Caenorhabditis elegans

5 known processes

atm-1 (CELE_Y48G1BL.2)

Protein ATM-1

atm-1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
embryo development GO:0009790 3052 0.247
Worm
embryo development ending in birth or egg hatching GO:0009792 2992 0.173
Worm
post embryonic development GO:0009791 2152 0.108
Worm
reproductive structure development GO:0048608 850 0.093
locomotion GO:0040011 1634 0.093
Worm
gonad development GO:0008406 840 0.088
establishment of localization GO:0051234 1171 0.085
Worm
developmental process involved in reproduction GO:0003006 1165 0.085
organ development GO:0048513 1102 0.082
single organism reproductive process GO:0044702 1196 0.080
hermaphrodite genitalia development GO:0040035 734 0.077
endocytosis GO:0006897 819 0.076
Worm
development of primary sexual characteristics GO:0045137 840 0.076
macromolecule localization GO:0033036 771 0.076
Worm
regulation of multicellular organismal process GO:0051239 726 0.076
regulation of biological quality GO:0065008 741 0.075
Worm
multicellular organismal aging GO:0010259 812 0.075
Worm
transport GO:0006810 1093 0.074
Worm
reproductive system development GO:0061458 850 0.071
receptor mediated endocytosis GO:0006898 715 0.071
multi organism reproductive process GO:0044703 867 0.069
regulation of developmental process GO:0050793 684 0.067
negative regulation of biological process GO:0048519 567 0.066
genitalia development GO:0048806 741 0.065
maintenance of location GO:0051235 580 0.064
Worm
lipid storage GO:0019915 565 0.062
Worm
multicellular organism reproduction GO:0032504 819 0.060
sex differentiation GO:0007548 909 0.059
lipid localization GO:0010876 573 0.058
Worm
determination of adult lifespan GO:0008340 812 0.058
Worm
aging GO:0007568 812 0.058
Worm
organelle organization GO:0006996 783 0.054
Worm
growth GO:0040007 562 0.053
behavior GO:0007610 527 0.052
Worm
vesicle mediated transport GO:0016192 852 0.052
Worm
sexual reproduction GO:0019953 546 0.052
multicellular organismal reproductive process GO:0048609 815 0.051
cell development GO:0048468 696 0.051
positive regulation of developmental process GO:0051094 408 0.048
regulation of growth GO:0040008 409 0.047
regulation of metabolic process GO:0019222 478 0.045
programmed cell death GO:0012501 500 0.044
cell cycle GO:0007049 526 0.044
response to chemical GO:0042221 356 0.043
Worm
single organism localization GO:1902578 518 0.043
Worm
regulation of macromolecule metabolic process GO:0060255 421 0.042
gene expression GO:0010467 412 0.042
protein metabolic process GO:0019538 422 0.041
apoptotic process GO:0006915 478 0.040
single organism transport GO:0044765 447 0.040
Worm
gamete generation GO:0007276 461 0.039
germ cell development GO:0007281 351 0.039
body morphogenesis GO:0010171 620 0.038
positive regulation of multicellular organismal process GO:0051240 417 0.038
cellular component movement GO:0006928 388 0.037
cellular process involved in reproduction in multicellular organism GO:0022412 351 0.037
regulation of developmental growth GO:0048638 389 0.037
multi organism behavior GO:0051705 389 0.035
signaling GO:0023052 401 0.035
multi organism reproductive behavior GO:0044705 387 0.035
developmental growth GO:0048589 412 0.035
death GO:0016265 547 0.035
multi multicellular organism process GO:0044706 390 0.034
positive regulation of developmental growth GO:0048639 354 0.034
regulation of multicellular organism growth GO:0040014 373 0.034
reproductive behavior GO:0019098 387 0.033
single organism signaling GO:0044700 401 0.033
positive regulation of growth GO:0045927 369 0.033
cellular biosynthetic process GO:0044249 315 0.033
Worm
oviposition GO:0018991 364 0.033
nucleobase containing compound metabolic process GO:0006139 406 0.031
positive regulation of multicellular organism growth GO:0040018 352 0.031
female gamete generation GO:0007292 254 0.031
cell death GO:0008219 547 0.031
organelle fission GO:0048285 363 0.031
organic substance biosynthetic process GO:1901576 323 0.030
Worm
regulation of primary metabolic process GO:0080090 292 0.030
macromolecule biosynthetic process GO:0009059 250 0.029
cellular protein metabolic process GO:0044267 279 0.029
signal transduction GO:0007165 317 0.029
multicellular organism growth GO:0035264 385 0.028
multicellular organismal reproductive behavior GO:0033057 384 0.028
regulation of cellular metabolic process GO:0031323 305 0.027
anatomical structure formation involved in morphogenesis GO:0048646 250 0.027
oogenesis GO:0048477 229 0.027
molting cycle collagen and cuticulin based cuticle GO:0018996 281 0.027
localization of cell GO:0051674 313 0.027
cellular localization GO:0051641 360 0.026
macromolecule modification GO:0043412 218 0.026
single organism organelle organization GO:1902589 501 0.026
cellular component morphogenesis GO:0032989 318 0.026
cellular macromolecule biosynthetic process GO:0034645 247 0.025
cellular protein modification process GO:0006464 207 0.025
regulation of gene expression GO:0010468 366 0.025
biosynthetic process GO:0009058 323 0.025
Worm
negative regulation of metabolic process GO:0009892 240 0.024
regulation of locomotion GO:0040012 161 0.024
Worm
nervous system development GO:0007399 253 0.024
cell cycle process GO:0022402 482 0.024
establishment of localization in cell GO:0051649 318 0.024
negative regulation of macromolecule metabolic process GO:0010605 229 0.024
head development GO:0060322 1 0.023
negative regulation of cellular process GO:0048523 239 0.023
regulation of cellular component organization GO:0051128 248 0.023
Worm
negative regulation of gene expression GO:0010629 217 0.023
cell migration GO:0016477 306 0.023
post embryonic organ development GO:0048569 336 0.023
nucleic acid metabolic process GO:0090304 299 0.023
response to external stimulus GO:0009605 289 0.023
Worm
muscle tissue development GO:0060537 1 0.023
molting cycle GO:0042303 281 0.023
protein modification process GO:0036211 207 0.023
cellular component biogenesis GO:0044085 297 0.023
regulation of multicellular organismal development GO:2000026 317 0.022
regulation of macromolecule biosynthetic process GO:0010556 189 0.021
cytoskeleton organization GO:0007010 339 0.021
positive regulation of cellular metabolic process GO:0031325 178 0.021
vulval development GO:0040025 333 0.021
cell division GO:0051301 262 0.021
regulation of cytoplasmic transport GO:1903649 3 0.021
epithelial tube morphogenesis GO:0060562 1 0.020
positive regulation of cellular process GO:0048522 332 0.020
Worm
macromolecular complex subunit organization GO:0043933 320 0.020
response to wounding GO:0009611 4 0.020
negative regulation of multicellular organismal process GO:0051241 236 0.020
catabolic process GO:0009056 318 0.020
rna metabolic process GO:0016070 228 0.020
phosphate containing compound metabolic process GO:0006796 232 0.020
Worm
meiotic nuclear division GO:0007126 300 0.019
regulation of sequence specific dna binding transcription factor activity GO:0051090 3 0.019
cell motility GO:0048870 313 0.019
regulation of organelle organization GO:0033043 164 0.019
defense response GO:0006952 296 0.019
protein complex subunit organization GO:0071822 280 0.019
posttranscriptional regulation of gene expression GO:0010608 166 0.019
meiotic cell cycle GO:0051321 335 0.019
macromolecular complex assembly GO:0065003 193 0.019
gene silencing by rna GO:0031047 143 0.019
negative regulation of developmental process GO:0051093 227 0.019
skeletal muscle organ development GO:0060538 3 0.019
cellular component assembly GO:0022607 293 0.018
regulation of cell cycle GO:0051726 194 0.018
system process GO:0003008 136 0.018
Worm
posttranscriptional gene silencing GO:0016441 143 0.018
cellular macromolecular complex assembly GO:0034622 184 0.018
cellular protein complex assembly GO:0043623 178 0.018
phosphorus metabolic process GO:0006793 232 0.018
Worm
small molecule metabolic process GO:0044281 186 0.018
regulation of cell division GO:0051302 142 0.018
regulation of signaling GO:0023051 172 0.017
protein complex biogenesis GO:0070271 186 0.017
protein complex assembly GO:0006461 186 0.017
regulation of cellular ketone metabolic process GO:0010565 3 0.017
gene silencing GO:0016458 143 0.017
cell projection organization GO:0030030 231 0.017
macromolecule catabolic process GO:0009057 202 0.017
muscle structure development GO:0061061 191 0.017
posttranscriptional gene silencing by rna GO:0035194 143 0.016
transcription dna templated GO:0006351 168 0.016
regulation of gene expression epigenetic GO:0040029 163 0.016
actin filament based process GO:0030029 191 0.016
cellular nitrogen compound biosynthetic process GO:0044271 192 0.016
muscle cell development GO:0055001 158 0.016
regulation of vulval development GO:0040028 248 0.016
striated muscle cell development GO:0055002 157 0.016
intracellular signal transduction GO:0035556 96 0.016
regulation of apoptotic signaling pathway GO:2001233 1 0.016
organonitrogen compound metabolic process GO:1901564 151 0.016
actomyosin structure organization GO:0031032 154 0.016
neurogenesis GO:0022008 236 0.016
generation of neurons GO:0048699 235 0.016
regulation of cellular amino acid metabolic process GO:0006521 0 0.016
memory GO:0007613 3 0.016
nucleic acid templated transcription GO:0097659 169 0.016
regulation of localization GO:0032879 194 0.016
Worm
striated muscle cell differentiation GO:0051146 158 0.016
regulation of cellular biosynthetic process GO:0031326 189 0.016
regulation of nucleocytoplasmic transport GO:0046822 3 0.016
rna interference GO:0016246 137 0.016
negative regulation of post embryonic development GO:0048581 208 0.016
cellular component assembly involved in morphogenesis GO:0010927 183 0.016
mitotic cell cycle process GO:1903047 194 0.016
regulation of nuclear division GO:0051783 115 0.016
nucleobase containing compound biosynthetic process GO:0034654 184 0.016
muscle cell differentiation GO:0042692 171 0.016
cellular response to stress GO:0033554 162 0.015
regulation of nucleobase containing compound metabolic process GO:0019219 222 0.015
regeneration GO:0031099 4 0.015
myosin filament assembly GO:0031034 138 0.015
regulation of cellular macromolecule biosynthetic process GO:2000112 188 0.015
regulation of nematode larval development GO:0061062 260 0.015
actin cytoskeleton organization GO:0030036 184 0.015
protein localization GO:0008104 205 0.015
adult behavior GO:0030534 3 0.015
regulation of cell cycle process GO:0010564 145 0.015
myosin filament organization GO:0031033 138 0.015
striated muscle myosin thick filament assembly GO:0071688 138 0.015
ribonucleoprotein complex assembly GO:0022618 4 0.015
myofibril assembly GO:0030239 154 0.015
organelle assembly GO:0070925 214 0.015
regulation of transcription dna templated GO:0006355 164 0.015
sensory organ morphogenesis GO:0090596 2 0.015
single organism behavior GO:0044708 83 0.015
Worm
regulation of post embryonic development GO:0048580 260 0.015
organic substance catabolic process GO:1901575 294 0.015
inductive cell migration GO:0040039 145 0.015
response to abiotic stimulus GO:0009628 152 0.015
oxoacid metabolic process GO:0043436 47 0.014
phosphorylation GO:0016310 116 0.014
regulation of meiotic cell cycle GO:0051445 136 0.014
regulation of cell communication GO:0010646 176 0.014
single organism catabolic process GO:0044712 129 0.014
organic acid metabolic process GO:0006082 47 0.014
secretion GO:0046903 147 0.014
aromatic compound biosynthetic process GO:0019438 192 0.014
transmembrane transport GO:0055085 110 0.014
apoptotic cell clearance GO:0043277 111 0.014
Worm
regulation of meiosis GO:0040020 94 0.014
regulation of response to stimulus GO:0048583 243 0.014
Worm
positive regulation of neurogenesis GO:0050769 4 0.014
regulation of nitrogen compound metabolic process GO:0051171 222 0.014
response to organic substance GO:0010033 131 0.014
heterocycle biosynthetic process GO:0018130 187 0.014
regulation of cellular amine metabolic process GO:0033238 0 0.014
cellular amine metabolic process GO:0044106 15 0.014
regulation of biosynthetic process GO:0009889 189 0.014
regulation of organ morphogenesis GO:2000027 4 0.014
negative regulation of vulval development GO:0040027 206 0.013
regulation of signal transduction GO:0009966 135 0.013
establishment or maintenance of cell polarity GO:0007163 63 0.013
rna localization GO:0006403 3 0.013
cell type specific apoptotic process GO:0097285 4 0.013
cellular response to chemical stimulus GO:0070887 129 0.013
negative regulation of nematode larval development GO:0061064 208 0.013
rna biosynthetic process GO:0032774 169 0.013
organelle localization GO:0051640 127 0.013
membrane organization GO:0061024 135 0.013
Worm
amine metabolic process GO:0009308 15 0.013
carboxylic acid metabolic process GO:0019752 34 0.013
positive regulation of neuron differentiation GO:0045666 4 0.013
cellular catabolic process GO:0044248 199 0.012
protein catabolic process GO:0030163 162 0.012
neuron development GO:0048666 199 0.012
transcription from rna polymerase ii promoter GO:0006366 149 0.012
regulation of response to wounding GO:1903034 1 0.012
organic cyclic compound biosynthetic process GO:1901362 195 0.012
neuron differentiation GO:0030182 217 0.012
positive regulation of cell morphogenesis involved in differentiation GO:0010770 4 0.012
phagocytosis GO:0006909 115 0.012
Worm
cellular amino acid metabolic process GO:0006520 15 0.012
cellular response to organic substance GO:0071310 119 0.012
dauer larval development GO:0040024 92 0.012
Worm
regulation of rna metabolic process GO:0051252 173 0.012
cell morphogenesis GO:0000902 163 0.012
neuron projection development GO:0031175 187 0.012
regulation of phosphate metabolic process GO:0019220 81 0.012
cellular response to abiotic stimulus GO:0071214 4 0.012
neuromuscular junction development GO:0007528 2 0.012
positive regulation of metabolic process GO:0009893 187 0.011
chromosome segregation GO:0007059 180 0.011
establishment of organelle localization GO:0051656 123 0.011
regulation of protein import into nucleus GO:0042306 3 0.011
positive regulation of nitrogen compound metabolic process GO:0051173 134 0.011
cell part morphogenesis GO:0032990 152 0.011
protein phosphorylation GO:0006468 85 0.011
negative regulation of neurogenesis GO:0050768 4 0.011
regulation of nucleic acid templated transcription GO:1903506 165 0.011
synaptic transmission GO:0007268 106 0.011
organic substance transport GO:0071702 113 0.011
positive regulation of cell projection organization GO:0031346 4 0.011
cell proliferation GO:0008283 116 0.011
axon development GO:0061564 163 0.011
regulation of protein targeting GO:1903533 3 0.011
carbohydrate derivative metabolic process GO:1901135 141 0.011
immune response GO:0006955 192 0.011
positive regulation of macromolecule metabolic process GO:0010604 149 0.011
cell surface receptor signaling pathway GO:0007166 149 0.011
cellular ketone metabolic process GO:0042180 14 0.011
membrane invagination GO:0010324 98 0.011
Worm
regulation of striated muscle contraction GO:0006942 4 0.011
engulfment of apoptotic cell GO:0043652 94 0.011
positive regulation of cell migration GO:0030335 3 0.011
establishment of spindle localization GO:0051293 51 0.010
regulation of rna biosynthetic process GO:2001141 165 0.010
negative regulation of cellular metabolic process GO:0031324 95 0.010
organophosphate metabolic process GO:0019637 125 0.010
Worm
phagocytosis engulfment GO:0006911 98 0.010
Worm
regulation of lipid metabolic process GO:0019216 4 0.010
regulation of protein metabolic process GO:0051246 81 0.010
regulation of cell proliferation GO:0042127 105 0.010
ribosome biogenesis GO:0042254 4 0.010
tube development GO:0035295 126 0.010
ion transmembrane transport GO:0034220 91 0.010
calcium mediated signaling GO:0019722 3 0.010
protein oligomerization GO:0051259 4 0.010
negative regulation of response to external stimulus GO:0032102 3 0.010
epithelial cell proliferation GO:0050673 1 0.010

atm-1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in worm and predicted with the worm functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.015
nervous system disease DOID:863 0 0.010