Rattus norvegicus

55 known processes

Safb

scaffold attachment factor B

Safb biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
rna metabolic process GO:0016070 406 0.282
rna biosynthetic process GO:0032774 380 0.189
regulation of nucleic acid templated transcription GO:1903506 380 0.183
negative regulation of metabolic process GO:0009892 331 0.151
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.147
regulation of rna metabolic process GO:0051252 391 0.139
protein autophosphorylation GO:0046777 66 0.113
positive regulation of rna metabolic process GO:0051254 203 0.113
nucleic acid templated transcription GO:0097659 379 0.112
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.110
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.093
negative regulation of cellular biosynthetic process GO:0031327 161 0.086
response to nutrient GO:0007584 248 0.076
negative regulation of rna biosynthetic process GO:1902679 118 0.075
regulation of protein modification process GO:0031399 194 0.066
protein dna complex disassembly GO:0032986 1 0.063
cellular amino acid metabolic process GO:0006520 107 0.063
response to extracellular stimulus GO:0009991 380 0.062
regulation of gene expression epigenetic GO:0040029 10 0.058
dna methylation or demethylation GO:0044728 8 0.058
localization of cell GO:0051674 202 0.057
apoptotic process GO:0006915 381 0.057
cellular component movement GO:0006928 248 0.056
cellular response to nitrogen compound GO:1901699 210 0.056
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.056
histone h3 k9 methylation GO:0051567 1 0.056
organelle organization GO:0006996 266 0.055
response to nutrient levels GO:0031667 370 0.054
negative regulation of transcription dna templated GO:0045892 116 0.052
reproductive process GO:0022414 372 0.051
regulation of rna biosynthetic process GO:2001141 381 0.050
locomotion GO:0040011 237 0.048
regulation of cell proliferation GO:0042127 359 0.048
transcription dna templated GO:0006351 377 0.048
negative regulation of cellular metabolic process GO:0031324 281 0.047
macromolecular complex subunit organization GO:0043933 339 0.045
oxoacid metabolic process GO:0043436 290 0.044
heart morphogenesis GO:0003007 3 0.044
cellular response to organonitrogen compound GO:0071417 197 0.042
transcription from rna polymerase ii promoter GO:0006366 252 0.042
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.042
chromatin assembly or disassembly GO:0006333 1 0.042
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.041
organic acid metabolic process GO:0006082 292 0.039
carboxylic acid metabolic process GO:0019752 289 0.039
regulation of growth GO:0040008 105 0.039
regulation of histone h3 k9 methylation GO:0051570 1 0.038
negative regulation of gene expression GO:0010629 199 0.038
negative regulation of biosynthetic process GO:0009890 168 0.037
negative regulation of macromolecule metabolic process GO:0010605 260 0.037
regulation of protein metabolic process GO:0051246 289 0.036
cellular response to endogenous stimulus GO:0071495 377 0.035
positive regulation of gene expression GO:0010628 244 0.034
positive regulation of biosynthetic process GO:0009891 319 0.034
peptidyl amino acid modification GO:0018193 126 0.034
amine metabolic process GO:0009308 38 0.034
chromatin disassembly GO:0031498 1 0.033
double strand break repair GO:0006302 1 0.033
cellular response to oxygen containing compound GO:1901701 386 0.033
cellular ketone metabolic process GO:0042180 51 0.033
regulation of cellular protein metabolic process GO:0032268 267 0.033
regulation of transcription dna templated GO:0006355 374 0.032
response to inorganic substance GO:0010035 377 0.032
single organism organelle organization GO:1902589 180 0.031
positive regulation of nucleic acid templated transcription GO:1903508 197 0.031
response to estradiol GO:0032355 164 0.030
viral transcription GO:0019083 2 0.030
cellular amine metabolic process GO:0044106 38 0.030
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.030
cation transport GO:0006812 382 0.030
cell migration GO:0016477 197 0.030
transmembrane transport GO:0055085 412 0.029
regulation of signal transduction GO:0009966 318 0.029
viral gene expression GO:0019080 2 0.029
regulation of cellular amine metabolic process GO:0033238 8 0.029
single organism reproductive process GO:0044702 297 0.029
positive regulation of transcription dna templated GO:0045893 197 0.029
negative regulation of rna metabolic process GO:0051253 123 0.028
response to peptide GO:1901652 292 0.028
cellular response to peptide GO:1901653 133 0.028
regulation of cellular ketone metabolic process GO:0010565 27 0.028
response to peptide hormone GO:0043434 278 0.028
positive regulation of molecular function GO:0044093 230 0.027
cellular response to stress GO:0033554 269 0.027
divalent metal ion transport GO:0070838 132 0.027
regulation of apoptotic process GO:0042981 335 0.027
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.027
multicellular organism reproduction GO:0032504 233 0.027
chromatin organization GO:0006325 34 0.026
nucleobase containing small molecule metabolic process GO:0055086 316 0.026
chemical homeostasis GO:0048878 292 0.025
stem cell maintenance GO:0019827 6 0.025
regulation of cellular amino acid metabolic process GO:0006521 2 0.025
liver development GO:0001889 90 0.025
synaptic growth at neuromuscular junction GO:0051124 1 0.025
regulation of phosphorylation GO:0042325 248 0.024
head development GO:0060322 247 0.024
negative regulation of nucleic acid templated transcription GO:1903507 117 0.023
positive regulation of signaling GO:0023056 270 0.023
histone h3 acetylation GO:0043966 2 0.023
dna metabolic process GO:0006259 96 0.023
positive regulation of phosphorylation GO:0042327 177 0.023
regulation of organelle organization GO:0033043 80 0.022
dna modification GO:0006304 12 0.022
reproduction GO:0000003 245 0.022
positive regulation of protein modification process GO:0031401 142 0.022
response to alkaloid GO:0043279 132 0.022
rhythmic process GO:0048511 156 0.022
positive regulation of rna biosynthetic process GO:1902680 197 0.022
carbohydrate metabolic process GO:0005975 130 0.022
response to ethanol GO:0045471 162 0.022
cellular catabolic process GO:0044248 295 0.022
regulation of phosphate metabolic process GO:0019220 349 0.022
central nervous system development GO:0007417 311 0.021
cardiovascular system development GO:0072358 134 0.021
positive regulation of multicellular organismal process GO:0051240 387 0.021
multicellular organismal reproductive process GO:0048609 233 0.021
histone modification GO:0016570 30 0.021
metal ion transport GO:0030001 289 0.021
regulation of catalytic activity GO:0050790 304 0.021
positive regulation of cellular biosynthetic process GO:0031328 295 0.021
negative regulation of cell proliferation GO:0008285 119 0.020
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.020
cellular response to lipid GO:0071396 201 0.020
proteolysis GO:0006508 175 0.020
protein complex subunit organization GO:0071822 302 0.019
regulation of mrna splicing via spliceosome GO:0048024 3 0.019
limb morphogenesis GO:0035108 4 0.019
growth GO:0040007 165 0.019
protein oligomerization GO:0051259 191 0.019
gland development GO:0048732 155 0.019
regulation of molecular function GO:0065009 398 0.019
circadian regulation of gene expression GO:0032922 3 0.019
cellular modified amino acid metabolic process GO:0006575 61 0.019
positive regulation of apoptotic process GO:0043065 154 0.018
dna packaging GO:0006323 4 0.018
positive regulation of programmed cell death GO:0043068 157 0.018
gamete generation GO:0007276 124 0.018
regulation of system process GO:0044057 208 0.018
ion transmembrane transport GO:0034220 365 0.018
macromolecular complex assembly GO:0065003 273 0.018
cellular response to insulin stimulus GO:0032869 81 0.018
regulation of immunoglobulin production GO:0002637 4 0.018
cellular response to oxidative stress GO:0034599 76 0.018
coenzyme metabolic process GO:0006732 86 0.018
negative regulation of signaling GO:0023057 157 0.018
cardiac chamber development GO:0003205 1 0.018
neuron differentiation GO:0030182 368 0.017
gliogenesis GO:0042063 93 0.017
chromosome organization GO:0051276 36 0.017
developmental process involved in reproduction GO:0003006 159 0.017
regulation of dna metabolic process GO:0051052 60 0.017
nucleosome organization GO:0034728 1 0.017
regulation of programmed cell death GO:0043067 341 0.017
response to toxic substance GO:0009636 133 0.017
cellular component assembly GO:0022607 360 0.017
positive regulation of cytosolic calcium ion concentration GO:0007204 122 0.017
response to vitamin GO:0033273 131 0.017
catabolic process GO:0009056 351 0.017
regulation of multicellular organismal development GO:2000026 376 0.017
carbohydrate derivative metabolic process GO:1901135 346 0.017
response to other organism GO:0051707 220 0.017
positive regulation of cellular protein metabolic process GO:0032270 167 0.017
response to glucose GO:0009749 136 0.016
aging GO:0007568 241 0.016
regulation of transcription regulatory region dna binding GO:2000677 4 0.016
eye morphogenesis GO:0048592 4 0.016
cell fate determination GO:0001709 2 0.016
regulation of metal ion transport GO:0010959 118 0.016
regulation of cellular component movement GO:0051270 150 0.016
positive regulation of smooth muscle cell apoptotic process GO:0034393 2 0.016
response to radiation GO:0009314 137 0.016
response to decreased oxygen levels GO:0036293 237 0.016
carbon catabolite activation of transcription GO:0045991 1 0.016
response to oxidative stress GO:0006979 186 0.016
negative regulation of mitotic cell cycle phase transition GO:1901991 3 0.016
cellular response to transforming growth factor beta stimulus GO:0071560 41 0.016
embryonic pattern specification GO:0009880 1 0.016
cell projection organization GO:0030030 302 0.016
cellular homeostasis GO:0019725 252 0.016
neuron development GO:0048666 286 0.016
metal ion homeostasis GO:0055065 186 0.016
cell type specific apoptotic process GO:0097285 134 0.016
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.015
regulation of homeostatic process GO:0032844 101 0.015
histone methylation GO:0016571 3 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.015
circadian rhythm GO:0007623 88 0.015
regulation of membrane potential GO:0042391 110 0.015
anterior posterior pattern specification GO:0009952 1 0.015
response to oxygen levels GO:0070482 265 0.015
establishment of protein localization GO:0045184 141 0.015
homeostatic process GO:0042592 331 0.015
mrna metabolic process GO:0016071 20 0.015
single organism carbohydrate metabolic process GO:0044723 118 0.015
cofactor metabolic process GO:0051186 95 0.014
cellular response to hormone stimulus GO:0032870 247 0.014
response to temperature stimulus GO:0009266 94 0.014
negative regulation of cell communication GO:0010648 158 0.014
response to estrogen GO:0043627 232 0.014
cellular response to amino acid starvation GO:0034198 1 0.014
monovalent inorganic cation transport GO:0015672 172 0.014
regulation of hormone levels GO:0010817 187 0.014
programmed cell death GO:0012501 392 0.014
negative regulation of protein metabolic process GO:0051248 114 0.014
response to acid chemical GO:0001101 222 0.014
purine containing compound metabolic process GO:0072521 253 0.014
vasculogenesis GO:0001570 3 0.014
aromatic compound catabolic process GO:0019439 168 0.014
positive regulation of protein metabolic process GO:0051247 178 0.014
hepaticobiliary system development GO:0061008 90 0.014
response to metal ion GO:0010038 253 0.014
cellular response to growth factor stimulus GO:0071363 162 0.014
positive regulation of signal transduction GO:0009967 175 0.014
negative regulation of transcription from rna polymerase ii promoter GO:0000122 75 0.014
regulation of transferase activity GO:0051338 123 0.014
nucleotide metabolic process GO:0009117 279 0.014
purine nucleoside metabolic process GO:0042278 169 0.013
tissue development GO:0009888 252 0.013
macromolecule localization GO:0033036 252 0.013
cellular response to inorganic substance GO:0071241 65 0.013
positive regulation of cellular amine metabolic process GO:0033240 3 0.013
positive regulation of response to stimulus GO:0048584 285 0.013
negative regulation of signal transduction GO:0009968 83 0.013
negative regulation of organ growth GO:0046621 3 0.013
protein ubiquitination involved in ubiquitin dependent protein catabolic process GO:0042787 3 0.013
embryonic hindlimb morphogenesis GO:0035116 2 0.013
calcium ion homeostasis GO:0055074 162 0.013
organic hydroxy compound metabolic process GO:1901615 115 0.013
positive regulation of phosphorus metabolic process GO:0010562 262 0.013
negative regulation of protein modification process GO:0031400 52 0.013
multi organism reproductive process GO:0044703 262 0.013
receptor mediated endocytosis GO:0006898 42 0.013
cytosolic calcium ion homeostasis GO:0051480 140 0.013
regulation of cellular component organization GO:0051128 368 0.013
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathway GO:0090101 2 0.013
cell cell signaling GO:0007267 335 0.013
protein complex assembly GO:0006461 263 0.013
anion transport GO:0006820 178 0.013
response to hexose GO:0009746 144 0.013
purine ribonucleoside metabolic process GO:0046128 168 0.013
regulation of ion transport GO:0043269 245 0.013
forebrain development GO:0030900 98 0.013
brain development GO:0007420 247 0.013
dna integrity checkpoint GO:0031570 2 0.013
multicellular organismal signaling GO:0035637 44 0.012
positive regulation of neuron differentiation GO:0045666 126 0.012
cellular metal ion homeostasis GO:0006875 172 0.012
negative regulation of response to stimulus GO:0048585 155 0.012
nitrogen compound transport GO:0071705 229 0.012
single organism biosynthetic process GO:0044711 342 0.012
vasculature development GO:0001944 70 0.012
organophosphate metabolic process GO:0019637 370 0.012
histone h3 k9 modification GO:0061647 2 0.012
regulation of cell growth GO:0001558 85 0.012
positive regulation of cell communication GO:0010647 271 0.012
cellular chemical homeostasis GO:0055082 247 0.012
positive regulation of catalytic activity GO:0043085 184 0.012
purine ribonucleoside monophosphate metabolic process GO:0009167 84 0.012
alcohol metabolic process GO:0006066 77 0.012
response to fungicide GO:0060992 20 0.012
small molecule catabolic process GO:0044282 59 0.012
chromatin remodeling GO:0006338 3 0.012
negative regulation of multicellular organismal process GO:0051241 203 0.012
epithelium development GO:0060429 96 0.012
axis specification GO:0009798 4 0.012
single organism behavior GO:0044708 130 0.012
negative regulation of molecular function GO:0044092 133 0.012
response to transforming growth factor beta GO:0071559 46 0.012
ribose phosphate metabolic process GO:0019693 235 0.012
bmp signaling pathway GO:0030509 4 0.012
cellular divalent inorganic cation homeostasis GO:0072503 162 0.012
cellular carbohydrate metabolic process GO:0044262 72 0.012
response to ammonium ion GO:0060359 71 0.011
regulation of synaptic transmission GO:0050804 141 0.011
regulation of cellular localization GO:0060341 263 0.011
ion homeostasis GO:0050801 212 0.011
nucleoside metabolic process GO:0009116 179 0.011
chromosome segregation GO:0007059 2 0.011
muscle cell differentiation GO:0042692 52 0.011
circulatory system development GO:0072359 134 0.011
response to activity GO:0014823 73 0.011
response to monosaccharide GO:0034284 159 0.011
atp catabolic process GO:0006200 54 0.011
protein phosphorylation GO:0006468 345 0.011
negative regulation of nervous system development GO:0051961 79 0.011
negative regulation of phosphorus metabolic process GO:0010563 80 0.011
blood vessel development GO:0001568 69 0.011
negative regulation of developmental process GO:0051093 125 0.011
response to molecule of bacterial origin GO:0002237 194 0.011
protein complex biogenesis GO:0070271 263 0.011
regulation of intracellular signal transduction GO:1902531 218 0.011
response to growth factor GO:0070848 189 0.011
mrna stabilization GO:0048255 2 0.011
small molecule biosynthetic process GO:0044283 124 0.011
lipid storage GO:0019915 1 0.011
negative regulation of cellular component organization GO:0051129 83 0.011
nucleosome disassembly GO:0006337 1 0.011
intracellular transport GO:0046907 185 0.011
positive regulation of intracellular signal transduction GO:1902533 138 0.011
chromatin modification GO:0016568 33 0.011
cellular response to acid chemical GO:0071229 75 0.011
adult locomotory behavior GO:0008344 4 0.011
regulation of anatomical structure size GO:0090066 135 0.011
negative regulation of cell cycle phase transition GO:1901988 4 0.011
regulation of cell differentiation GO:0045595 320 0.011
response to carbohydrate GO:0009743 183 0.011
purine ribonucleotide metabolic process GO:0009150 227 0.011
response to ionizing radiation GO:0010212 59 0.011
developmental growth GO:0048589 100 0.011
intracellular signal transduction GO:0035556 314 0.011
organic cyclic compound catabolic process GO:1901361 175 0.011
small gtpase mediated signal transduction GO:0007264 36 0.010
single organism cellular localization GO:1902580 102 0.010
covalent chromatin modification GO:0016569 30 0.010
alternative mrna splicing via spliceosome GO:0000380 4 0.010
protein modification by small protein conjugation or removal GO:0070647 35 0.010
negative regulation of rna splicing GO:0033119 3 0.010
behavior GO:0007610 205 0.010
sequestering of metal ion GO:0051238 9 0.010
regulation of neurogenesis GO:0050767 247 0.010
cellular ion homeostasis GO:0006873 184 0.010
organic substance catabolic process GO:1901575 316 0.010
response to bacterium GO:0009617 200 0.010
regulation of viral transcription GO:0046782 2 0.010
regulation of kinase activity GO:0043549 117 0.010
organonitrogen compound catabolic process GO:1901565 179 0.010
ubiquitin dependent protein catabolic process GO:0006511 14 0.010
sexual reproduction GO:0019953 148 0.010
regulation of g2 m transition of mitotic cell cycle GO:0010389 4 0.010
hormone secretion GO:0046879 115 0.010
development of primary sexual characteristics GO:0045137 107 0.010
reactive oxygen species biosynthetic process GO:1903409 8 0.010
negative regulation of innate immune response GO:0045824 4 0.010
muscle system process GO:0003012 115 0.010

Safb disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.023
nervous system disease DOID:863 0 0.023
sensory system disease DOID:0050155 0 0.010