Caenorhabditis elegans

56 known processes

lim-4 (CELE_ZC64.4)

Protein LIM-4

lim-4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
organelle organization GO:0006996 783 0.181
locomotion GO:0040011 1634 0.136
Mouse Worm
cell development GO:0048468 696 0.131
Mouse Worm
embryo development GO:0009790 3052 0.130
cell migration GO:0016477 306 0.117
Mouse Worm
cell part morphogenesis GO:0032990 152 0.116
Worm
cell projection morphogenesis GO:0048858 148 0.104
Worm
cellular component morphogenesis GO:0032989 318 0.103
Worm
single organism organelle organization GO:1902589 501 0.103
embryo development ending in birth or egg hatching GO:0009792 2992 0.101
death GO:0016265 547 0.094
cell death GO:0008219 547 0.091
regulation of developmental process GO:0050793 684 0.089
Worm
single organism reproductive process GO:0044702 1196 0.085
Mouse Worm
regulation of biological quality GO:0065008 741 0.084
apoptotic process GO:0006915 478 0.083
programmed cell death GO:0012501 500 0.083
post embryonic development GO:0009791 2152 0.077
Worm
regulation of primary metabolic process GO:0080090 292 0.076
protein metabolic process GO:0019538 422 0.073
cellular component assembly GO:0022607 293 0.072
endocytosis GO:0006897 819 0.071
macromolecule localization GO:0033036 771 0.071
gamete generation GO:0007276 461 0.070
multicellular organismal aging GO:0010259 812 0.068
regulation of multicellular organismal process GO:0051239 726 0.068
Worm
maintenance of location GO:0051235 580 0.067
localization of cell GO:0051674 313 0.067
Mouse Worm
cellular component biogenesis GO:0044085 297 0.066
cell projection organization GO:0030030 231 0.066
Worm
lipid storage GO:0019915 565 0.066
single organism signaling GO:0044700 401 0.066
Worm
generation of neurons GO:0048699 235 0.063
Mouse Worm
muscle cell differentiation GO:0042692 171 0.063
lipid localization GO:0010876 573 0.063
developmental process involved in reproduction GO:0003006 1165 0.062
Mouse Worm
cytoskeleton organization GO:0007010 339 0.062
cell motility GO:0048870 313 0.062
Mouse Worm
synaptic target recognition GO:0008039 3 0.060
regulation of metabolic process GO:0019222 478 0.060
body morphogenesis GO:0010171 620 0.059
Worm
actin filament based process GO:0030029 191 0.058
determination of adult lifespan GO:0008340 812 0.058
organelle assembly GO:0070925 214 0.058
aging GO:0007568 812 0.058
multicellular organismal reproductive process GO:0048609 815 0.057
Worm
sex differentiation GO:0007548 909 0.057
Mouse Worm
gonad development GO:0008406 840 0.057
Mouse Worm
signal transduction GO:0007165 317 0.057
Worm
establishment of localization GO:0051234 1171 0.057
head development GO:0060322 1 0.055
Mouse Worm
development of primary sexual characteristics GO:0045137 840 0.055
Mouse Worm
behavior GO:0007610 527 0.053
Mouse Worm
regulation of gene expression GO:0010468 366 0.053
transport GO:0006810 1093 0.050
sexual reproduction GO:0019953 546 0.050
macromolecular complex assembly GO:0065003 193 0.048
organ development GO:0048513 1102 0.048
Mouse Worm Fly
receptor mediated endocytosis GO:0006898 715 0.048
vesicle mediated transport GO:0016192 852 0.048
nervous system development GO:0007399 253 0.048
Mouse Worm
multi organism reproductive behavior GO:0044705 387 0.047
Worm
neurogenesis GO:0022008 236 0.047
Mouse Worm
signaling GO:0023052 401 0.047
Worm
multi organism reproductive process GO:0044703 867 0.046
Worm
macromolecular complex subunit organization GO:0043933 320 0.046
germ cell development GO:0007281 351 0.046
regulation of macromolecule metabolic process GO:0060255 421 0.046
cellular component assembly involved in morphogenesis GO:0010927 183 0.044
positive regulation of cellular process GO:0048522 332 0.044
Worm
cell morphogenesis GO:0000902 163 0.044
Worm
cellular component movement GO:0006928 388 0.044
Mouse Worm
multicellular organismal reproductive behavior GO:0033057 384 0.044
Worm
cell fate commitment GO:0045165 139 0.044
protein complex subunit organization GO:0071822 280 0.043
cell cycle process GO:0022402 482 0.043
single organism localization GO:1902578 518 0.042
multicellular organism growth GO:0035264 385 0.042
cellular biosynthetic process GO:0044249 315 0.042
cellular macromolecular complex assembly GO:0034622 184 0.042
cellular protein complex assembly GO:0043623 178 0.042
establishment of localization in cell GO:0051649 318 0.040
developmental growth GO:0048589 412 0.040
nucleobase containing compound metabolic process GO:0006139 406 0.040
positive regulation of growth GO:0045927 369 0.039
positive regulation of developmental growth GO:0048639 354 0.039
anatomical structure formation involved in morphogenesis GO:0048646 250 0.039
negative regulation of biological process GO:0048519 567 0.039
Worm
taxis GO:0042330 128 0.039
Worm
gene expression GO:0010467 412 0.038
reproductive system development GO:0061458 850 0.038
Mouse Worm
protein complex assembly GO:0006461 186 0.038
myofibril assembly GO:0030239 154 0.038
regulation of multicellular organism growth GO:0040014 373 0.038
cell recognition GO:0008037 85 0.037
Worm
catabolic process GO:0009056 318 0.037
negative regulation of metabolic process GO:0009892 240 0.037
single organism transport GO:0044765 447 0.036
positive regulation of developmental process GO:0051094 408 0.036
Worm
neuron differentiation GO:0030182 217 0.036
Mouse Worm
growth GO:0040007 562 0.035
macromolecule catabolic process GO:0009057 202 0.035
meiotic nuclear division GO:0007126 300 0.035
protein complex biogenesis GO:0070271 186 0.035
axon development GO:0061564 163 0.035
Worm
actin cytoskeleton organization GO:0030036 184 0.035
meiotic cell cycle GO:0051321 335 0.035
organic substance catabolic process GO:1901575 294 0.035
muscle cell development GO:0055001 158 0.034
regulation of growth GO:0040008 409 0.034
positive regulation of multicellular organism growth GO:0040018 352 0.034
system process GO:0003008 136 0.034
Mouse Worm
cellular protein metabolic process GO:0044267 279 0.034
reproductive behavior GO:0019098 387 0.033
Worm
regulation of developmental growth GO:0048638 389 0.033
neuron recognition GO:0008038 83 0.033
Worm
reproductive structure development GO:0048608 850 0.033
Mouse Worm
organic substance biosynthetic process GO:1901576 323 0.032
multicellular organism reproduction GO:0032504 819 0.032
Worm
multi multicellular organism process GO:0044706 390 0.032
Worm
neuron development GO:0048666 199 0.032
Mouse Worm
negative regulation of cellular process GO:0048523 239 0.032
Worm
muscle structure development GO:0061061 191 0.032
macromolecule biosynthetic process GO:0009059 250 0.032
striated muscle cell development GO:0055002 157 0.032
multi organism behavior GO:0051705 389 0.031
Worm
cell cycle GO:0007049 526 0.031
negative regulation of macromolecule metabolic process GO:0010605 229 0.030
positive regulation of multicellular organismal process GO:0051240 417 0.030
Worm
cell division GO:0051301 262 0.029
protein catabolic process GO:0030163 162 0.029
cellular localization GO:0051641 360 0.029
cellular process involved in reproduction in multicellular organism GO:0022412 351 0.029
genitalia development GO:0048806 741 0.029
regulation of multicellular organismal development GO:2000026 317 0.029
Worm
organelle fission GO:0048285 363 0.029
post embryonic organ development GO:0048569 336 0.029
Worm
female gamete generation GO:0007292 254 0.029
regulation of cell communication GO:0010646 176 0.028
Worm
striated muscle myosin thick filament assembly GO:0071688 138 0.028
actomyosin structure organization GO:0031032 154 0.028
heterocycle biosynthetic process GO:0018130 187 0.028
myosin filament assembly GO:0031034 138 0.027
vulval development GO:0040025 333 0.027
Worm
negative regulation of gene expression GO:0010629 217 0.027
neuron projection development GO:0031175 187 0.027
Worm
phosphate containing compound metabolic process GO:0006796 232 0.026
regulation of nitrogen compound metabolic process GO:0051171 222 0.026
organic cyclic compound biosynthetic process GO:1901362 195 0.026
hermaphrodite genitalia development GO:0040035 734 0.026
cell morphogenesis involved in neuron differentiation GO:0048667 111 0.026
Worm
cell surface receptor signaling pathway GO:0007166 149 0.026
nucleic acid metabolic process GO:0090304 299 0.026
embryonic morphogenesis GO:0048598 152 0.026
response to wounding GO:0009611 4 0.025
regulation of cellular metabolic process GO:0031323 305 0.025
biosynthetic process GO:0009058 323 0.025
positive regulation of cellular metabolic process GO:0031325 178 0.025
Worm
response to chemical GO:0042221 356 0.024
Worm
neuron projection morphogenesis GO:0048812 114 0.024
Worm
positive regulation of nitrogen compound metabolic process GO:0051173 134 0.023
Worm
muscle tissue development GO:0060537 1 0.023
canonical wnt signaling pathway GO:0060070 3 0.023
rna biosynthetic process GO:0032774 169 0.023
regulation of post embryonic development GO:0048580 260 0.023
Worm
macromolecule modification GO:0043412 218 0.023
myosin filament organization GO:0031033 138 0.023
oviposition GO:0018991 364 0.023
Worm
chemotaxis GO:0006935 120 0.023
regulation of cellular component organization GO:0051128 248 0.023
oogenesis GO:0048477 229 0.022
cell type specific apoptotic process GO:0097285 4 0.022
regulation of nucleobase containing compound metabolic process GO:0019219 222 0.022
small molecule metabolic process GO:0044281 186 0.022
Worm
neuroblast fate determination GO:0007400 1 0.022
regulation of nucleic acid templated transcription GO:1903506 165 0.021
striated muscle cell differentiation GO:0051146 158 0.021
organonitrogen compound metabolic process GO:1901564 151 0.021
Worm
rna metabolic process GO:0016070 228 0.021
sensory organ morphogenesis GO:0090596 2 0.021
nucleic acid templated transcription GO:0097659 169 0.021
regulation of meiotic cell cycle GO:0051445 136 0.021
cellular protein modification process GO:0006464 207 0.021
regulation of nematode larval development GO:0061062 260 0.021
Worm
phosphorus metabolic process GO:0006793 232 0.020
regulation of rna metabolic process GO:0051252 173 0.020
regulation of localization GO:0032879 194 0.019
Worm
nucleobase containing compound biosynthetic process GO:0034654 184 0.019
cellular nitrogen compound biosynthetic process GO:0044271 192 0.019
negative regulation of developmental process GO:0051093 227 0.019
regulation of meiosis GO:0040020 94 0.019
aromatic compound biosynthetic process GO:0019438 192 0.019
negative regulation of cellular macromolecule biosynthetic process GO:2000113 65 0.019
membrane organization GO:0061024 135 0.019
embryonic body morphogenesis GO:0010172 49 0.019
negative regulation of multicellular organismal process GO:0051241 236 0.018
regulation of cell cycle GO:0051726 194 0.018
response to organic substance GO:0010033 131 0.018
cell proliferation GO:0008283 116 0.018
response to abiotic stimulus GO:0009628 152 0.018
Worm
regulation of cell division GO:0051302 142 0.018
regulation of cell migration GO:0030334 55 0.018
Worm
positive regulation of metabolic process GO:0009893 187 0.018
Worm
positive regulation of neuron differentiation GO:0045666 4 0.018
phagocytosis GO:0006909 115 0.018
regulation of transcription from rna polymerase ii promoter GO:0006357 145 0.018
Worm
inductive cell migration GO:0040039 145 0.018
negative regulation of neurogenesis GO:0050768 4 0.018
regulation of cellular biosynthetic process GO:0031326 189 0.017
axon guidance GO:0007411 82 0.017
immune response GO:0006955 192 0.017
protein modification process GO:0036211 207 0.017
regulation of cation channel activity GO:2001257 3 0.016
regeneration GO:0031099 4 0.016
negative regulation of cellular metabolic process GO:0031324 95 0.016
oxoacid metabolic process GO:0043436 47 0.016
Worm
molting cycle collagen and cuticulin based cuticle GO:0018996 281 0.016
muscle organ morphogenesis GO:0048644 4 0.016
defense response GO:0006952 296 0.016
apoptotic cell clearance GO:0043277 111 0.016
neuron projection guidance GO:0097485 82 0.016
regulation of neuron projection development GO:0010975 31 0.016
transcription from rna polymerase ii promoter GO:0006366 149 0.016
Worm
ribonucleoprotein complex assembly GO:0022618 4 0.015
regulation of signal transduction GO:0009966 135 0.015
Worm
axonogenesis GO:0007409 102 0.015
Worm
cell morphogenesis involved in differentiation GO:0000904 112 0.015
Worm
molting cycle GO:0042303 281 0.015
regulation of cytoplasmic transport GO:1903649 3 0.015
regulation of cell morphogenesis GO:0022604 40 0.015
cellular macromolecule biosynthetic process GO:0034645 247 0.015
axonal fasciculation GO:0007413 79 0.015
Worm
nonmotile primary cilium assembly GO:0035058 18 0.015
posttranscriptional regulation of gene expression GO:0010608 166 0.015
positive regulation of macromolecule metabolic process GO:0010604 149 0.014
Worm
carboxylic acid metabolic process GO:0019752 34 0.014
Worm
protein localization GO:0008104 205 0.014
positive regulation of neurogenesis GO:0050769 4 0.014
phagocytosis engulfment GO:0006911 98 0.014
intracellular signal transduction GO:0035556 96 0.014
regulation of organ morphogenesis GO:2000027 4 0.014
rna localization GO:0006403 3 0.014
regulation of organelle organization GO:0033043 164 0.014
regulation of cellular component size GO:0032535 40 0.014
tube development GO:0035295 126 0.014
Worm
response to acid chemical GO:0001101 4 0.014
regulation of cellular ketone metabolic process GO:0010565 3 0.014
neuromuscular junction development GO:0007528 2 0.014
response to external stimulus GO:0009605 289 0.014
Worm
regulation of apoptotic signaling pathway GO:2001233 1 0.014
membrane invagination GO:0010324 98 0.014
positive regulation of gene expression GO:0010628 112 0.014
Worm
carbohydrate derivative metabolic process GO:1901135 141 0.014
regulation of vulval development GO:0040028 248 0.014
Worm
regulation of cellular macromolecule biosynthetic process GO:2000112 188 0.014
posttranscriptional gene silencing by rna GO:0035194 143 0.014
regulation of biosynthetic process GO:0009889 189 0.014
epithelium development GO:0060429 68 0.014
regulation of nucleocytoplasmic transport GO:0046822 3 0.014
regulation of transcription dna templated GO:0006355 164 0.013
positive regulation of macromolecule biosynthetic process GO:0010557 109 0.013
Worm
transcription dna templated GO:0006351 168 0.013
response to other organism GO:0051707 101 0.013
gene silencing by rna GO:0031047 143 0.013
epithelial tube morphogenesis GO:0060562 1 0.013
regulation of gene expression epigenetic GO:0040029 163 0.013
negative regulation of post embryonic development GO:0048581 208 0.013
cellular amino acid metabolic process GO:0006520 15 0.013
Worm
cellular response to organic substance GO:0071310 119 0.013
regulation of cell proliferation GO:0042127 105 0.013
protein oligomerization GO:0051259 4 0.013
rna interference GO:0016246 137 0.013
organic acid metabolic process GO:0006082 47 0.013
Worm
regulation of axonogenesis GO:0050770 24 0.013
positive regulation of transcription dna templated GO:0045893 102 0.013
Worm
engulfment of apoptotic cell GO:0043652 94 0.013
microtubule based process GO:0007017 182 0.013
gene silencing GO:0016458 143 0.013
posttranscriptional gene silencing GO:0016441 143 0.013
skeletal muscle organ development GO:0060538 3 0.013
regulation of reproductive process GO:2000241 66 0.013
adult behavior GO:0030534 3 0.012
regulation of rna biosynthetic process GO:2001141 165 0.012
tissue development GO:0009888 112 0.012
regulation of cellular amine metabolic process GO:0033238 0 0.012
regulation of macromolecule biosynthetic process GO:0010556 189 0.012
dauer larval development GO:0040024 92 0.012
Worm
regulation of cell cycle process GO:0010564 145 0.012
positive regulation of nucleic acid templated transcription GO:1903508 102 0.012
Worm
regulation of signaling GO:0023051 172 0.012
Worm
amine metabolic process GO:0009308 15 0.012
cellular amine metabolic process GO:0044106 15 0.012
regulation of sequence specific dna binding transcription factor activity GO:0051090 3 0.012
negative regulation of nitrogen compound metabolic process GO:0051172 63 0.012
single organism biosynthetic process GO:0044711 91 0.012
Worm
positive regulation of cell morphogenesis involved in differentiation GO:0010770 4 0.011
intraciliary transport GO:0042073 12 0.011
memory GO:0007613 3 0.011
positive regulation of cell projection organization GO:0031346 4 0.011
regulation of cellular amino acid metabolic process GO:0006521 0 0.011
negative regulation of biosynthetic process GO:0009890 65 0.011
cellular catabolic process GO:0044248 199 0.011
nucleobase containing small molecule metabolic process GO:0055086 115 0.011
positive regulation of intracellular transport GO:0032388 2 0.011
organonitrogen compound biosynthetic process GO:1901566 44 0.011
Worm
regulation of anatomical structure size GO:0090066 46 0.011
cellular response to abiotic stimulus GO:0071214 4 0.011
development of primary male sexual characteristics GO:0046546 4 0.011
positive regulation of nucleobase containing compound metabolic process GO:0045935 134 0.011
Worm
regulation of multi organism process GO:0043900 69 0.011
phosphorylation GO:0016310 116 0.011
organophosphate metabolic process GO:0019637 125 0.011
male sex differentiation GO:0046661 86 0.011
cellular response to chemical stimulus GO:0070887 129 0.011
positive regulation of biosynthetic process GO:0009891 109 0.011
Worm
pigmentation GO:0043473 2 0.011
negative regulation of nematode larval development GO:0061064 208 0.011
response to temperature stimulus GO:0009266 66 0.011
Worm
regulation of behavior GO:0050795 97 0.011
small gtpase mediated signal transduction GO:0007264 32 0.011
regulation of cell projection assembly GO:0060491 3 0.011
positive regulation of protein transport GO:0051222 4 0.011
synaptic growth at neuromuscular junction GO:0051124 1 0.011
positive regulation of rna metabolic process GO:0051254 103 0.011
Worm
cell cell signaling GO:0007267 118 0.011
secretion by cell GO:0032940 138 0.010
cellular response to stress GO:0033554 162 0.010
regulation of protein targeting GO:1903533 3 0.010
regulation of cell morphogenesis involved in differentiation GO:0010769 29 0.010
regulation of response to stimulus GO:0048583 243 0.010
Worm
regulation of lipid metabolic process GO:0019216 4 0.010
cilium organization GO:0044782 32 0.010
nucleobase containing compound catabolic process GO:0034655 114 0.010
mating GO:0007618 34 0.010
cilium morphogenesis GO:0060271 33 0.010
negative regulation of vulval development GO:0040027 206 0.010
adult locomotory behavior GO:0008344 1 0.010
neuroblast fate commitment GO:0014017 5 0.010
regulation of protein import into nucleus GO:0042306 3 0.010
regulation of cell death GO:0010941 65 0.010

lim-4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in worm and predicted with the worm functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.022
nervous system disease DOID:863 0 0.013