0009888 252 0.019
peristalsis GO:0030432 2 0.019
naphthalene containing compound metabolic process GO:0090420 2 0.019
single organism reproductive process GO:0044702 297 0.019
regulation of anatomical structure size GO:0090066 135 0.019
divalent inorganic cation transport GO:0072511 134 0.019
regulation of cellular localization GO:0060341 263 0.019
single organism biosynthetic process GO:0044711 342 0.018
glutamate receptor signaling pathway GO:0007215 43 0.018
response to hydrogen peroxide GO:0042542 89 0.018
response to hexose GO:0009746 144 0.018
growth GO:0040007 165 0.018
regulation of molecular function GO:0065009 398 0.018
cellular response to stress GO:0033554 269 0.018
response to alkaloid GO:0043279 132 0.018
regulation of secretion GO:0051046 224 0.018
monocarboxylic acid metabolic process GO:0032787 152 0.018
homeostatic process GO:0042592 331 0.018
regulation of protein metabolic process GO:0051246 289 0.018
cellular homeostasis GO:0019725 252 0.017
cellular amine metabolic process GO:0044106 38 0.017
nitrogen compound transport GO:0071705 229 0.017
Rat
response to acid chemical GO:0001101 222 0.017
response to radiation GO:0009314 137 0.017
amine metabolic process GO:0009308 38 0.017
adenylate cyclase inhibiting opioid receptor signaling pathway GO:0031635 2 0.017
multicellular organism reproduction GO:0032504 233 0.017
negative regulation of transport GO:0051051 136 0.017
Rat
cellular divalent inorganic cation homeostasis GO:0072503 162 0.017
myeloid leukocyte activation GO:0002274 36 0.017
proteolysis GO:0006508 175 0.017
negative regulation of molecular function GO:0044092 133 0.016
positive regulation of response to stimulus GO:0048584 285 0.016
regulation of cellular ketone metabolic process GO:0010565 27 0.016
potassium ion transmembrane transport GO:0071805 71 0.016
positive regulation of protein metabolic process GO:0051247 178 0.016
transmission of nerve impulse GO:0019226 42 0.016
membrane organization GO:0061024 94 0.016
Yeast Rat
programmed cell death GO:0012501 392 0.016
head development GO:0060322 247 0.016
response to oxidative stress GO:0006979 186 0.015
response to mechanical stimulus GO:0009612 134 0.015
cellular modified amino acid metabolic process GO:0006575 61 0.015
cell projection organization GO:0030030 302 0.015
cellular component biogenesis GO:0044085 368 0.015
peptide transport GO:0015833 97 0.015
Rat
regulation of cell development GO:0060284 263 0.015
cellular calcium ion homeostasis GO:0006874 160 0.015
somatostatin receptor signaling pathway GO:0038169 4 0.015
nucleobase containing small molecule metabolic process GO:0055086 316 0.015
sensory perception GO:0007600 101 0.015
lipid metabolic process GO:0006629 283 0.015
Yeast
cellular response to camp GO:0071320 26 0.015
positive regulation of cell development GO:0010720 176 0.015
organic anion transport GO:0015711 132 0.014
positive regulation of cellular component movement GO:0051272 102 0.014
vascular process in circulatory system GO:0003018 96 0.014
cellular metal ion homeostasis GO:0006875 172 0.014
positive regulation of signaling GO:0023056 270 0.014
signal transduction by phosphorylation GO:0023014 144 0.014
regulation of peptide hormone secretion GO:0090276 80 0.014
Rat
response to estrogen GO:0043627 232 0.014
ribose phosphate metabolic process GO:0019693 235 0.014
regulation of metal ion transport GO:0010959 118 0.014
pyridine containing compound metabolic process GO:0072524 32 0.013
organelle organization GO:0006996 266 0.013
Yeast Rat
negative regulation of cell communication GO:0010648 158 0.013
protein phosphorylation GO:0006468 345 0.013
response to molecule of fungal origin GO:0002238 3 0.013
carbohydrate derivative metabolic process GO:1901135 346 0.013
positive regulation of mapk cascade GO:0043410 92 0.013
neuron differentiation GO:0030182 368 0.013
protein tetramerization GO:0051262 38 0.013
response to lipopolysaccharide GO:0032496 191 0.013
cell cell signaling GO:0007267 335 0.013
tripeptide transport GO:0042939 2 0.013
muscle system process GO:0003012 115 0.013
positive regulation of cell projection organization GO:0031346 111 0.012
amino acid transport GO:0006865 70 0.012
macromolecular complex subunit organization GO:0043933 339 0.012
cellular amino acid metabolic process GO:0006520 107 0.012
hair cell differentiation GO:0035315 2 0.012
actin filament bundle organization GO:0061572 19 0.012
protein oligomerization GO:0051259 191 0.012
organic hydroxy compound biosynthetic process GO:1901617 51 0.012
somatostatin signaling pathway GO:0038170 4 0.012
sensory perception of light stimulus GO:0050953 3 0.012
negative regulation of multicellular organismal process GO:0051241 203 0.012
defense response GO:0006952 194 0.012
regulation of system process GO:0044057 208 0.012
positive regulation of cell communication GO:0010647 271 0.012
divalent inorganic cation homeostasis GO:0072507 165 0.012
regulation of cellular amino acid metabolic process GO:0006521 2 0.012
regulation of growth GO:0040008 105 0.012
cellular ion homeostasis GO:0006873 184 0.012
muscle structure development GO:0061061 87 0.012
organophosphate biosynthetic process GO:0090407 143 0.011
cell substrate adhesion GO:0031589 29 0.011
positive regulation of developmental process GO:0051094 283 0.011
t cell migration GO:0072678 2 0.011
axonogenesis GO:0007409 71 0.011
regulation of neuron differentiation GO:0045664 208 0.011
positive regulation of protein kinase activity GO:0045860 73 0.011
eye development GO:0001654 50 0.011
negative regulation of metabolic process GO:0009892 331 0.011
regulation of cellular protein metabolic process GO:0032268 267 0.011
positive regulation of cellular amine metabolic process GO:0033240 3 0.011
regulation of rna biosynthetic process GO:2001141 381 0.011
regulation of cell differentiation GO:0045595 320 0.011
trichloroethylene metabolic process GO:0018979 1 0.011
regulation of cell morphogenesis GO:0022604 77 0.011
developmental process involved in reproduction GO:0003006 159 0.011
phasic smooth muscle contraction GO:0014821 3 0.011
response to cytokine GO:0034097 215 0.011
regulation of nucleic acid templated transcription GO:1903506 380 0.011
metal ion homeostasis GO:0055065 186 0.011
response to camp GO:0051591 91 0.011
negative regulation of programmed cell death GO:0043069 183 0.011
central nervous system development GO:0007417 311 0.010
muscle contraction GO:0006936 88 0.010
nucleotide metabolic process GO:0009117 279 0.010
regulation of cell proliferation GO:0042127 359 0.010
cell motility GO:0048870 202 0.010
positive regulation of cellular protein metabolic process GO:0032270 167 0.010
positive regulation of molecular function GO:0044093 230 0.010

Rims3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org