Saccharomyces cerevisiae

22 known processes

BI3 (Q0115)

Bi3p

BI3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
organophosphate metabolic process GO:0019637 597 0.127
Yeast
nucleoside monophosphate metabolic process GO:0009123 267 0.116
Yeast
purine nucleotide metabolic process GO:0006163 376 0.114
Yeast
nucleoside metabolic process GO:0009116 394 0.112
Yeast
carbohydrate derivative metabolic process GO:1901135 549 0.112
Yeast
nucleoside triphosphate metabolic process GO:0009141 364 0.108
Yeast
nucleoside phosphate metabolic process GO:0006753 458 0.107
Yeast
nucleobase containing small molecule metabolic process GO:0055086 491 0.106
Yeast
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.105
Yeast
ribonucleoside monophosphate metabolic process GO:0009161 265 0.105
Yeast
purine ribonucleoside metabolic process GO:0046128 380 0.103
Yeast
ribonucleoside triphosphate metabolic process GO:0009199 356 0.100
Yeast
nucleotide metabolic process GO:0009117 453 0.100
Yeast
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.093
Yeast
glycosyl compound metabolic process GO:1901657 398 0.092
Yeast
purine nucleoside triphosphate metabolic process GO:0009144 356 0.088
Yeast
ribose phosphate metabolic process GO:0019693 384 0.086
Yeast
rrna metabolic process GO:0016072 244 0.084
purine containing compound metabolic process GO:0072521 400 0.084
Yeast
rrna processing GO:0006364 227 0.082
ribonucleoside metabolic process GO:0009119 389 0.081
Yeast
purine ribonucleotide metabolic process GO:0009150 372 0.080
Yeast
ion transport GO:0006811 274 0.078
Yeast
purine nucleoside metabolic process GO:0042278 380 0.077
Yeast
ribonucleotide metabolic process GO:0009259 377 0.075
Yeast
ribosome biogenesis GO:0042254 335 0.072
rna modification GO:0009451 99 0.069
energy derivation by oxidation of organic compounds GO:0015980 125 0.067
Yeast
atp metabolic process GO:0046034 251 0.066
Yeast
transmembrane transport GO:0055085 349 0.064
Yeast
oxidation reduction process GO:0055114 353 0.062
Yeast
ncrna processing GO:0034470 330 0.061
rrna modification GO:0000154 19 0.057
organonitrogen compound biosynthetic process GO:1901566 314 0.057
phosphorylation GO:0016310 291 0.053
Yeast
purine nucleoside monophosphate metabolic process GO:0009126 262 0.051
Yeast
carbohydrate derivative biosynthetic process GO:1901137 181 0.050
regulation of biological quality GO:0065008 391 0.049
generation of precursor metabolites and energy GO:0006091 147 0.047
Yeast
single organism catabolic process GO:0044712 619 0.047
cellular respiration GO:0045333 82 0.046
Yeast
inorganic ion transmembrane transport GO:0098660 109 0.043
Yeast
response to chemical GO:0042221 390 0.042
aerobic respiration GO:0009060 55 0.042
Yeast
negative regulation of cellular metabolic process GO:0031324 407 0.042
cation transport GO:0006812 166 0.041
Yeast
ion transmembrane transport GO:0034220 200 0.041
Yeast
rna splicing via transesterification reactions GO:0000375 118 0.040
oxoacid metabolic process GO:0043436 351 0.039
cellular response to chemical stimulus GO:0070887 315 0.038
nucleoside phosphate biosynthetic process GO:1901293 80 0.038
carboxylic acid metabolic process GO:0019752 338 0.037
translation GO:0006412 230 0.037
rna splicing GO:0008380 131 0.035
ribose phosphate biosynthetic process GO:0046390 50 0.034
regulation of cellular component organization GO:0051128 334 0.034
organic acid metabolic process GO:0006082 352 0.033
methylation GO:0032259 101 0.033
organophosphate biosynthetic process GO:0090407 182 0.033
negative regulation of macromolecule metabolic process GO:0010605 375 0.032
macromolecule catabolic process GO:0009057 383 0.032
cellular macromolecule catabolic process GO:0044265 363 0.031
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.030
positive regulation of macromolecule metabolic process GO:0010604 394 0.030
cell communication GO:0007154 345 0.030
organic cyclic compound catabolic process GO:1901361 499 0.030
cellular amino acid metabolic process GO:0006520 225 0.030
heterocycle catabolic process GO:0046700 494 0.029
reproductive process GO:0022414 248 0.029
inorganic cation transmembrane transport GO:0098662 98 0.029
Yeast
mitochondrion organization GO:0007005 261 0.028
establishment of protein localization GO:0045184 367 0.028
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.028
single organism cellular localization GO:1902580 375 0.027
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.027
organonitrogen compound catabolic process GO:1901565 404 0.027
nitrogen compound transport GO:0071705 212 0.027
macromolecule methylation GO:0043414 85 0.027
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.027
cellular nitrogen compound catabolic process GO:0044270 494 0.026
nucleoside monophosphate biosynthetic process GO:0009124 33 0.026
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.026
rrna methylation GO:0031167 13 0.026
single organism developmental process GO:0044767 258 0.026
ribonucleotide biosynthetic process GO:0009260 44 0.026
nucleobase containing compound catabolic process GO:0034655 479 0.026
purine containing compound biosynthetic process GO:0072522 53 0.025
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.025
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.025
positive regulation of cellular biosynthetic process GO:0031328 336 0.025
developmental process GO:0032502 261 0.025
aromatic compound catabolic process GO:0019439 491 0.025
protein localization to organelle GO:0033365 337 0.025
positive regulation of biosynthetic process GO:0009891 336 0.025
protein transport GO:0015031 345 0.024
lipid metabolic process GO:0006629 269 0.024
dna recombination GO:0006310 172 0.024
negative regulation of biosynthetic process GO:0009890 312 0.024
negative regulation of cellular biosynthetic process GO:0031327 312 0.024
multi organism process GO:0051704 233 0.024
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.024
purine nucleotide biosynthetic process GO:0006164 41 0.024
protein complex assembly GO:0006461 302 0.024
sexual reproduction GO:0019953 216 0.023
membrane organization GO:0061024 276 0.023
rna methylation GO:0001510 39 0.023
negative regulation of gene expression GO:0010629 312 0.023
multi organism reproductive process GO:0044703 216 0.023
regulation of organelle organization GO:0033043 243 0.023
negative regulation of transcription dna templated GO:0045892 258 0.023
single organism membrane organization GO:0044802 275 0.023
homeostatic process GO:0042592 227 0.023
positive regulation of gene expression GO:0010628 321 0.023
organic anion transport GO:0015711 114 0.023
small molecule biosynthetic process GO:0044283 258 0.023
negative regulation of rna biosynthetic process GO:1902679 260 0.022
intracellular protein transport GO:0006886 319 0.022
negative regulation of rna metabolic process GO:0051253 262 0.022
cellular lipid metabolic process GO:0044255 229 0.022
ribonucleoprotein complex assembly GO:0022618 143 0.022
negative regulation of nucleic acid templated transcription GO:1903507 260 0.022
reproduction of a single celled organism GO:0032505 191 0.022
single organism carbohydrate metabolic process GO:0044723 237 0.021
positive regulation of nucleic acid templated transcription GO:1903508 286 0.021
electron transport chain GO:0022900 25 0.021
Yeast
regulation of protein metabolic process GO:0051246 237 0.021
carboxylic acid biosynthetic process GO:0046394 152 0.021
protein complex biogenesis GO:0070271 314 0.021
anion transport GO:0006820 145 0.021
rrna pseudouridine synthesis GO:0031118 4 0.021
response to organic cyclic compound GO:0014070 1 0.021
mitotic cell cycle GO:0000278 306 0.020
single organism reproductive process GO:0044702 159 0.020
ribonucleoprotein complex subunit organization GO:0071826 152 0.020
mitochondrial translation GO:0032543 52 0.020
positive regulation of transcription dna templated GO:0045893 286 0.020
carbohydrate metabolic process GO:0005975 252 0.020
cellular developmental process GO:0048869 191 0.020
atp synthesis coupled electron transport GO:0042773 25 0.020
Yeast
organic acid biosynthetic process GO:0016053 152 0.020
single organism signaling GO:0044700 208 0.020
mitotic cell cycle process GO:1903047 294 0.020
positive regulation of rna metabolic process GO:0051254 294 0.020
regulation of cellular protein metabolic process GO:0032268 232 0.019
signaling GO:0023052 208 0.019
regulation of cell cycle GO:0051726 195 0.019
response to abiotic stimulus GO:0009628 159 0.019
response to organic substance GO:0010033 182 0.019
purine ribonucleotide biosynthetic process GO:0009152 39 0.019
signal transduction GO:0007165 208 0.019
cellular response to dna damage stimulus GO:0006974 287 0.019
regulation of catabolic process GO:0009894 199 0.019
cellular response to extracellular stimulus GO:0031668 150 0.019
alpha amino acid metabolic process GO:1901605 124 0.019
developmental process involved in reproduction GO:0003006 159 0.019
mrna metabolic process GO:0016071 269 0.019
positive regulation of rna biosynthetic process GO:1902680 286 0.018
response to extracellular stimulus GO:0009991 156 0.018
regulation of molecular function GO:0065009 320 0.018
proteolysis GO:0006508 268 0.018
cellular response to organic substance GO:0071310 159 0.018
purine ribonucleoside monophosphate biosynthetic process GO:0009168 28 0.018
regulation of cellular catabolic process GO:0031329 195 0.018
nucleoside biosynthetic process GO:0009163 38 0.018
atp biosynthetic process GO:0006754 17 0.018
cell division GO:0051301 205 0.018
regulation of catalytic activity GO:0050790 307 0.018
mitochondrial atp synthesis coupled electron transport GO:0042775 25 0.018
Yeast
reproductive process in single celled organism GO:0022413 145 0.018
regulation of phosphate metabolic process GO:0019220 230 0.018
cellular amino acid biosynthetic process GO:0008652 118 0.018
regulation of phosphorus metabolic process GO:0051174 230 0.018
atp synthesis coupled proton transport GO:0015986 17 0.017
ribonucleoside biosynthetic process GO:0042455 37 0.017
monovalent inorganic cation transport GO:0015672 78 0.017
Yeast
monocarboxylic acid metabolic process GO:0032787 122 0.017
hydrogen transport GO:0006818 61 0.017
Yeast
response to external stimulus GO:0009605 158 0.017
organic hydroxy compound metabolic process GO:1901615 125 0.017
chemical homeostasis GO:0048878 137 0.017
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.017
purine ribonucleoside biosynthetic process GO:0046129 31 0.017
cellular homeostasis GO:0019725 138 0.017
nucleobase containing compound transport GO:0015931 124 0.017
organic acid transport GO:0015849 77 0.017
vesicle mediated transport GO:0016192 335 0.017
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.017
Yeast
anatomical structure morphogenesis GO:0009653 160 0.017
lipid biosynthetic process GO:0008610 170 0.016
cellular protein catabolic process GO:0044257 213 0.016
organelle fission GO:0048285 272 0.016
response to nutrient levels GO:0031667 150 0.016
alcohol metabolic process GO:0006066 112 0.016
posttranscriptional regulation of gene expression GO:0010608 115 0.016
trna processing GO:0008033 101 0.016
coenzyme metabolic process GO:0006732 104 0.016
cell wall organization GO:0071555 146 0.016
cell wall organization or biogenesis GO:0071554 190 0.016
small molecule catabolic process GO:0044282 88 0.016
regulation of cell cycle process GO:0010564 150 0.016
meiotic cell cycle GO:0051321 272 0.016
filamentous growth GO:0030447 124 0.016
nucleoside triphosphate biosynthetic process GO:0009142 22 0.016
cellular response to external stimulus GO:0071496 150 0.015
protein catabolic process GO:0030163 221 0.015
establishment of protein localization to organelle GO:0072594 278 0.015
cellular chemical homeostasis GO:0055082 123 0.015
anatomical structure development GO:0048856 160 0.015
protein targeting GO:0006605 272 0.015
cell differentiation GO:0030154 161 0.015
fungal type cell wall organization or biogenesis GO:0071852 169 0.015
cellular carbohydrate metabolic process GO:0044262 135 0.015
cellular response to oxidative stress GO:0034599 94 0.015
dna replication GO:0006260 147 0.015
cellular amine metabolic process GO:0044106 51 0.015
dna repair GO:0006281 236 0.015
regulation of response to stimulus GO:0048583 157 0.015
growth GO:0040007 157 0.015
nuclear division GO:0000280 263 0.015
sporulation resulting in formation of a cellular spore GO:0030435 129 0.015
external encapsulating structure organization GO:0045229 146 0.015
cellular protein complex assembly GO:0043623 209 0.015
ion homeostasis GO:0050801 118 0.015
fungal type cell wall organization GO:0031505 145 0.015
sporulation GO:0043934 132 0.015
carbohydrate derivative catabolic process GO:1901136 339 0.015
organophosphate catabolic process GO:0046434 338 0.014
meiotic cell cycle process GO:1903046 229 0.014
amine metabolic process GO:0009308 51 0.014
glycosyl compound biosynthetic process GO:1901659 42 0.014
chromatin organization GO:0006325 242 0.014
carboxylic acid transport GO:0046942 74 0.014
maturation of 5 8s rrna GO:0000460 80 0.014
conjugation GO:0000746 107 0.014
regulation of translation GO:0006417 89 0.014
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.014
organelle assembly GO:0070925 118 0.014
purine nucleoside biosynthetic process GO:0042451 31 0.014
trna metabolic process GO:0006399 151 0.014
phospholipid metabolic process GO:0006644 125 0.014
glycerolipid metabolic process GO:0046486 108 0.014
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.014
regulation of localization GO:0032879 127 0.014
ribonucleoside monophosphate biosynthetic process GO:0009156 31 0.014
alpha amino acid biosynthetic process GO:1901607 91 0.014
gene silencing GO:0016458 151 0.014
conjugation with cellular fusion GO:0000747 106 0.014
glycosyl compound catabolic process GO:1901658 335 0.014
pseudouridine synthesis GO:0001522 13 0.014
positive regulation of cell death GO:0010942 3 0.014
glycerophospholipid metabolic process GO:0006650 98 0.014
multi organism cellular process GO:0044764 120 0.014
anatomical structure formation involved in morphogenesis GO:0048646 136 0.014
negative regulation of gene expression epigenetic GO:0045814 147 0.013
positive regulation of programmed cell death GO:0043068 3 0.013
rna localization GO:0006403 112 0.013
cellular response to nutrient levels GO:0031669 144 0.013
hydrogen ion transmembrane transport GO:1902600 49 0.013
Yeast
cofactor metabolic process GO:0051186 126 0.013
regulation of dna metabolic process GO:0051052 100 0.013
positive regulation of apoptotic process GO:0043065 3 0.013
purine ribonucleotide catabolic process GO:0009154 327 0.013
organelle localization GO:0051640 128 0.013
filamentous growth of a population of unicellular organisms GO:0044182 109 0.013
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.013
negative regulation of cellular component organization GO:0051129 109 0.013
nucleoside catabolic process GO:0009164 335 0.013
rna export from nucleus GO:0006405 88 0.013
chromatin modification GO:0016568 200 0.013
phospholipid biosynthetic process GO:0008654 89 0.013
cellular ion homeostasis GO:0006873 112 0.013
oxidative phosphorylation GO:0006119 26 0.013
Yeast
regulation of metal ion transport GO:0010959 2 0.013
nucleoside phosphate catabolic process GO:1901292 331 0.013
cellular ketone metabolic process GO:0042180 63 0.013
nucleotide catabolic process GO:0009166 330 0.013
dephosphorylation GO:0016311 127 0.013
sexual sporulation GO:0034293 113 0.013
purine nucleoside triphosphate catabolic process GO:0009146 329 0.013
purine containing compound catabolic process GO:0072523 332 0.013
cation homeostasis GO:0055080 105 0.013
ribonucleoside catabolic process GO:0042454 332 0.013
regulation of gene expression epigenetic GO:0040029 147 0.013
ribosomal small subunit biogenesis GO:0042274 124 0.013
mrna processing GO:0006397 185 0.013
energy coupled proton transport down electrochemical gradient GO:0015985 17 0.013
ascospore formation GO:0030437 107 0.013
protein modification by small protein conjugation or removal GO:0070647 172 0.013
rna splicing via transesterification reactions with guanosine as nucleophile GO:0000376 10 0.013
vacuolar transport GO:0007034 145 0.013
nuclear export GO:0051168 124 0.013
nucleocytoplasmic transport GO:0006913 163 0.012
response to oxidative stress GO:0006979 99 0.012
purine nucleotide catabolic process GO:0006195 328 0.012
rna phosphodiester bond hydrolysis GO:0090501 112 0.012
purine nucleoside catabolic process GO:0006152 330 0.012
proton transport GO:0015992 61 0.012
Yeast
nucleotide biosynthetic process GO:0009165 79 0.012
cation transmembrane transport GO:0098655 135 0.012
Yeast
nucleoside triphosphate catabolic process GO:0009143 329 0.012
rna transport GO:0050658 92 0.012
mitotic cell cycle phase transition GO:0044772 141 0.012
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.012
regulation of cellular component biogenesis GO:0044087 112 0.012
chromatin silencing GO:0006342 147 0.012
vacuole organization GO:0007033 75 0.012
maturation of ssu rrna GO:0030490 105 0.012
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.012
positive regulation of cellular component organization GO:0051130 116 0.012
response to osmotic stress GO:0006970 83 0.012
modification dependent macromolecule catabolic process GO:0043632 203 0.012
aging GO:0007568 71 0.012
purine ribonucleoside catabolic process GO:0046130 330 0.012
regulation of cellular ketone metabolic process GO:0010565 42 0.012
ribonucleotide catabolic process GO:0009261 327 0.012
detection of glucose GO:0051594 3 0.012
cytoplasmic translation GO:0002181 65 0.012
cellular cation homeostasis GO:0030003 100 0.012
positive regulation of molecular function GO:0044093 185 0.012
regulation of cell division GO:0051302 113 0.012
ribonucleoside triphosphate catabolic process GO:0009203 327 0.012
golgi vesicle transport GO:0048193 188 0.012
oxidoreduction coenzyme metabolic process GO:0006733 58 0.012
dna dependent dna replication GO:0006261 115 0.012
cell development GO:0048468 107 0.012
ribosome assembly GO:0042255 57 0.012
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.012
organic acid catabolic process GO:0016054 71 0.012
nucleic acid transport GO:0050657 94 0.012
cytoskeleton organization GO:0007010 230 0.012
protein maturation GO:0051604 76 0.012
carboxylic acid catabolic process GO:0046395 71 0.011
protein dna complex subunit organization GO:0071824 153 0.011
regulation of signaling GO:0023051 119 0.011
protein localization to membrane GO:0072657 102 0.011
intracellular signal transduction GO:0035556 112 0.011
response to uv GO:0009411 4 0.011
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.011
cell growth GO:0016049 89 0.011
response to starvation GO:0042594 96 0.011
pseudohyphal growth GO:0007124 75 0.011
modification dependent protein catabolic process GO:0019941 181 0.011
single organism carbohydrate catabolic process GO:0044724 73 0.011
protein phosphorylation GO:0006468 197 0.011
detection of stimulus GO:0051606 4 0.011
amino acid transport GO:0006865 45 0.011
regulation of hydrolase activity GO:0051336 133 0.011
cell cycle phase transition GO:0044770 144 0.011
transition metal ion homeostasis GO:0055076 59 0.011
sulfur compound biosynthetic process GO:0044272 53 0.011
negative regulation of organelle organization GO:0010639 103 0.011
cellular component disassembly GO:0022411 86 0.011
meiotic nuclear division GO:0007126 163 0.011
regulation of cellular amine metabolic process GO:0033238 21 0.011
positive regulation of catabolic process GO:0009896 135 0.011
ubiquitin dependent protein catabolic process GO:0006511 181 0.011
cellular metal ion homeostasis GO:0006875 78 0.011
cellular component morphogenesis GO:0032989 97 0.011
nuclear transcribed mrna catabolic process GO:0000956 89 0.011
cleavage involved in rrna processing GO:0000469 69 0.011
sulfur compound metabolic process GO:0006790 95 0.011
positive regulation of protein metabolic process GO:0051247 93 0.011
regulation of nuclear division GO:0051783 103 0.011
positive regulation of catalytic activity GO:0043085 178 0.011
establishment of organelle localization GO:0051656 96 0.011
regulation of dna templated transcription in response to stress GO:0043620 51 0.011
purine ribonucleoside triphosphate biosynthetic process GO:0009206 17 0.011
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 96 0.010
response to hypoxia GO:0001666 4 0.010
regulation of cell communication GO:0010646 124 0.010
mitotic nuclear division GO:0007067 131 0.010
establishment of rna localization GO:0051236 92 0.010
negative regulation of cellular protein metabolic process GO:0032269 85 0.010
response to oxygen containing compound GO:1901700 61 0.010
cofactor biosynthetic process GO:0051188 80 0.010
regulation of transcription from rna polymerase ii promoter in response to stress GO:0043618 51 0.010
chromosome segregation GO:0007059 159 0.010
nuclear transport GO:0051169 165 0.010
nucleoside monophosphate catabolic process GO:0009125 224 0.010
regulation of response to drug GO:2001023 3 0.010
cellular response to starvation GO:0009267 90 0.010
cellular amino acid catabolic process GO:0009063 48 0.010
negative regulation of protein metabolic process GO:0051248 85 0.010
response to temperature stimulus GO:0009266 74 0.010
positive regulation of cytoplasmic transport GO:1903651 4 0.010
detection of chemical stimulus GO:0009593 3 0.010
regulation of signal transduction GO:0009966 114 0.010
macromolecular complex disassembly GO:0032984 80 0.010
rna catabolic process GO:0006401 118 0.010
carbohydrate catabolic process GO:0016052 77 0.010

BI3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.017