Rattus norvegicus

0 known processes

Smg5

Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)

Smg5 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
purine ribonucleoside catabolic process GO:0046130 124 0.202
rna metabolic process GO:0016070 406 0.175
regulation of transcription dna templated GO:0006355 374 0.169
ribonucleoside metabolic process GO:0009119 174 0.155
ribonucleotide catabolic process GO:0009261 136 0.150
purine ribonucleotide catabolic process GO:0009154 136 0.145
catabolic process GO:0009056 351 0.144
single organism catabolic process GO:0044712 283 0.140
glycosyl compound catabolic process GO:1901658 126 0.137
rna biosynthetic process GO:0032774 380 0.134
purine nucleoside catabolic process GO:0006152 124 0.128
purine nucleoside triphosphate catabolic process GO:0009146 122 0.119
regulation of molecular function GO:0065009 398 0.102
nucleoside catabolic process GO:0009164 126 0.100
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.099
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.090
organophosphate catabolic process GO:0046434 148 0.087
regulation of rna metabolic process GO:0051252 391 0.084
nucleoside triphosphate catabolic process GO:0009143 123 0.083
ribonucleoside catabolic process GO:0042454 126 0.081
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.080
glycosyl compound metabolic process GO:1901657 182 0.079
ribonucleoside triphosphate catabolic process GO:0009203 122 0.078
regulation of cellular catabolic process GO:0031329 101 0.075
regulation of catabolic process GO:0009894 113 0.073
ribonucleoside triphosphate metabolic process GO:0009199 141 0.073
single organism carbohydrate metabolic process GO:0044723 118 0.073
nucleoside triphosphate metabolic process GO:0009141 144 0.071
organic substance catabolic process GO:1901575 316 0.070
cellular catabolic process GO:0044248 295 0.069
purine nucleoside triphosphate metabolic process GO:0009144 141 0.068
aromatic compound catabolic process GO:0019439 168 0.067
ras protein signal transduction GO:0007265 29 0.067
purine containing compound catabolic process GO:0072523 138 0.065
cellular component biogenesis GO:0044085 368 0.065
purine nucleoside metabolic process GO:0042278 169 0.061
regulation of ras gtpase activity GO:0032318 32 0.059
purine ribonucleoside metabolic process GO:0046128 168 0.058
regulation of small gtpase mediated signal transduction GO:0051056 48 0.058
response to extracellular stimulus GO:0009991 380 0.058
negative regulation of metabolic process GO:0009892 331 0.057
ribonucleotide metabolic process GO:0009259 231 0.056
cellular component movement GO:0006928 248 0.056
transcription dna templated GO:0006351 377 0.056
nucleotide catabolic process GO:0009166 139 0.055
gtp catabolic process GO:0006184 71 0.055
purine nucleotide catabolic process GO:0006195 136 0.055
actin filament based process GO:0030029 86 0.055
macromolecular complex assembly GO:0065003 273 0.054
oxoacid metabolic process GO:0043436 290 0.054
purine ribonucleoside triphosphate metabolic process GO:0009205 140 0.054
regulation of protein metabolic process GO:0051246 289 0.054
carboxylic acid metabolic process GO:0019752 289 0.054
carbohydrate derivative metabolic process GO:1901135 346 0.054
protein complex biogenesis GO:0070271 263 0.052
carbohydrate derivative catabolic process GO:1901136 147 0.051
programmed cell death GO:0012501 392 0.051
negative regulation of rna biosynthetic process GO:1902679 118 0.051
cellular nitrogen compound catabolic process GO:0044270 163 0.050
positive regulation of rab gtpase activity GO:0032851 3 0.050
nucleoside phosphate catabolic process GO:1901292 140 0.049
regulation of nucleotide metabolic process GO:0006140 117 0.047
positive regulation of phosphorus metabolic process GO:0010562 262 0.047
regulation of rab protein signal transduction GO:0032483 3 0.047
organonitrogen compound catabolic process GO:1901565 179 0.046
regulation of nucleic acid templated transcription GO:1903506 380 0.045
macromolecular complex subunit organization GO:0043933 339 0.045
organelle organization GO:0006996 266 0.045
protein localization GO:0008104 191 0.044
nucleic acid templated transcription GO:0097659 379 0.044
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.043
regulation of catalytic activity GO:0050790 304 0.043
guanosine containing compound metabolic process GO:1901068 74 0.043
nucleobase containing compound catabolic process GO:0034655 152 0.042
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.042
cellular amine metabolic process GO:0044106 38 0.042
guanosine containing compound catabolic process GO:1901069 71 0.041
nucleobase containing small molecule metabolic process GO:0055086 316 0.040
nucleotide metabolic process GO:0009117 279 0.040
single organism intracellular transport GO:1902582 166 0.039
nucleoside metabolic process GO:0009116 179 0.039
regulation of protein modification process GO:0031399 194 0.039
cellular amino acid metabolic process GO:0006520 107 0.039
small gtpase mediated signal transduction GO:0007264 36 0.039
positive regulation of multicellular organismal process GO:0051240 387 0.038
organic cyclic compound catabolic process GO:1901361 175 0.038
single organism organelle organization GO:1902589 180 0.038
negative regulation of transcription dna templated GO:0045892 116 0.037
positive regulation of nucleic acid templated transcription GO:1903508 197 0.037
protein complex subunit organization GO:0071822 302 0.037
regulation of phosphorus metabolic process GO:0051174 349 0.037
Human
positive regulation of phosphate metabolic process GO:0045937 262 0.036
cellular component assembly GO:0022607 360 0.036
regulation of nucleotide catabolic process GO:0030811 65 0.036
organophosphate metabolic process GO:0019637 370 0.036
intracellular transport GO:0046907 185 0.035
gtp metabolic process GO:0046039 72 0.035
cell migration GO:0016477 197 0.034
positive regulation of ras gtpase activity GO:0032320 28 0.034
positive regulation of rna metabolic process GO:0051254 203 0.034
positive regulation of transcription dna templated GO:0045893 197 0.033
regulation of cellular ketone metabolic process GO:0010565 27 0.033
regulation of cellular amino acid metabolic process GO:0006521 2 0.033
positive regulation of cellular component organization GO:0051130 200 0.033
purine nucleotide metabolic process GO:0006163 229 0.033
cellular ketone metabolic process GO:0042180 51 0.032
locomotion GO:0040011 237 0.032
positive regulation of catalytic activity GO:0043085 184 0.032
anatomical structure morphogenesis GO:0009653 298 0.031
cellular homeostasis GO:0019725 252 0.031
positive regulation of purine nucleotide catabolic process GO:0033123 53 0.031
negative regulation of cellular biosynthetic process GO:0031327 161 0.031
transcription from rna polymerase ii promoter GO:0006366 252 0.031
single organism reproductive process GO:0044702 297 0.031
neuron development GO:0048666 286 0.031
purine ribonucleotide metabolic process GO:0009150 227 0.030
positive regulation of catabolic process GO:0009896 78 0.030
actin cytoskeleton organization GO:0030036 73 0.030
regulation of rna biosynthetic process GO:2001141 381 0.030
heterocycle catabolic process GO:0046700 167 0.030
negative regulation of gene expression GO:0010629 199 0.030
regulation of cellular amine metabolic process GO:0033238 8 0.029
positive regulation of gtpase activity GO:0043547 47 0.028
regulation of protein import into nucleus GO:0042306 24 0.028
negative regulation of rna metabolic process GO:0051253 123 0.027
positive regulation of nucleotide catabolic process GO:0030813 53 0.027
positive regulation of cell communication GO:0010647 271 0.027
negative regulation of macromolecule metabolic process GO:0010605 260 0.027
response to inorganic substance GO:0010035 377 0.027
response to nutrient levels GO:0031667 370 0.026
organic acid metabolic process GO:0006082 292 0.026
regulation of protein phosphorylation GO:0001932 183 0.026
positive regulation of biosynthetic process GO:0009891 319 0.026
positive regulation of molecular function GO:0044093 230 0.026
intracellular signal transduction GO:0035556 314 0.025
regulation of phosphorylation GO:0042325 248 0.025
cellular response to oxygen containing compound GO:1901701 386 0.025
regulation of cellular protein metabolic process GO:0032268 267 0.025
positive regulation of cellular catabolic process GO:0031331 71 0.025
cellular response to growth factor stimulus GO:0071363 162 0.025
protein complex assembly GO:0006461 263 0.025
multi organism reproductive process GO:0044703 262 0.025
regulation of purine nucleotide catabolic process GO:0033121 65 0.025
localization of cell GO:0051674 202 0.024
ribose phosphate metabolic process GO:0019693 235 0.024
amine metabolic process GO:0009308 38 0.024
regulation of phosphate metabolic process GO:0019220 349 0.024
Human
positive regulation of cellular amine metabolic process GO:0033240 3 0.023
positive regulation of protein phosphorylation GO:0001934 135 0.023
purine containing compound metabolic process GO:0072521 253 0.023
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 4 0.023
regulation of proteasomal protein catabolic process GO:0061136 4 0.023
positive regulation of cell death GO:0010942 184 0.023
chemical homeostasis GO:0048878 292 0.023
positive regulation of neurogenesis GO:0050769 165 0.023
positive regulation of nervous system development GO:0051962 178 0.023
cellular protein localization GO:0034613 122 0.023
positive regulation of gtp catabolic process GO:0033126 48 0.022
nucleoside phosphate metabolic process GO:0006753 283 0.022
regulation of gtpase activity GO:0043087 57 0.022
positive regulation of neuron differentiation GO:0045666 126 0.022
regulation of ras protein signal transduction GO:0046578 45 0.022
positive regulation of purine nucleotide metabolic process GO:1900544 91 0.022
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.022
positive regulation of developmental process GO:0051094 283 0.022
cellular response to external stimulus GO:0071496 118 0.022
regulation of rab gtpase activity GO:0032313 3 0.022
response to nutrient GO:0007584 248 0.021
regulation of neuron projection development GO:0010975 161 0.021
regulation of cellular component biogenesis GO:0044087 86 0.021
oxidation reduction process GO:0055114 304 0.021
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.021
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.021
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.021
protein targeting to nucleus GO:0044744 35 0.020
cytoskeleton organization GO:0007010 111 0.020
positive regulation of nucleoside metabolic process GO:0045979 55 0.020
macromolecule localization GO:0033036 252 0.020
neurological system process GO:0050877 219 0.020
positive regulation of hydrolase activity GO:0051345 86 0.020
peptidyl amino acid modification GO:0018193 126 0.020
rab protein signal transduction GO:0032482 1 0.020
positive regulation of cell differentiation GO:0045597 217 0.020
negative regulation of cellular metabolic process GO:0031324 281 0.019
apoptotic process GO:0006915 381 0.018
positive regulation of cellular biosynthetic process GO:0031328 295 0.018
regulation of hydrolase activity GO:0051336 143 0.018
positive regulation of gene expression GO:0010628 244 0.018
cellular chemical homeostasis GO:0055082 247 0.018
negative regulation of nucleic acid templated transcription GO:1903507 117 0.018
neuronal action potential GO:0019228 35 0.018
positive regulation of cell development GO:0010720 176 0.018
cellular response to lipid GO:0071396 201 0.018
positive regulation of neuron projection development GO:0010976 99 0.018
positive regulation of phosphorylation GO:0042327 177 0.018
regulation of multicellular organismal development GO:2000026 376 0.018
single organism nuclear import GO:1902593 35 0.018
response to toxic substance GO:0009636 133 0.018
regulation of gtp catabolic process GO:0033124 58 0.018
regulation of nucleoside metabolic process GO:0009118 66 0.018
regulation of nucleocytoplasmic transport GO:0046822 28 0.017
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.017
neuron projection development GO:0031175 273 0.017
negative regulation of cell death GO:0060548 229 0.017
multicellular organismal reproductive process GO:0048609 233 0.016
cell projection organization GO:0030030 302 0.016
circulatory system development GO:0072359 134 0.016
proteolysis GO:0006508 175 0.016
cellular response to organic cyclic compound GO:0071407 202 0.016
multicellular organismal signaling GO:0035637 44 0.016
positive regulation of protein modification process GO:0031401 142 0.016
regulation of cell proliferation GO:0042127 359 0.016
response to vitamin GO:0033273 131 0.016
cellular macromolecule catabolic process GO:0044265 29 0.016
protein phosphorylation GO:0006468 345 0.016
regulation of signal transduction GO:0009966 318 0.016
cardiovascular system development GO:0072358 134 0.016
brain development GO:0007420 247 0.016
synaptic growth at neuromuscular junction GO:0051124 1 0.016
protein import into nucleus GO:0006606 35 0.016
neuron differentiation GO:0030182 368 0.016
macromolecule catabolic process GO:0009057 58 0.015
positive regulation of cell projection organization GO:0031346 111 0.015
multicellular organism reproduction GO:0032504 233 0.015
negative regulation of biosynthetic process GO:0009890 168 0.015
cellular ion homeostasis GO:0006873 184 0.015
nuclear transport GO:0051169 49 0.015
positive regulation of rna biosynthetic process GO:1902680 197 0.015
anterior posterior pattern specification GO:0009952 1 0.015
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.015
gastrulation GO:0007369 2 0.015
cytoplasmic transport GO:0016482 115 0.014
regulation of cell development GO:0060284 263 0.014
protein targeting GO:0006605 61 0.014
positive regulation of nucleotide metabolic process GO:0045981 91 0.014
protein localization to nucleus GO:0034504 39 0.014
positive regulation of protein metabolic process GO:0051247 178 0.014
regulation of response to stress GO:0080134 126 0.014
sexual reproduction GO:0019953 148 0.014
rho protein signal transduction GO:0007266 11 0.014
action potential GO:0001508 54 0.014
regulation of neurogenesis GO:0050767 247 0.013
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.013
non canonical wnt signaling pathway GO:0035567 3 0.013
lipid storage GO:0019915 1 0.013
cell cycle GO:0007049 101 0.013
cellular macromolecular complex assembly GO:0034622 58 0.013
cellular cation homeostasis GO:0030003 180 0.013
embryonic pattern specification GO:0009880 1 0.013
embryonic skeletal system development GO:0048706 3 0.013
nucleocytoplasmic transport GO:0006913 48 0.013
regulation of cell differentiation GO:0045595 320 0.013
regulation of nervous system development GO:0051960 264 0.013
regulation of apoptotic process GO:0042981 335 0.013
macroautophagy GO:0016236 4 0.013
response to metal ion GO:0010038 253 0.013
protein transport GO:0015031 132 0.013
motor neuron axon guidance GO:0008045 1 0.012
establishment of protein localization GO:0045184 141 0.012
head development GO:0060322 247 0.012
cellular response to stress GO:0033554 269 0.012
skeletal system development GO:0001501 41 0.012
positive regulation of apoptotic process GO:0043065 154 0.012
regulation of intracellular transport GO:0032386 65 0.012
single organism cellular localization GO:1902580 102 0.012
peptidyl tyrosine phosphorylation GO:0018108 72 0.012
reproductive structure development GO:0048608 128 0.012
protein catabolic process GO:0030163 30 0.012
reproductive process GO:0022414 372 0.012
tissue development GO:0009888 252 0.012
regulation of kinase activity GO:0043549 117 0.012
developmental growth GO:0048589 100 0.012
positive regulation of cell proliferation GO:0008284 249 0.012
regulation of neuron death GO:1901214 115 0.012
synaptic transmission GO:0007268 235 0.012
response to glucose GO:0009749 136 0.012
negative regulation of apoptotic process GO:0043066 181 0.012
negative regulation of programmed cell death GO:0043069 183 0.011
nuclear import GO:0051170 35 0.011
growth GO:0040007 165 0.011
regulation of anatomical structure size GO:0090066 135 0.011
developmental process involved in reproduction GO:0003006 159 0.011
regulation of body fluid levels GO:0050878 90 0.011
membrane organization GO:0061024 94 0.011
regulation of membrane potential GO:0042391 110 0.011
axis specification GO:0009798 4 0.011
single organism membrane organization GO:0044802 74 0.011
regulation of programmed cell death GO:0043067 341 0.011
negative regulation of mitotic cell cycle phase transition GO:1901991 3 0.011
ion transmembrane transport GO:0034220 365 0.011
protein ubiquitination involved in ubiquitin dependent protein catabolic process GO:0042787 3 0.011
muscle structure development GO:0061061 87 0.011
homeostatic process GO:0042592 331 0.011
response to biotic stimulus GO:0009607 226 0.011
negative regulation of cell cycle phase transition GO:1901988 4 0.011
response to mechanical stimulus GO:0009612 134 0.011
negative regulation of growth GO:0045926 37 0.011
regulation of cellular component organization GO:0051128 368 0.011
cellular response to endogenous stimulus GO:0071495 377 0.011
mitotic cell cycle GO:0000278 49 0.011
regulation of embryonic development GO:0045995 2 0.011
positive regulation of transcription factor import into nucleus GO:0042993 4 0.011
transmission of nerve impulse GO:0019226 42 0.011
reproductive system development GO:0061458 128 0.010
axon ensheathment GO:0008366 40 0.010
positive regulation of transferase activity GO:0051347 81 0.010
intracellular protein transport GO:0006886 79 0.010
reactive nitrogen species metabolic process GO:2001057 1 0.010
regulation of cell motility GO:2000145 131 0.010
regulation of cell projection organization GO:0031344 175 0.010

Smg5 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.017
musculoskeletal system disease DOID:17 0 0.017
connective tissue disease DOID:65 0 0.015