Rattus norvegicus

73 known processes

Usf1

upstream transcription factor 1

Usf1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of nucleic acid templated transcription GO:1903506 380 0.159
enzyme linked receptor protein signaling pathway GO:0007167 116 0.157
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.141
regulation of rna biosynthetic process GO:2001141 381 0.123
cellular response to endogenous stimulus GO:0071495 377 0.123
Human
reproductive structure development GO:0048608 128 0.107
head development GO:0060322 247 0.101
cell adhesion GO:0007155 110 0.098
response to other organism GO:0051707 220 0.095
protein phosphorylation GO:0006468 345 0.094
negative regulation of cellular component organization GO:0051129 83 0.093
developmental process involved in reproduction GO:0003006 159 0.093
biological adhesion GO:0022610 110 0.091
rna biosynthetic process GO:0032774 380 0.087
cellular amino acid metabolic process GO:0006520 107 0.085
intracellular transport GO:0046907 185 0.083
regulation of arp2 3 complex mediated actin nucleation GO:0034315 2 0.083
chemical homeostasis GO:0048878 292 0.081
catabolic process GO:0009056 351 0.078
regulation of molecular function GO:0065009 398 0.075
neuron differentiation GO:0030182 368 0.073
transcription dna templated GO:0006351 377 0.071
multicellular organismal reproductive process GO:0048609 233 0.071
protein localization GO:0008104 191 0.070
behavior GO:0007610 205 0.068
regulation of cell development GO:0060284 263 0.067
regulation of cellular protein metabolic process GO:0032268 267 0.065
regulation of neuron differentiation GO:0045664 208 0.064
proteolysis GO:0006508 175 0.063
regulation of organelle organization GO:0033043 80 0.060
cell cell signaling GO:0007267 335 0.059
regulation of protein metabolic process GO:0051246 289 0.059
neuron apoptotic process GO:0051402 88 0.059
regulation of rna metabolic process GO:0051252 391 0.056
motor neuron axon guidance GO:0008045 1 0.056
regulation of cellular ketone metabolic process GO:0010565 27 0.055
regulation of synaptic transmission GO:0050804 141 0.054
single organism reproductive process GO:0044702 297 0.053
brain development GO:0007420 247 0.053
nucleic acid templated transcription GO:0097659 379 0.053
positive regulation of transport GO:0051050 245 0.052
macromolecular complex subunit organization GO:0043933 339 0.052
central nervous system development GO:0007417 311 0.052
regulation of neurogenesis GO:0050767 247 0.051
golgi vesicle transport GO:0048193 22 0.051
regulation of dendrite development GO:0050773 59 0.051
regulation of multicellular organismal development GO:2000026 376 0.050
regulation of transcription dna templated GO:0006355 374 0.050
multi organism reproductive process GO:0044703 262 0.050
multicellular organism reproduction GO:0032504 233 0.050
positive regulation of phosphate metabolic process GO:0045937 262 0.050
synaptic growth at neuromuscular junction GO:0051124 1 0.049
neuron projection development GO:0031175 273 0.049
reproduction GO:0000003 245 0.048
cell migration GO:0016477 197 0.048
regulation of protein modification process GO:0031399 194 0.046
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.046
cellular component biogenesis GO:0044085 368 0.045
regulation of phosphorus metabolic process GO:0051174 349 0.045
regulation of cellular localization GO:0060341 263 0.044
protein transport GO:0015031 132 0.043
protein complex subunit organization GO:0071822 302 0.043
multi multicellular organism process GO:0044706 138 0.043
neuron development GO:0048666 286 0.042
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.042
ion homeostasis GO:0050801 212 0.042
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.041
rna metabolic process GO:0016070 406 0.041
cellular ion homeostasis GO:0006873 184 0.040
metal ion homeostasis GO:0055065 186 0.040
cellular response to extracellular stimulus GO:0031668 73 0.039
Human
vesicle mediated transport GO:0016192 181 0.039
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.038
cellular response to hormone stimulus GO:0032870 247 0.038
Human
negative regulation of biosynthetic process GO:0009890 168 0.038
cell projection organization GO:0030030 302 0.037
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.037
endocytosis GO:0006897 84 0.037
transmembrane transport GO:0055085 412 0.037
cation homeostasis GO:0055080 195 0.036
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.036
cellular catabolic process GO:0044248 295 0.036
single organism catabolic process GO:0044712 283 0.036
cellular metal ion homeostasis GO:0006875 172 0.036
ion transmembrane transport GO:0034220 365 0.036
regulation of phosphorylation GO:0042325 248 0.036
negative regulation of cellular biosynthetic process GO:0031327 161 0.036
cytosolic calcium ion homeostasis GO:0051480 140 0.035
negative regulation of rna biosynthetic process GO:1902679 118 0.035
response to biotic stimulus GO:0009607 226 0.035
cellular response to external stimulus GO:0071496 118 0.035
Human
carboxylic acid metabolic process GO:0019752 289 0.035
protein targeting GO:0006605 61 0.035
reproductive process GO:0022414 372 0.035
chemotaxis GO:0006935 66 0.035
regulation of phosphate metabolic process GO:0019220 349 0.034
positive regulation of programmed cell death GO:0043068 157 0.034
positive regulation of molecular function GO:0044093 230 0.034
regulation of neuron projection development GO:0010975 161 0.033
negative regulation of apoptotic process GO:0043066 181 0.033
intracellular signal transduction GO:0035556 314 0.033
response to inorganic substance GO:0010035 377 0.033
protein complex assembly GO:0006461 263 0.033
amine metabolic process GO:0009308 38 0.033
transmembrane receptor protein tyrosine kinase signaling pathway GO:0007169 85 0.032
regulation of anatomical structure size GO:0090066 135 0.032
organic acid metabolic process GO:0006082 292 0.032
cell cycle GO:0007049 101 0.032
regulation of cellular component organization GO:0051128 368 0.032
reproductive system development GO:0061458 128 0.032
negative regulation of metabolic process GO:0009892 331 0.031
cellular response to growth factor stimulus GO:0071363 162 0.031
regulation of cell differentiation GO:0045595 320 0.031
secretion GO:0046903 307 0.031
heart morphogenesis GO:0003007 3 0.031
synaptic transmission GO:0007268 235 0.030
regulation of cellular amine metabolic process GO:0033238 8 0.030
positive regulation of transcription dna templated GO:0045893 197 0.030
macromolecule localization GO:0033036 252 0.030
anion transmembrane transport GO:0098656 77 0.029
cellular response to stress GO:0033554 269 0.029
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.029
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.029
protein localization to membrane GO:0072657 36 0.029
cellular response to nutrient levels GO:0031669 60 0.028
Human
anion transport GO:0006820 178 0.028
cellular ketone metabolic process GO:0042180 51 0.028
regulation of catalytic activity GO:0050790 304 0.028
positive regulation of phosphorylation GO:0042327 177 0.028
cellular protein localization GO:0034613 122 0.028
secretion by cell GO:0032940 248 0.028
calcium ion homeostasis GO:0055074 162 0.028
gliogenesis GO:0042063 93 0.028
cellular chemical homeostasis GO:0055082 247 0.028
cell type specific apoptotic process GO:0097285 134 0.027
regulation of response to stress GO:0080134 126 0.027
positive regulation of cellular biosynthetic process GO:0031328 295 0.027
positive regulation of cellular component organization GO:0051130 200 0.026
oxoacid metabolic process GO:0043436 290 0.026
organelle organization GO:0006996 266 0.026
response to starvation GO:0042594 59 0.026
regulation of programmed cell death GO:0043067 341 0.026
cell motility GO:0048870 202 0.026
locomotion GO:0040011 237 0.026
positive regulation of signaling GO:0023056 270 0.026
cellular divalent inorganic cation homeostasis GO:0072503 162 0.026
response to oxidative stress GO:0006979 186 0.025
regulation of ion transport GO:0043269 245 0.025
positive regulation of protein metabolic process GO:0051247 178 0.025
positive regulation of cellular amine metabolic process GO:0033240 3 0.025
positive regulation of protein modification process GO:0031401 142 0.025
regulation of actin cytoskeleton organization GO:0032956 30 0.025
regulation of vesicle mediated transport GO:0060627 81 0.025
macroautophagy GO:0016236 4 0.024
macromolecular complex assembly GO:0065003 273 0.024
arp2 3 complex mediated actin nucleation GO:0034314 2 0.024
regulation of membrane potential GO:0042391 110 0.024
regulation of protein complex assembly GO:0043254 33 0.024
peptidyl tyrosine phosphorylation GO:0018108 72 0.024
negative regulation of rna metabolic process GO:0051253 123 0.024
regulation of cellular amino acid metabolic process GO:0006521 2 0.024
response to mechanical stimulus GO:0009612 134 0.024
glial cell differentiation GO:0010001 65 0.023
positive regulation of protein phosphorylation GO:0001934 135 0.023
regulation of synaptic plasticity GO:0048167 70 0.023
nitrogen compound transport GO:0071705 229 0.023
negative regulation of transcription dna templated GO:0045892 116 0.023
regulation of apoptotic process GO:0042981 335 0.023
wound healing GO:0042060 122 0.023
protein autophosphorylation GO:0046777 66 0.023
carbohydrate derivative metabolic process GO:1901135 346 0.023
positive regulation of actin filament polymerization GO:0030838 5 0.023
receptor mediated endocytosis GO:0006898 42 0.023
positive regulation of biosynthetic process GO:0009891 319 0.023
cellular component movement GO:0006928 248 0.023
negative regulation of cellular metabolic process GO:0031324 281 0.023
multicellular organismal signaling GO:0035637 44 0.023
regulation of cell cycle GO:0051726 73 0.022
cytoplasmic transport GO:0016482 115 0.022
taxis GO:0042330 67 0.022
neuron death GO:0070997 127 0.022
cellular amine metabolic process GO:0044106 38 0.022
regulation of locomotion GO:0040012 148 0.022
response to growth factor GO:0070848 189 0.022
regulation of actin nucleation GO:0051125 2 0.022
sexual reproduction GO:0019953 148 0.022
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.022
positive regulation of secretion by cell GO:1903532 128 0.022
single organism cellular localization GO:1902580 102 0.022
regulation of protein phosphorylation GO:0001932 183 0.022
response to glucose GO:0009749 136 0.022
regulation of cellular component biogenesis GO:0044087 86 0.022
single organism membrane organization GO:0044802 74 0.021
positive regulation of multicellular organismal process GO:0051240 387 0.021
response to external biotic stimulus GO:0043207 221 0.021
positive regulation of cytosolic calcium ion concentration GO:0007204 122 0.021
negative regulation of natural killer cell mediated immunity GO:0002716 4 0.021
localization of cell GO:0051674 202 0.021
nucleoside phosphate metabolic process GO:0006753 283 0.021
cellular macromolecule localization GO:0070727 122 0.021
regulation of secretion by cell GO:1903530 208 0.020
positive regulation of apoptotic process GO:0043065 154 0.020
olfactory learning GO:0008355 1 0.020
positive regulation of developmental process GO:0051094 283 0.020
leukocyte activation GO:0045321 76 0.020
carbohydrate derivative catabolic process GO:1901136 147 0.020
cellular nitrogen compound catabolic process GO:0044270 163 0.020
organic substance catabolic process GO:1901575 316 0.020
divalent inorganic cation homeostasis GO:0072507 165 0.020
negative regulation of nucleic acid templated transcription GO:1903507 117 0.019
protein modification by small protein conjugation or removal GO:0070647 35 0.019
apoptotic process GO:0006915 381 0.019
transcription from rna polymerase ii promoter GO:0006366 252 0.019
positive regulation of phosphorus metabolic process GO:0010562 262 0.019
sex differentiation GO:0007548 113 0.019
cell cycle process GO:0022402 57 0.019
positive regulation of cell death GO:0010942 184 0.019
positive regulation of neurogenesis GO:0050769 165 0.019
organophosphate metabolic process GO:0019637 370 0.018
regulation of dna metabolic process GO:0051052 60 0.018
organic hydroxy compound transport GO:0015850 77 0.018
actin filament based process GO:0030029 86 0.018
intra golgi vesicle mediated transport GO:0006891 3 0.018
regulation of cell projection organization GO:0031344 175 0.018
muscle cell apoptotic process GO:0010657 30 0.018
response to extracellular stimulus GO:0009991 380 0.018
Human
protein oligomerization GO:0051259 191 0.018
g protein coupled receptor signaling pathway GO:0007186 242 0.018
forebrain development GO:0030900 98 0.018
nucleobase containing compound catabolic process GO:0034655 152 0.018
axonogenesis GO:0007409 71 0.018
negative regulation of gene expression GO:0010629 199 0.018
nucleotide metabolic process GO:0009117 279 0.018
rhythmic process GO:0048511 156 0.018
response to radiation GO:0009314 137 0.018
regulation of endocytosis GO:0030100 42 0.018
salivary gland development GO:0007431 3 0.018
positive regulation of neuron differentiation GO:0045666 126 0.018
response to oxygen levels GO:0070482 265 0.018
Human
eye development GO:0001654 50 0.018
muscle system process GO:0003012 115 0.018
regulation of body fluid levels GO:0050878 90 0.018
negative regulation of innate immune response GO:0045824 4 0.017
positive regulation of cellular protein metabolic process GO:0032270 167 0.017
establishment of protein localization GO:0045184 141 0.017
development of primary sexual characteristics GO:0045137 107 0.017
vesicle fusion with golgi apparatus GO:0048280 4 0.017
lipid storage GO:0019915 1 0.017
response to ethanol GO:0045471 162 0.017
regulation of immune system process GO:0002682 123 0.017
vesicle fusion GO:0006906 14 0.017
positive regulation of synaptic transmission GO:0050806 62 0.017
single organism cell adhesion GO:0098602 46 0.017
ras protein signal transduction GO:0007265 29 0.017
single organism intracellular transport GO:1902582 166 0.017
organic cyclic compound catabolic process GO:1901361 175 0.017
regulation of nervous system development GO:0051960 264 0.017
programmed cell death GO:0012501 392 0.016
female pregnancy GO:0007565 122 0.016
membrane organization GO:0061024 94 0.016
cellular macromolecule catabolic process GO:0044265 29 0.016
cellular calcium ion homeostasis GO:0006874 160 0.016
regulation of cell proliferation GO:0042127 359 0.016
amide transport GO:0042886 105 0.016
neurological system process GO:0050877 219 0.016
nucleoside metabolic process GO:0009116 179 0.016
homeostatic process GO:0042592 331 0.016
positive regulation of catalytic activity GO:0043085 184 0.016
cellular response to peptide hormone stimulus GO:0071375 120 0.016
Human
energy reserve metabolic process GO:0006112 25 0.016
actin nucleation GO:0045010 2 0.016
cellular component assembly GO:0022607 360 0.016
oxidation reduction process GO:0055114 304 0.016
salivary gland morphogenesis GO:0007435 1 0.016
negative regulation of neuron death GO:1901215 69 0.016
regulation of cell migration GO:0030334 128 0.016
regulation of secretion GO:0051046 224 0.015
positive regulation of signal transduction GO:0009967 175 0.015
actin polymerization or depolymerization GO:0008154 14 0.015
embryonic appendage morphogenesis GO:0035113 4 0.015
dendrite development GO:0016358 72 0.015
cellular response to oxygen containing compound GO:1901701 386 0.015
Human
regulation of exocytosis GO:0017157 37 0.015
protein catabolic process GO:0030163 30 0.015
purine ribonucleotide metabolic process GO:0009150 227 0.015
mapk cascade GO:0000165 140 0.015
cell cycle phase transition GO:0044770 21 0.015
positive regulation of cytoskeleton organization GO:0051495 26 0.015
olfactory behavior GO:0042048 2 0.015
tissue development GO:0009888 252 0.014
regulation of hydrolase activity GO:0051336 143 0.014
actin filament polymerization GO:0030041 11 0.014
actin cytoskeleton organization GO:0030036 73 0.014
hormone transport GO:0009914 121 0.014
positive regulation of response to stimulus GO:0048584 285 0.014
metal ion transport GO:0030001 289 0.014
response to toxic substance GO:0009636 133 0.014
negative regulation of multicellular organismal process GO:0051241 203 0.014
regulation of necroptotic process GO:0060544 2 0.014
single organism organelle organization GO:1902589 180 0.014
negative regulation of rna splicing GO:0033119 3 0.014
peptidyl amino acid modification GO:0018193 126 0.014
organic acid transport GO:0015849 116 0.014
positive regulation of transferase activity GO:0051347 81 0.014
negative regulation of cell cycle phase transition GO:1901988 4 0.014
carboxylic acid transport GO:0046942 115 0.014
regulation of transmembrane transport GO:0034762 122 0.014
negative regulation of cell communication GO:0010648 158 0.014
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.014
positive regulation of transcription factor import into nucleus GO:0042993 4 0.014
organ morphogenesis GO:0009887 75 0.014
nucleobase containing small molecule metabolic process GO:0055086 316 0.014
regulation of intracellular transport GO:0032386 65 0.014
circadian rhythm GO:0007623 88 0.014
regulation of transferase activity GO:0051338 123 0.014
positive regulation of nucleic acid templated transcription GO:1903508 197 0.014
positive regulation of gene expression GO:0010628 244 0.013
positive regulation of nervous system development GO:0051962 178 0.013
protein ubiquitination involved in ubiquitin dependent protein catabolic process GO:0042787 3 0.013
gonad development GO:0008406 104 0.013
embryonic pattern specification GO:0009880 1 0.013
peptidyl tyrosine modification GO:0018212 72 0.013
positive regulation of rna metabolic process GO:0051254 203 0.013
positive regulation of cell differentiation GO:0045597 217 0.013
cellular protein complex assembly GO:0043623 44 0.013
ribose phosphate metabolic process GO:0019693 235 0.013
cellular homeostasis GO:0019725 252 0.013
telencephalon development GO:0021537 62 0.013
maternal process involved in female pregnancy GO:0060135 38 0.013
positive regulation of cell development GO:0010720 176 0.013
protein localization to plasma membrane GO:0072659 15 0.013
organic anion transport GO:0015711 132 0.013
regulation of ion transmembrane transport GO:0034765 121 0.013
dna metabolic process GO:0006259 96 0.013
circulatory system process GO:0003013 183 0.013
regulation of system process GO:0044057 208 0.013
cognition GO:0050890 92 0.013
positive regulation of cell communication GO:0010647 271 0.013
cytokinetic process GO:0032506 1 0.013
regulation of cell cycle g2 m phase transition GO:1902749 4 0.012
regulation of cell motility GO:2000145 131 0.012
gtp metabolic process GO:0046039 72 0.012
negative regulation of programmed cell death GO:0043069 183 0.012
regulation of amine transport GO:0051952 54 0.012
regulation of anatomical structure morphogenesis GO:0022603 141 0.012
negative regulation of signaling GO:0023057 157 0.012
regulation of metal ion transport GO:0010959 118 0.012
striated muscle contraction GO:0006941 44 0.012
response to alkaloid GO:0043279 132 0.012
regulation of cellular component movement GO:0051270 150 0.012
negative regulation of transport GO:0051051 136 0.012
monoamine transport GO:0015844 43 0.012
embryo development GO:0009790 49 0.012
rna localization GO:0006403 4 0.012
purine ribonucleoside metabolic process GO:0046128 168 0.012
chromosome organization GO:0051276 36 0.012
positive regulation of rna biosynthetic process GO:1902680 197 0.012
cellular cation homeostasis GO:0030003 180 0.012
cellular response to oxidative stress GO:0034599 76 0.012
somatic stem cell division GO:0048103 2 0.012
sensory perception of pain GO:0019233 73 0.012
response to cytokine GO:0034097 215 0.012
inflammatory response GO:0006954 150 0.011
vesicle organization GO:0016050 29 0.011
negative regulation of stress activated protein kinase signaling cascade GO:0070303 4 0.011
cellular response to abiotic stimulus GO:0071214 85 0.011
cell activation GO:0001775 97 0.011
protein heterooligomerization GO:0051291 89 0.011
negative regulation of cell death GO:0060548 229 0.011
axon development GO:0061564 96 0.011
response to wounding GO:0009611 254 0.011
odontogenesis GO:0042476 32 0.011
cell substrate adhesion GO:0031589 29 0.011
synapse organization GO:0050808 46 0.011
actin filament organization GO:0007015 42 0.011
mrna metabolic process GO:0016071 20 0.011
sensory organ development GO:0007423 74 0.011
regulation of actin filament length GO:0030832 12 0.011
positive regulation of cell projection organization GO:0031346 111 0.011
positive regulation of secretion GO:0051047 140 0.011
monocarboxylic acid transport GO:0015718 52 0.011
cellular response to starvation GO:0009267 27 0.011
response to monosaccharide GO:0034284 159 0.011
cellular carbohydrate metabolic process GO:0044262 72 0.011
meiotic cell cycle process GO:1903046 3 0.011
immune system process GO:0002376 204 0.011
regulation of dendritic spine development GO:0060998 16 0.011
purine nucleotide catabolic process GO:0006195 136 0.011
fertilization GO:0009566 3 0.011
male gamete generation GO:0048232 99 0.011
cell projection morphogenesis GO:0048858 123 0.011
regulation of signal transduction GO:0009966 318 0.011
regulation of hormone levels GO:0010817 187 0.011
regulation of cellular component size GO:0032535 51 0.011
cell morphogenesis involved in differentiation GO:0000904 119 0.011
regulation of nucleotide metabolic process GO:0006140 117 0.011
glycosyl compound catabolic process GO:1901658 126 0.011
regulation of kinase activity GO:0043549 117 0.011
intracellular protein transport GO:0006886 79 0.011
negative regulation of macromolecule metabolic process GO:0010605 260 0.011
action potential GO:0001508 54 0.011
response to carbohydrate GO:0009743 183 0.011
regulation of neuron death GO:1901214 115 0.011
lipid metabolic process GO:0006629 283 0.011
purine nucleoside catabolic process GO:0006152 124 0.010
regulation of protein kinase activity GO:0045859 105 0.010
regulation of response to wounding GO:1903034 69 0.010
fibroblast growth factor receptor signaling pathway GO:0008543 8 0.010
lymphocyte activation GO:0046649 43 0.010
negative regulation of protein metabolic process GO:0051248 114 0.010
protein complex biogenesis GO:0070271 263 0.010
protein targeting to plasma membrane GO:0072661 4 0.010
cardiovascular system development GO:0072358 134 0.010
epithelium development GO:0060429 96 0.010
transmission of nerve impulse GO:0019226 42 0.010
gamete generation GO:0007276 124 0.010
response to peptide hormone GO:0043434 278 0.010
Human
membrane fusion GO:0061025 26 0.010
positive regulation of reactive oxygen species metabolic process GO:2000379 16 0.010
single organism carbohydrate metabolic process GO:0044723 118 0.010
defense response GO:0006952 194 0.010
response to osmotic stress GO:0006970 42 0.010
cell cell signaling involved in cell fate commitment GO:0045168 2 0.010

Usf1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.076
musculoskeletal system disease DOID:17 0 0.076
muscular disease DOID:0080000 0 0.043
muscle tissue disease DOID:66 0 0.043
myopathy DOID:423 0 0.032
nervous system disease DOID:863 0 0.019
connective tissue disease DOID:65 0 0.013