Saccharomyces cerevisiae

65 known processes

RPF1 (YHR088W)

Rpf1p

RPF1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
ribosome biogenesis GO:0042254 335 0.997
ribosomal large subunit biogenesis GO:0042273 98 0.923
rrna processing GO:0006364 227 0.898
maturation of lsu rrna GO:0000470 39 0.875
ribosomal large subunit assembly GO:0000027 35 0.823
maturation of lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000463 33 0.778
rrna metabolic process GO:0016072 244 0.732
cleavage involved in rrna processing GO:0000469 69 0.494
maturation of 5 8s rrna GO:0000460 80 0.465
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.390
ncrna processing GO:0034470 330 0.291
exonucleolytic trimming involved in rrna processing GO:0000459 19 0.154
nucleocytoplasmic transport GO:0006913 163 0.154
rna phosphodiester bond hydrolysis exonucleolytic GO:0090503 29 0.151
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.129
cellular macromolecule catabolic process GO:0044265 363 0.128
macromolecule catabolic process GO:0009057 383 0.126
rna phosphodiester bond hydrolysis GO:0090501 112 0.119
heterocycle catabolic process GO:0046700 494 0.112
nucleoside triphosphate catabolic process GO:0009143 329 0.111
rna splicing via transesterification reactions GO:0000375 118 0.109
ribosomal subunit export from nucleus GO:0000054 46 0.103
negative regulation of cellular biosynthetic process GO:0031327 312 0.103
nuclear transport GO:0051169 165 0.099
ribonucleoprotein complex subunit organization GO:0071826 152 0.096
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.095
single organism catabolic process GO:0044712 619 0.088
purine ribonucleoside metabolic process GO:0046128 380 0.088
ribonucleoside metabolic process GO:0009119 389 0.086
endonucleolytic cleavage involved in rrna processing GO:0000478 47 0.084
nucleotide catabolic process GO:0009166 330 0.080
purine nucleotide catabolic process GO:0006195 328 0.080
ribosomal small subunit biogenesis GO:0042274 124 0.078
nucleobase containing compound catabolic process GO:0034655 479 0.078
ribosome assembly GO:0042255 57 0.076
purine ribonucleotide metabolic process GO:0009150 372 0.075
nuclear polyadenylation dependent ncrna catabolic process GO:0071046 20 0.075
single organism developmental process GO:0044767 258 0.073
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 109 0.073
ribosome localization GO:0033750 46 0.070
purine nucleoside triphosphate catabolic process GO:0009146 329 0.069
pre replicative complex assembly GO:0036388 20 0.068
purine nucleoside metabolic process GO:0042278 380 0.067
establishment of organelle localization GO:0051656 96 0.066
organic cyclic compound catabolic process GO:1901361 499 0.066
ribonucleotide metabolic process GO:0009259 377 0.064
polyadenylation dependent ncrna catabolic process GO:0043634 20 0.064
cellular nitrogen compound catabolic process GO:0044270 494 0.063
positive regulation of rna metabolic process GO:0051254 294 0.062
protein complex assembly GO:0006461 302 0.061
rna splicing GO:0008380 131 0.060
nuclear polyadenylation dependent rrna catabolic process GO:0071035 18 0.059
endocytosis GO:0006897 90 0.057
vesicle mediated transport GO:0016192 335 0.056
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.055
organonitrogen compound catabolic process GO:1901565 404 0.055
ribose phosphate metabolic process GO:0019693 384 0.055
anatomical structure morphogenesis GO:0009653 160 0.054
ribonucleoprotein complex assembly GO:0022618 143 0.054
protein dna complex assembly GO:0065004 105 0.053
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.052
nucleoside metabolic process GO:0009116 394 0.052
nuclear export GO:0051168 124 0.051
ribonucleoside monophosphate metabolic process GO:0009161 265 0.051
mitotic cell cycle GO:0000278 306 0.050
regulation of cellular component organization GO:0051128 334 0.049
nucleotide metabolic process GO:0009117 453 0.049
purine ribonucleotide catabolic process GO:0009154 327 0.049
protein complex biogenesis GO:0070271 314 0.049
aromatic compound catabolic process GO:0019439 491 0.049
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.049
regulation of response to stimulus GO:0048583 157 0.048
nucleoside phosphate metabolic process GO:0006753 458 0.048
meiotic cell cycle process GO:1903046 229 0.048
negative regulation of biosynthetic process GO:0009890 312 0.048
multi organism reproductive process GO:0044703 216 0.048
cell communication GO:0007154 345 0.047
purine nucleoside monophosphate metabolic process GO:0009126 262 0.046
dna replication initiation GO:0006270 48 0.045
regulation of biological quality GO:0065008 391 0.045
organophosphate catabolic process GO:0046434 338 0.045
ribonucleoside triphosphate catabolic process GO:0009203 327 0.045
ribosomal large subunit export from nucleus GO:0000055 27 0.044
anatomical structure development GO:0048856 160 0.044
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.043
purine containing compound metabolic process GO:0072521 400 0.043
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.043
ribonucleoside triphosphate metabolic process GO:0009199 356 0.043
glycosyl compound metabolic process GO:1901657 398 0.042
lipid metabolic process GO:0006629 269 0.041
glycosyl compound catabolic process GO:1901658 335 0.041
organelle localization GO:0051640 128 0.040
organophosphate metabolic process GO:0019637 597 0.039
negative regulation of macromolecule metabolic process GO:0010605 375 0.039
establishment of ribosome localization GO:0033753 46 0.039
endonucleolytic cleavage of tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000479 47 0.038
negative regulation of cellular metabolic process GO:0031324 407 0.038
nucleoside phosphate catabolic process GO:1901292 331 0.037
purine ribonucleoside catabolic process GO:0046130 330 0.037
rrna containing ribonucleoprotein complex export from nucleus GO:0071428 46 0.035
rrna catabolic process GO:0016075 31 0.035
regulation of cell communication GO:0010646 124 0.035
exonucleolytic trimming to generate mature 3 end of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000467 18 0.035
nucleobase containing small molecule metabolic process GO:0055086 491 0.035
purine nucleoside catabolic process GO:0006152 330 0.035
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.034
organelle assembly GO:0070925 118 0.034
atp metabolic process GO:0046034 251 0.034
negative regulation of gene expression GO:0010629 312 0.033
mitotic cell cycle process GO:1903047 294 0.033
ribonucleoside catabolic process GO:0042454 332 0.032
purine nucleoside triphosphate metabolic process GO:0009144 356 0.032
ribonucleoprotein complex localization GO:0071166 46 0.032
ribonucleoprotein complex export from nucleus GO:0071426 46 0.032
rrna 3 end processing GO:0031125 22 0.032
protein dna complex subunit organization GO:0071824 153 0.031
purine containing compound catabolic process GO:0072523 332 0.031
cell wall organization GO:0071555 146 0.030
intracellular signal transduction GO:0035556 112 0.030
cell differentiation GO:0030154 161 0.030
pre replicative complex assembly involved in nuclear cell cycle dna replication GO:0006267 20 0.030
endonucleolytic cleavage in its1 to separate ssu rrna from 5 8s rrna and lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000447 43 0.029
chromosome segregation GO:0007059 159 0.029
rna catabolic process GO:0006401 118 0.029
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.029
pre replicative complex assembly involved in cell cycle dna replication GO:1902299 20 0.027
carbohydrate derivative catabolic process GO:1901136 339 0.027
negative regulation of rna metabolic process GO:0051253 262 0.027
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.027
gene silencing by rna GO:0031047 3 0.026
maturation of ssu rrna GO:0030490 105 0.026
regulation of molecular function GO:0065009 320 0.026
growth GO:0040007 157 0.026
response to abiotic stimulus GO:0009628 159 0.026
ribonucleotide catabolic process GO:0009261 327 0.026
single organism signaling GO:0044700 208 0.026
nuclear ncrna surveillance GO:0071029 20 0.025
regulation of signal transduction GO:0009966 114 0.025
regulation of intracellular signal transduction GO:1902531 78 0.025
cell development GO:0048468 107 0.025
multi organism cellular process GO:0044764 120 0.025
sexual reproduction GO:0019953 216 0.024
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.024
protein complex localization GO:0031503 32 0.024
modification dependent macromolecule catabolic process GO:0043632 203 0.023
rna 5 end processing GO:0000966 33 0.023
signaling GO:0023052 208 0.023
signal transduction GO:0007165 208 0.023
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.022
carbohydrate derivative metabolic process GO:1901135 549 0.022
organic acid metabolic process GO:0006082 352 0.022
mrna splicing via spliceosome GO:0000398 108 0.022
nuclear rna surveillance GO:0071027 30 0.021
regulation of catabolic process GO:0009894 199 0.021
dna replication GO:0006260 147 0.021
reproductive process GO:0022414 248 0.020
regulation of cellular catabolic process GO:0031329 195 0.020
negative regulation of rna biosynthetic process GO:1902679 260 0.020
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.019
rna surveillance GO:0071025 30 0.019
regulation of protein metabolic process GO:0051246 237 0.019
nucleoside triphosphate metabolic process GO:0009141 364 0.019
ncrna 5 end processing GO:0034471 32 0.019
regulation of mrna splicing via spliceosome GO:0048024 3 0.019
polyadenylation dependent rna catabolic process GO:0043633 22 0.019
regulation of phosphate metabolic process GO:0019220 230 0.018
regulation of cellular component size GO:0032535 50 0.018
sister chromatid segregation GO:0000819 93 0.018
negative regulation of transcription dna templated GO:0045892 258 0.018
negative regulation of cell communication GO:0010648 33 0.018
guanosine containing compound catabolic process GO:1901069 109 0.017
regulation of signaling GO:0023051 119 0.017
negative regulation of protein metabolic process GO:0051248 85 0.017
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.017
regulation of catalytic activity GO:0050790 307 0.016
regulation of dna replication GO:0006275 51 0.016
cellular developmental process GO:0048869 191 0.016
protein localization to organelle GO:0033365 337 0.016
protein targeting GO:0006605 272 0.016
purine nucleotide metabolic process GO:0006163 376 0.015
nuclear division GO:0000280 263 0.015
positive regulation of macromolecule metabolic process GO:0010604 394 0.015
cellular protein complex assembly GO:0043623 209 0.015
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.015
developmental process GO:0032502 261 0.015
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.015
reproduction of a single celled organism GO:0032505 191 0.014
conjugation with cellular fusion GO:0000747 106 0.013
maintenance of location GO:0051235 66 0.013
regulation of anatomical structure size GO:0090066 50 0.013
cytoskeleton organization GO:0007010 230 0.013
protein transport GO:0015031 345 0.013
ncrna catabolic process GO:0034661 33 0.013
cell growth GO:0016049 89 0.013
regulation of translation GO:0006417 89 0.013
positive regulation of gene expression GO:0010628 321 0.013
rna 3 end processing GO:0031123 88 0.013
ribonucleoside monophosphate catabolic process GO:0009158 224 0.013
rrna 5 end processing GO:0000967 32 0.013
gtp metabolic process GO:0046039 107 0.013
establishment of protein localization GO:0045184 367 0.013
protein localization to nucleus GO:0034504 74 0.013
amine metabolic process GO:0009308 51 0.013
regulation of cellular amine metabolic process GO:0033238 21 0.013
endonucleolytic cleavage in 5 ets of tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000480 30 0.012
rna localization GO:0006403 112 0.012
regulation of localization GO:0032879 127 0.012
response to osmotic stress GO:0006970 83 0.012
positive regulation of transcription dna templated GO:0045893 286 0.012
response to cell cycle checkpoint signaling GO:0072396 8 0.012
positive regulation of nucleic acid templated transcription GO:1903508 286 0.012
nitrogen compound transport GO:0071705 212 0.012
negative regulation of nucleic acid templated transcription GO:1903507 260 0.012
multi organism process GO:0051704 233 0.012
regulation of cell cycle GO:0051726 195 0.012
atp catabolic process GO:0006200 224 0.012
regulation of dna dependent dna replication initiation GO:0030174 21 0.012
positive regulation of rna biosynthetic process GO:1902680 286 0.012
er associated ubiquitin dependent protein catabolic process GO:0030433 46 0.012
positive regulation of programmed cell death GO:0043068 3 0.012
regulation of ras protein signal transduction GO:0046578 47 0.011
gtp catabolic process GO:0006184 107 0.011
nucleoside monophosphate catabolic process GO:0009125 224 0.011
cellular protein complex localization GO:0034629 28 0.011
cell cycle checkpoint GO:0000075 82 0.011
single organism reproductive process GO:0044702 159 0.011
cell division GO:0051301 205 0.011
regulation of phosphorus metabolic process GO:0051174 230 0.011
regulation of small gtpase mediated signal transduction GO:0051056 47 0.011
positive regulation of molecular function GO:0044093 185 0.011
response to uv GO:0009411 4 0.010
cellular component assembly involved in morphogenesis GO:0010927 73 0.010
regulation of rna splicing GO:0043484 3 0.010
posttranscriptional regulation of gene expression GO:0010608 115 0.010
anatomical structure formation involved in morphogenesis GO:0048646 136 0.010
negative regulation of cellular catabolic process GO:0031330 43 0.010
purine nucleoside monophosphate catabolic process GO:0009128 224 0.010

RPF1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org