Saccharomyces cerevisiae

34 known processes

RPN9 (YDR427W)

Rpn9p

RPN9 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
ubiquitin dependent protein catabolic process GO:0006511 181 0.956
proteolysis GO:0006508 268 0.928
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.877
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.858
modification dependent macromolecule catabolic process GO:0043632 203 0.838
cellular protein catabolic process GO:0044257 213 0.784
protein catabolic process GO:0030163 221 0.760
modification dependent protein catabolic process GO:0019941 181 0.700
proteasomal protein catabolic process GO:0010498 141 0.537
regulation of proteasomal ubiquitin dependent protein catabolic process GO:0032434 30 0.435
macromolecule catabolic process GO:0009057 383 0.400
dna templated transcriptional preinitiation complex assembly GO:0070897 51 0.392
cellular macromolecule catabolic process GO:0044265 363 0.369
proteasome regulatory particle assembly GO:0070682 11 0.365
dna repair GO:0006281 236 0.329
proteasome assembly GO:0043248 31 0.301
cellular response to dna damage stimulus GO:0006974 287 0.286
negative regulation of rna biosynthetic process GO:1902679 260 0.207
cellular protein complex assembly GO:0043623 209 0.160
double strand break repair via homologous recombination GO:0000724 54 0.127
double strand break repair GO:0006302 105 0.122
dna templated transcription initiation GO:0006352 71 0.108
protein dna complex assembly GO:0065004 105 0.104
regulation of cellular protein catabolic process GO:1903362 36 0.095
metaphase anaphase transition of mitotic cell cycle GO:0007091 28 0.094
mitotic cell cycle process GO:1903047 294 0.094
Fly
regulation of transcription initiation from rna polymerase ii promoter GO:0060260 19 0.094
transcription initiation from rna polymerase ii promoter GO:0006367 55 0.092
negative regulation of rna metabolic process GO:0051253 262 0.091
rrna transcription GO:0009303 31 0.091
anaphase promoting complex dependent proteasomal ubiquitin dependent protein catabolic process GO:0031145 35 0.089
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.084
positive regulation of rna polymerase ii transcriptional preinitiation complex assembly GO:0045899 11 0.082
regulation of dna templated transcription initiation GO:2000142 19 0.079
protein complex biogenesis GO:0070271 314 0.078
er associated ubiquitin dependent protein catabolic process GO:0030433 46 0.077
negative regulation of nucleic acid templated transcription GO:1903507 260 0.075
negative regulation of gene expression GO:0010629 312 0.073
regulation of protein catabolic process GO:0042176 40 0.073
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 36 0.071
regulation of proteasomal protein catabolic process GO:0061136 34 0.069
negative regulation of macromolecule metabolic process GO:0010605 375 0.066
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.066
nucleoside phosphate biosynthetic process GO:1901293 80 0.066
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.065
rna polymerase ii transcriptional preinitiation complex assembly GO:0051123 40 0.061
negative regulation of cellular metabolic process GO:0031324 407 0.058
positive regulation of dna templated transcription initiation GO:2000144 13 0.055
negative regulation of transcription dna templated GO:0045892 258 0.050
cofactor biosynthetic process GO:0051188 80 0.050
positive regulation of transcription initiation from rna polymerase ii promoter GO:0060261 13 0.048
regulation of cell cycle GO:0051726 195 0.045
Fly
regulation of molecular function GO:0065009 320 0.044
regulation of catabolic process GO:0009894 199 0.040
regulation of nuclear division GO:0051783 103 0.039
Fly
regulation of proteolysis GO:0030162 44 0.039
carbohydrate derivative metabolic process GO:1901135 549 0.038
regulation of cell division GO:0051302 113 0.037
Fly
organophosphate metabolic process GO:0019637 597 0.036
dna recombination GO:0006310 172 0.036
chromosome segregation GO:0007059 159 0.035
non recombinational repair GO:0000726 33 0.035
protein complex assembly GO:0006461 302 0.034
regulation of cellular protein metabolic process GO:0032268 232 0.033
spindle organization GO:0007051 37 0.032
coenzyme biosynthetic process GO:0009108 66 0.032
regulation of cellular component organization GO:0051128 334 0.030
Fly
transcription elongation from rna polymerase ii promoter GO:0006368 81 0.030
mitotic spindle elongation GO:0000022 14 0.030
regulation of organelle organization GO:0033043 243 0.030
Fly
regulation of protein complex assembly GO:0043254 77 0.030
nuclear division GO:0000280 263 0.030
Fly
vesicle mediated transport GO:0016192 335 0.029
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.029
positive regulation of macromolecule metabolic process GO:0010604 394 0.028
recombinational repair GO:0000725 64 0.027
regulation of cell cycle process GO:0010564 150 0.027
Fly
positive regulation of cellular biosynthetic process GO:0031328 336 0.027
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.026
negative regulation of organelle organization GO:0010639 103 0.026
mitotic spindle organization GO:0007052 30 0.026
microtubule based process GO:0007017 117 0.025
proteasomal ubiquitin independent protein catabolic process GO:0010499 14 0.025
regulation of mitotic cell cycle GO:0007346 107 0.025
Fly
protein modification by small protein conjugation or removal GO:0070647 172 0.024
nucleoside phosphate metabolic process GO:0006753 458 0.024
negative regulation of biosynthetic process GO:0009890 312 0.024
protein maturation GO:0051604 76 0.023
coenzyme metabolic process GO:0006732 104 0.022
regulation of gene expression epigenetic GO:0040029 147 0.022
organonitrogen compound catabolic process GO:1901565 404 0.022
ribonucleotide metabolic process GO:0009259 377 0.021
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.021
response to organic cyclic compound GO:0014070 1 0.021
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.021
carbohydrate derivative biosynthetic process GO:1901137 181 0.021
rrna catabolic process GO:0016075 31 0.020
ribosome biogenesis GO:0042254 335 0.020
positive regulation of cellular component biogenesis GO:0044089 45 0.020
nucleoside metabolic process GO:0009116 394 0.019
gene silencing GO:0016458 151 0.019
regulation of rna polymerase ii transcriptional preinitiation complex assembly GO:0045898 13 0.019
positive regulation of sequence specific dna binding transcription factor activity GO:0051091 2 0.019
protein deubiquitination GO:0016579 17 0.019
regulation of biological quality GO:0065008 391 0.019
protein processing GO:0016485 64 0.019
rrna metabolic process GO:0016072 244 0.019
regulation of mitosis GO:0007088 65 0.019
Fly
meiotic cell cycle GO:0051321 272 0.019
conjugation with cellular fusion GO:0000747 106 0.018
chromatin modification GO:0016568 200 0.018
regulation of chromosome organization GO:0033044 66 0.018
cell division GO:0051301 205 0.018
Fly
regulation of protein metabolic process GO:0051246 237 0.018
negative regulation of proteasomal protein catabolic process GO:1901799 25 0.018
single organism catabolic process GO:0044712 619 0.018
mitotic sister chromatid segregation GO:0000070 85 0.018
protein localization to organelle GO:0033365 337 0.018
regulation of cellular component biogenesis GO:0044087 112 0.018
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 40 0.018
peroxisome organization GO:0007031 68 0.018
negative regulation of proteolysis involved in cellular protein catabolic process GO:1903051 27 0.018
mitochondrion organization GO:0007005 261 0.017
positive regulation of protein metabolic process GO:0051247 93 0.017
positive regulation of cellular component organization GO:0051130 116 0.017
purine containing compound metabolic process GO:0072521 400 0.017
protein dna complex subunit organization GO:0071824 153 0.016
meiotic nuclear division GO:0007126 163 0.016
single organism cellular localization GO:1902580 375 0.016
rna catabolic process GO:0006401 118 0.015
heterocycle catabolic process GO:0046700 494 0.015
nucleobase containing compound catabolic process GO:0034655 479 0.015
cytoskeleton organization GO:0007010 230 0.015
mrna export from nucleus GO:0006406 60 0.015
protein modification by small protein removal GO:0070646 29 0.015
multi organism cellular process GO:0044764 120 0.015
programmed cell death GO:0012501 30 0.014
negative regulation of protein maturation GO:1903318 33 0.014
nucleotide biosynthetic process GO:0009165 79 0.014
positive regulation of catabolic process GO:0009896 135 0.014
regulation of phosphorus metabolic process GO:0051174 230 0.014
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.014
ribose phosphate metabolic process GO:0019693 384 0.014
nucleotide metabolic process GO:0009117 453 0.014
organophosphate biosynthetic process GO:0090407 182 0.013
maintenance of dna repeat elements GO:0043570 20 0.013
regulation of catalytic activity GO:0050790 307 0.013
covalent chromatin modification GO:0016569 119 0.013
chromatin organization GO:0006325 242 0.013
organonitrogen compound biosynthetic process GO:1901566 314 0.013
organelle fission GO:0048285 272 0.012
Fly
regulation of hydrolase activity GO:0051336 133 0.012
purine nucleotide metabolic process GO:0006163 376 0.012
aromatic compound catabolic process GO:0019439 491 0.012
purine nucleoside biosynthetic process GO:0042451 31 0.012
energy derivation by oxidation of organic compounds GO:0015980 125 0.012
regulation of response to dna damage stimulus GO:2001020 17 0.012
ncrna processing GO:0034470 330 0.012
positive regulation of protein complex assembly GO:0031334 39 0.012
purine ribonucleotide metabolic process GO:0009150 372 0.012
cell death GO:0008219 30 0.011
carbohydrate derivative catabolic process GO:1901136 339 0.011
positive regulation of molecular function GO:0044093 185 0.011
rna export from nucleus GO:0006405 88 0.011
regulation of protein processing GO:0070613 34 0.011
ncrna catabolic process GO:0034661 33 0.011
positive regulation of gene expression GO:0010628 321 0.011
nucleoside catabolic process GO:0009164 335 0.011
establishment of protein localization GO:0045184 367 0.011
negative regulation of proteasomal ubiquitin dependent protein catabolic process GO:0032435 24 0.011
regulation of sequence specific dna binding transcription factor activity GO:0051090 6 0.011
nucleobase containing compound transport GO:0015931 124 0.010
dna templated transcription elongation GO:0006354 91 0.010
phosphorylation GO:0016310 291 0.010
purine containing compound catabolic process GO:0072523 332 0.010
mitotic cell cycle GO:0000278 306 0.010
Fly
ascospore wall assembly GO:0030476 52 0.010
purine nucleoside metabolic process GO:0042278 380 0.010
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.010

RPN9 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org