Saccharomyces cerevisiae

21 known processes

EFM1 (YHL039W)

Efm1p

EFM1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
peptidyl amino acid modification GO:0018193 116 0.236
negative regulation of cellular metabolic process GO:0031324 407 0.175
small molecule biosynthetic process GO:0044283 258 0.174
regulation of cellular protein metabolic process GO:0032268 232 0.152
chromatin organization GO:0006325 242 0.148
glycosyl compound metabolic process GO:1901657 398 0.119
cellular amino acid metabolic process GO:0006520 225 0.116
carbohydrate derivative metabolic process GO:1901135 549 0.113
nucleoside phosphate metabolic process GO:0006753 458 0.111
ribosomal large subunit biogenesis GO:0042273 98 0.106
nucleobase containing compound catabolic process GO:0034655 479 0.105
phosphorylation GO:0016310 291 0.099
carboxylic acid biosynthetic process GO:0046394 152 0.099
ribosome assembly GO:0042255 57 0.096
nucleoside monophosphate metabolic process GO:0009123 267 0.091
protein localization to nucleus GO:0034504 74 0.090
purine ribonucleotide metabolic process GO:0009150 372 0.089
heterocycle catabolic process GO:0046700 494 0.088
nucleotide metabolic process GO:0009117 453 0.087
nucleobase containing small molecule metabolic process GO:0055086 491 0.087
oxoacid metabolic process GO:0043436 351 0.085
histone modification GO:0016570 119 0.084
regulation of protein metabolic process GO:0051246 237 0.083
protein targeting to nucleus GO:0044744 57 0.081
negative regulation of macromolecule metabolic process GO:0010605 375 0.080
cellular amino acid biosynthetic process GO:0008652 118 0.078
organic acid metabolic process GO:0006082 352 0.078
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.077
cellular nitrogen compound catabolic process GO:0044270 494 0.075
nucleoside metabolic process GO:0009116 394 0.074
chromatin modification GO:0016568 200 0.072
protein alkylation GO:0008213 48 0.070
single organism membrane organization GO:0044802 275 0.070
protein targeting GO:0006605 272 0.067
gene silencing GO:0016458 151 0.066
cellular response to chemical stimulus GO:0070887 315 0.066
organophosphate biosynthetic process GO:0090407 182 0.063
positive regulation of cellular biosynthetic process GO:0031328 336 0.062
organonitrogen compound biosynthetic process GO:1901566 314 0.061
carboxylic acid metabolic process GO:0019752 338 0.061
regulation of gene expression epigenetic GO:0040029 147 0.061
peptidyl lysine modification GO:0018205 77 0.061
ribose phosphate metabolic process GO:0019693 384 0.060
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.057
protein import GO:0017038 122 0.056
response to organic cyclic compound GO:0014070 1 0.055
cellular macromolecule catabolic process GO:0044265 363 0.055
positive regulation of biosynthetic process GO:0009891 336 0.054
macromolecule methylation GO:0043414 85 0.054
organophosphate metabolic process GO:0019637 597 0.054
protein localization to organelle GO:0033365 337 0.053
regulation of biological quality GO:0065008 391 0.052
cellular modified amino acid metabolic process GO:0006575 51 0.051
organic acid biosynthetic process GO:0016053 152 0.051
protein dna complex subunit organization GO:0071824 153 0.051
single organism cellular localization GO:1902580 375 0.050
cellular response to oxidative stress GO:0034599 94 0.049
macromolecule catabolic process GO:0009057 383 0.049
glycerophospholipid biosynthetic process GO:0046474 68 0.048
response to chemical GO:0042221 390 0.048
ribonucleoprotein complex assembly GO:0022618 143 0.047
protein transport GO:0015031 345 0.046
purine nucleotide metabolic process GO:0006163 376 0.046
ribonucleoside monophosphate metabolic process GO:0009161 265 0.045
ribonucleoprotein complex subunit organization GO:0071826 152 0.043
protein dna complex assembly GO:0065004 105 0.043
response to oxidative stress GO:0006979 99 0.043
cell communication GO:0007154 345 0.042
purine ribonucleoside metabolic process GO:0046128 380 0.041
covalent chromatin modification GO:0016569 119 0.041
protein methylation GO:0006479 48 0.041
nuclear transport GO:0051169 165 0.040
positive regulation of nucleic acid templated transcription GO:1903508 286 0.040
aromatic compound catabolic process GO:0019439 491 0.040
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.039
alpha amino acid metabolic process GO:1901605 124 0.037
nucleoside catabolic process GO:0009164 335 0.037
organic cyclic compound catabolic process GO:1901361 499 0.036
protein complex assembly GO:0006461 302 0.036
pyridine containing compound metabolic process GO:0072524 53 0.036
ribosomal large subunit assembly GO:0000027 35 0.035
cellular developmental process GO:0048869 191 0.035
nuclear transcribed mrna catabolic process GO:0000956 89 0.035
phospholipid biosynthetic process GO:0008654 89 0.035
glycosyl compound catabolic process GO:1901658 335 0.035
purine nucleoside metabolic process GO:0042278 380 0.034
negative regulation of cellular protein metabolic process GO:0032269 85 0.034
fungal type cell wall organization GO:0031505 145 0.034
methylation GO:0032259 101 0.034
posttranscriptional regulation of gene expression GO:0010608 115 0.034
purine nucleoside monophosphate metabolic process GO:0009126 262 0.033
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.033
single organism catabolic process GO:0044712 619 0.033
negative regulation of rna biosynthetic process GO:1902679 260 0.033
intracellular protein transport GO:0006886 319 0.033
cofactor metabolic process GO:0051186 126 0.032
purine containing compound metabolic process GO:0072521 400 0.032
ribonucleoside metabolic process GO:0009119 389 0.032
modification dependent macromolecule catabolic process GO:0043632 203 0.031
carbohydrate derivative biosynthetic process GO:1901137 181 0.031
nucleocytoplasmic transport GO:0006913 163 0.030
signaling GO:0023052 208 0.030
establishment of protein localization GO:0045184 367 0.030
establishment of organelle localization GO:0051656 96 0.029
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.029
polyadenylation dependent rna catabolic process GO:0043633 22 0.029
protein complex biogenesis GO:0070271 314 0.029
lipid metabolic process GO:0006629 269 0.029
positive regulation of rna biosynthetic process GO:1902680 286 0.028
organelle localization GO:0051640 128 0.028
negative regulation of gene expression GO:0010629 312 0.028
organelle assembly GO:0070925 118 0.028
dephosphorylation GO:0016311 127 0.027
positive regulation of gene expression GO:0010628 321 0.027
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.027
single organism nuclear import GO:1902593 56 0.027
vesicle mediated transport GO:0016192 335 0.027
protein complex localization GO:0031503 32 0.027
regulation of signal transduction GO:0009966 114 0.026
ribosomal subunit export from nucleus GO:0000054 46 0.026
response to extracellular stimulus GO:0009991 156 0.026
negative regulation of nucleic acid templated transcription GO:1903507 260 0.026
trna methylation GO:0030488 21 0.025
ribonucleotide metabolic process GO:0009259 377 0.025
glycosyl compound biosynthetic process GO:1901659 42 0.025
regulation of translation GO:0006417 89 0.025
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.025
ribonucleoside triphosphate catabolic process GO:0009203 327 0.025
negative regulation of protein metabolic process GO:0051248 85 0.024
nucleoside phosphate catabolic process GO:1901292 331 0.024
single organism carbohydrate metabolic process GO:0044723 237 0.023
negative regulation of transcription dna templated GO:0045892 258 0.023
internal protein amino acid acetylation GO:0006475 52 0.023
single organism developmental process GO:0044767 258 0.023
cell wall organization GO:0071555 146 0.023
protein import into nucleus GO:0006606 55 0.022
cellular response to external stimulus GO:0071496 150 0.022
signal transduction GO:0007165 208 0.022
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.022
trna metabolic process GO:0006399 151 0.022
developmental process GO:0032502 261 0.021
protein catabolic process GO:0030163 221 0.021
carbohydrate metabolic process GO:0005975 252 0.021
nuclear import GO:0051170 57 0.021
positive regulation of macromolecule metabolic process GO:0010604 394 0.020
localization within membrane GO:0051668 29 0.020
alpha amino acid biosynthetic process GO:1901607 91 0.020
response to organonitrogen compound GO:0010243 18 0.020
purine nucleoside triphosphate catabolic process GO:0009146 329 0.020
nucleotide catabolic process GO:0009166 330 0.020
oxidation reduction process GO:0055114 353 0.020
fungal type cell wall organization or biogenesis GO:0071852 169 0.020
dna recombination GO:0006310 172 0.020
cellular amide metabolic process GO:0043603 59 0.020
regulation of cell cycle GO:0051726 195 0.019
rrna containing ribonucleoprotein complex export from nucleus GO:0071428 46 0.019
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.019
regulation of translational elongation GO:0006448 25 0.018
organonitrogen compound catabolic process GO:1901565 404 0.018
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.018
response to external stimulus GO:0009605 158 0.018
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.018
protein modification by small protein conjugation or removal GO:0070647 172 0.018
rna phosphodiester bond hydrolysis GO:0090501 112 0.018
anatomical structure morphogenesis GO:0009653 160 0.018
coenzyme metabolic process GO:0006732 104 0.017
ribonucleotide catabolic process GO:0009261 327 0.017
regulation of protein modification process GO:0031399 110 0.017
multi organism reproductive process GO:0044703 216 0.017
nucleoside monophosphate biosynthetic process GO:0009124 33 0.017
chromatin silencing GO:0006342 147 0.017
cytoplasmic translation GO:0002181 65 0.017
cofactor biosynthetic process GO:0051188 80 0.017
cellular component disassembly GO:0022411 86 0.017
mapk cascade GO:0000165 30 0.016
lipid biosynthetic process GO:0008610 170 0.016
negative regulation of rna metabolic process GO:0051253 262 0.016
carboxylic acid transport GO:0046942 74 0.016
glycerolipid metabolic process GO:0046486 108 0.016
positive regulation of signal transduction GO:0009967 20 0.016
negative regulation of biosynthetic process GO:0009890 312 0.016
mitotic cell cycle process GO:1903047 294 0.016
peptidyl histidine modification GO:0018202 9 0.016
cellular homeostasis GO:0019725 138 0.016
regulation of signaling GO:0023051 119 0.016
meiotic cell cycle GO:0051321 272 0.016
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.016
purine nucleoside catabolic process GO:0006152 330 0.016
ribonucleoside biosynthetic process GO:0042455 37 0.016
purine ribonucleoside catabolic process GO:0046130 330 0.015
establishment of protein localization to organelle GO:0072594 278 0.015
organic hydroxy compound metabolic process GO:1901615 125 0.015
regulation of cellular component organization GO:0051128 334 0.015
external encapsulating structure organization GO:0045229 146 0.015
protein modification by small protein conjugation GO:0032446 144 0.015
cell differentiation GO:0030154 161 0.015
negative regulation of phosphate metabolic process GO:0045936 49 0.015
negative regulation of phosphorylation GO:0042326 28 0.015
carbohydrate derivative catabolic process GO:1901136 339 0.015
protein maturation GO:0051604 76 0.015
positive regulation of cellular component organization GO:0051130 116 0.015
negative regulation of phosphorus metabolic process GO:0010563 49 0.015
response to oxygen containing compound GO:1901700 61 0.015
trna processing GO:0008033 101 0.014
adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion GO:0000754 23 0.014
regulation of mitotic cell cycle phase transition GO:1901990 68 0.014
cellular amine metabolic process GO:0044106 51 0.014
regulation of phosphorus metabolic process GO:0051174 230 0.014
regulation of molecular function GO:0065009 320 0.014
regulation of cell communication GO:0010646 124 0.014
purine containing compound catabolic process GO:0072523 332 0.014
regulation of response to stimulus GO:0048583 157 0.014
ncrna 3 end processing GO:0043628 44 0.014
lipid localization GO:0010876 60 0.014
phospholipid metabolic process GO:0006644 125 0.014
regulation of hydrolase activity GO:0051336 133 0.014
cellular protein catabolic process GO:0044257 213 0.014
positive regulation of response to stimulus GO:0048584 37 0.014
ribonucleoside monophosphate biosynthetic process GO:0009156 31 0.014
ubiquitin dependent protein catabolic process GO:0006511 181 0.014
ribosomal large subunit export from nucleus GO:0000055 27 0.014
purine nucleoside monophosphate catabolic process GO:0009128 224 0.014
purine ribonucleotide catabolic process GO:0009154 327 0.014
single organism signaling GO:0044700 208 0.014
regulation of proteolysis GO:0030162 44 0.013
response to inorganic substance GO:0010035 47 0.013
hexose metabolic process GO:0019318 78 0.013
endosomal transport GO:0016197 86 0.013
nitrogen compound transport GO:0071705 212 0.013
rna splicing GO:0008380 131 0.013
conjugation with cellular fusion GO:0000747 106 0.013
glycerophospholipid metabolic process GO:0006650 98 0.013
protein localization to membrane GO:0072657 102 0.013
developmental process involved in reproduction GO:0003006 159 0.013
proteasomal protein catabolic process GO:0010498 141 0.013
chromatin assembly GO:0031497 35 0.013
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.013
stress activated protein kinase signaling cascade GO:0031098 4 0.012
nuclear export GO:0051168 124 0.012
regulation of anatomical structure size GO:0090066 50 0.012
organic anion transport GO:0015711 114 0.012
establishment of ribosome localization GO:0033753 46 0.012
positive regulation of nucleotide catabolic process GO:0030813 97 0.012
cellular protein complex assembly GO:0043623 209 0.012
negative regulation of protein modification process GO:0031400 37 0.012
death GO:0016265 30 0.012
nuclear polyadenylation dependent ncrna catabolic process GO:0071046 20 0.012
dna repair GO:0006281 236 0.012
positive regulation of intracellular signal transduction GO:1902533 16 0.012
organelle fission GO:0048285 272 0.012
establishment of protein localization to membrane GO:0090150 99 0.012
homeostatic process GO:0042592 227 0.012
regulation of phosphorylation GO:0042325 86 0.012
mitotic cell cycle GO:0000278 306 0.012
regulation of cell cycle process GO:0010564 150 0.012
translation GO:0006412 230 0.011
oxidoreduction coenzyme metabolic process GO:0006733 58 0.011
regulation of purine nucleotide metabolic process GO:1900542 109 0.011
mrna metabolic process GO:0016071 269 0.011
ribosome biogenesis GO:0042254 335 0.011
regulation of cell size GO:0008361 30 0.011
positive regulation of transcription dna templated GO:0045893 286 0.011
purine ribonucleoside biosynthetic process GO:0046129 31 0.011
chemical homeostasis GO:0048878 137 0.011
peptidyl diphthamide biosynthetic process from peptidyl histidine GO:0017183 7 0.011
pyridine nucleotide metabolic process GO:0019362 45 0.011
maturation of lsu rrna GO:0000470 39 0.011
ribonucleoside triphosphate metabolic process GO:0009199 356 0.011
vitamin metabolic process GO:0006766 41 0.011
positive regulation of gtp catabolic process GO:0033126 80 0.011
regulation of catabolic process GO:0009894 199 0.011
cellular protein complex localization GO:0034629 28 0.011
translational elongation GO:0006414 32 0.010
nucleus organization GO:0006997 62 0.010
ribonucleoprotein complex export from nucleus GO:0071426 46 0.010
amine metabolic process GO:0009308 51 0.010
maturation of lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000463 33 0.010
mitotic nuclear division GO:0007067 131 0.010
purine nucleoside triphosphate metabolic process GO:0009144 356 0.010
positive regulation of nucleotide metabolic process GO:0045981 101 0.010
atp catabolic process GO:0006200 224 0.010
cell development GO:0048468 107 0.010

EFM1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org