Saccharomyces cerevisiae

35 known processes

MSH4 (YFL003C)

Msh4p

MSH4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
meiosis i GO:0007127 92 0.987
reciprocal meiotic recombination GO:0007131 54 0.978
reciprocal dna recombination GO:0035825 54 0.966
meiotic nuclear division GO:0007126 163 0.942
dna recombination GO:0006310 172 0.935
synapsis GO:0007129 19 0.921
Mouse
nuclear division GO:0000280 263 0.911
organelle fission GO:0048285 272 0.888
chromosome organization involved in meiosis GO:0070192 32 0.881
Mouse
meiotic cell cycle process GO:1903046 229 0.875
meiotic cell cycle GO:0051321 272 0.782
positive regulation of macromolecule metabolic process GO:0010604 394 0.206
protein modification by small protein conjugation GO:0032446 144 0.192
regulation of protein metabolic process GO:0051246 237 0.185
macromolecule catabolic process GO:0009057 383 0.182
regulation of cellular protein metabolic process GO:0032268 232 0.155
cellular macromolecule catabolic process GO:0044265 363 0.145
synaptonemal complex assembly GO:0007130 12 0.132
regulation of dna metabolic process GO:0051052 100 0.114
heterocycle catabolic process GO:0046700 494 0.108
positive regulation of protein modification process GO:0031401 49 0.107
nucleobase containing compound catabolic process GO:0034655 479 0.103
chromosome segregation GO:0007059 159 0.093
regulation of cell cycle GO:0051726 195 0.093
aromatic compound catabolic process GO:0019439 491 0.092
mrna processing GO:0006397 185 0.087
protein sumoylation GO:0016925 17 0.083
positive regulation of cellular protein metabolic process GO:0032270 89 0.080
positive regulation of protein metabolic process GO:0051247 93 0.079
cell division GO:0051301 205 0.079
regulation of cell cycle process GO:0010564 150 0.077
nuclear transcribed mrna catabolic process GO:0000956 89 0.075
regulation of cellular component organization GO:0051128 334 0.075
nuclear export GO:0051168 124 0.073
synaptonemal complex organization GO:0070193 16 0.073
single organism catabolic process GO:0044712 619 0.072
organophosphate metabolic process GO:0019637 597 0.072
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.071
mrna metabolic process GO:0016071 269 0.066
organic cyclic compound catabolic process GO:1901361 499 0.064
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.064
single organism cellular localization GO:1902580 375 0.064
nucleobase containing small molecule metabolic process GO:0055086 491 0.063
cellular nitrogen compound catabolic process GO:0044270 494 0.062
regulation of cell division GO:0051302 113 0.059
mitotic cell cycle phase transition GO:0044772 141 0.059
dna replication GO:0006260 147 0.058
mitotic cell cycle GO:0000278 306 0.057
negative regulation of cell cycle GO:0045786 91 0.054
negative regulation of cellular metabolic process GO:0031324 407 0.050
nucleoside phosphate metabolic process GO:0006753 458 0.049
nucleocytoplasmic transport GO:0006913 163 0.046
regulation of organelle organization GO:0033043 243 0.045
regulation of meiosis GO:0040020 42 0.045
regulation of protein modification process GO:0031399 110 0.045
negative regulation of cellular biosynthetic process GO:0031327 312 0.044
organonitrogen compound catabolic process GO:1901565 404 0.043
protein modification by small protein conjugation or removal GO:0070647 172 0.042
negative regulation of macromolecule metabolic process GO:0010605 375 0.042
nucleobase containing compound transport GO:0015931 124 0.041
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.040
translation GO:0006412 230 0.039
carbohydrate derivative metabolic process GO:1901135 549 0.039
cellular response to chemical stimulus GO:0070887 315 0.038
nucleoside triphosphate metabolic process GO:0009141 364 0.038
nitrogen compound transport GO:0071705 212 0.037
mitotic cell cycle process GO:1903047 294 0.037
regulation of catabolic process GO:0009894 199 0.037
protein localization to organelle GO:0033365 337 0.037
organelle localization GO:0051640 128 0.037
rna localization GO:0006403 112 0.037
regulation of biological quality GO:0065008 391 0.036
nuclear transcribed mrna catabolic process deadenylation dependent decay GO:0000288 44 0.036
single organism carbohydrate metabolic process GO:0044723 237 0.036
nuclear transport GO:0051169 165 0.034
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.033
negative regulation of biosynthetic process GO:0009890 312 0.033
nucleoside phosphate biosynthetic process GO:1901293 80 0.033
regulation of translation GO:0006417 89 0.033
anatomical structure morphogenesis GO:0009653 160 0.033
cellular response to dna damage stimulus GO:0006974 287 0.033
regulation of meiotic cell cycle GO:0051445 43 0.032
sexual reproduction GO:0019953 216 0.031
Mouse
rna 3 end processing GO:0031123 88 0.030
chromatin organization GO:0006325 242 0.030
phosphorylation GO:0016310 291 0.029
regulation of phosphate metabolic process GO:0019220 230 0.029
rna transport GO:0050658 92 0.029
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.029
protein phosphorylation GO:0006468 197 0.029
translational initiation GO:0006413 56 0.029
signal transduction GO:0007165 208 0.028
negative regulation of organelle organization GO:0010639 103 0.028
developmental process involved in reproduction GO:0003006 159 0.028
Mouse
response to oxidative stress GO:0006979 99 0.028
cell communication GO:0007154 345 0.027
response to abiotic stimulus GO:0009628 159 0.027
response to chemical GO:0042221 390 0.027
developmental process GO:0032502 261 0.027
Mouse
negative regulation of cellular component organization GO:0051129 109 0.027
protein complex biogenesis GO:0070271 314 0.026
chromatin silencing GO:0006342 147 0.026
signaling GO:0023052 208 0.026
protein complex assembly GO:0006461 302 0.026
positive regulation of programmed cell death GO:0043068 3 0.026
sporulation GO:0043934 132 0.025
negative regulation of nuclear division GO:0051784 62 0.025
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.025
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.024
regulation of phosphorus metabolic process GO:0051174 230 0.024
chromosome localization GO:0050000 20 0.024
chemical homeostasis GO:0048878 137 0.024
positive regulation of protein modification by small protein conjugation or removal GO:1903322 12 0.024
nucleotide metabolic process GO:0009117 453 0.024
protein catabolic process GO:0030163 221 0.024
rna export from nucleus GO:0006405 88 0.024
dna dependent dna replication GO:0006261 115 0.024
single organism signaling GO:0044700 208 0.024
purine ribonucleotide metabolic process GO:0009150 372 0.024
establishment of rna localization GO:0051236 92 0.023
protein dna complex assembly GO:0065004 105 0.023
sister chromatid cohesion GO:0007062 49 0.023
regulation of localization GO:0032879 127 0.023
regulation of mitotic cell cycle phase transition GO:1901990 68 0.023
oxoacid metabolic process GO:0043436 351 0.023
homeostatic process GO:0042592 227 0.023
reproductive process in single celled organism GO:0022413 145 0.022
chromatin modification GO:0016568 200 0.022
cellular developmental process GO:0048869 191 0.022
regulation of protein modification by small protein conjugation or removal GO:1903320 29 0.022
vesicle mediated transport GO:0016192 335 0.022
glycosyl compound metabolic process GO:1901657 398 0.021
ion transport GO:0006811 274 0.021
purine containing compound metabolic process GO:0072521 400 0.021
meiotic dna double strand break formation GO:0042138 12 0.021
rna catabolic process GO:0006401 118 0.021
regulation of protein phosphorylation GO:0001932 75 0.021
multi organism process GO:0051704 233 0.020
Mouse
purine nucleoside metabolic process GO:0042278 380 0.020
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.020
negative regulation of cell cycle process GO:0010948 86 0.020
cell development GO:0048468 107 0.020
ribonucleoside metabolic process GO:0009119 389 0.019
negative regulation of cell division GO:0051782 66 0.019
negative regulation of mitotic cell cycle GO:0045930 63 0.019
cellular response to nutrient levels GO:0031669 144 0.019
regulation of mitotic cell cycle GO:0007346 107 0.019
cell cycle checkpoint GO:0000075 82 0.019
purine ribonucleoside catabolic process GO:0046130 330 0.019
glycosyl compound catabolic process GO:1901658 335 0.019
regulation of molecular function GO:0065009 320 0.018
multi organism reproductive process GO:0044703 216 0.018
Mouse
positive regulation of cell death GO:0010942 3 0.018
posttranscriptional regulation of gene expression GO:0010608 115 0.018
hexose metabolic process GO:0019318 78 0.018
nucleoside phosphate catabolic process GO:1901292 331 0.018
dna conformation change GO:0071103 98 0.018
nucleoside catabolic process GO:0009164 335 0.018
purine nucleotide metabolic process GO:0006163 376 0.018
dna repair GO:0006281 236 0.018
reproduction of a single celled organism GO:0032505 191 0.018
ribonucleoside triphosphate metabolic process GO:0009199 356 0.018
positive regulation of apoptotic process GO:0043065 3 0.018
organophosphate biosynthetic process GO:0090407 182 0.017
nucleoside metabolic process GO:0009116 394 0.017
meiotic chromosome segregation GO:0045132 31 0.017
regulation of dna dependent dna replication GO:0090329 37 0.017
purine nucleotide catabolic process GO:0006195 328 0.017
carboxylic acid metabolic process GO:0019752 338 0.017
positive regulation of nucleic acid templated transcription GO:1903508 286 0.017
intracellular signal transduction GO:0035556 112 0.016
regulation of dna replication GO:0006275 51 0.016
cellular response to osmotic stress GO:0071470 50 0.016
purine ribonucleoside metabolic process GO:0046128 380 0.016
ribonucleotide catabolic process GO:0009261 327 0.016
positive regulation of cellular biosynthetic process GO:0031328 336 0.016
establishment of organelle localization GO:0051656 96 0.016
response to organic substance GO:0010033 182 0.016
positive regulation of phosphorus metabolic process GO:0010562 147 0.016
purine nucleoside triphosphate catabolic process GO:0009146 329 0.016
positive regulation of rna metabolic process GO:0051254 294 0.016
filamentous growth of a population of unicellular organisms GO:0044182 109 0.015
reproductive process GO:0022414 248 0.015
Mouse
cellular protein catabolic process GO:0044257 213 0.015
organic acid metabolic process GO:0006082 352 0.015
protein transport GO:0015031 345 0.015
pseudohyphal growth GO:0007124 75 0.015
negative regulation of dna metabolic process GO:0051053 36 0.015
positive regulation of molecular function GO:0044093 185 0.015
protein dna complex subunit organization GO:0071824 153 0.015
negative regulation of mitotic cell cycle phase transition GO:1901991 57 0.015
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.015
nucleoside triphosphate catabolic process GO:0009143 329 0.015
organelle assembly GO:0070925 118 0.015
anion transport GO:0006820 145 0.015
ubiquitin dependent protein catabolic process GO:0006511 181 0.015
double strand break repair via synthesis dependent strand annealing GO:0045003 12 0.015
anatomical structure formation involved in morphogenesis GO:0048646 136 0.015
cellular response to organic substance GO:0071310 159 0.015
positive regulation of phosphate metabolic process GO:0045937 147 0.015
negative regulation of nucleic acid templated transcription GO:1903507 260 0.015
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.014
single organism developmental process GO:0044767 258 0.014
Mouse
cell cycle g2 m phase transition GO:0044839 39 0.014
cellular response to oxidative stress GO:0034599 94 0.014
sporulation resulting in formation of a cellular spore GO:0030435 129 0.014
lipid metabolic process GO:0006629 269 0.014
response to starvation GO:0042594 96 0.014
carbohydrate derivative catabolic process GO:1901136 339 0.014
lipid biosynthetic process GO:0008610 170 0.014
alcohol metabolic process GO:0006066 112 0.014
nucleic acid transport GO:0050657 94 0.014
regulation of catalytic activity GO:0050790 307 0.014
ascospore formation GO:0030437 107 0.014
purine nucleoside catabolic process GO:0006152 330 0.014
double strand break repair GO:0006302 105 0.014
cytoplasmic translation GO:0002181 65 0.014
regulation of dna recombination GO:0000018 24 0.013
cell differentiation GO:0030154 161 0.013
response to organic cyclic compound GO:0014070 1 0.013
cellular homeostasis GO:0019725 138 0.013
mrna catabolic process GO:0006402 93 0.013
purine nucleoside triphosphate metabolic process GO:0009144 356 0.013
cellular lipid metabolic process GO:0044255 229 0.013
regulation of cell cycle phase transition GO:1901987 70 0.013
negative regulation of rna biosynthetic process GO:1902679 260 0.013
organic hydroxy compound transport GO:0015850 41 0.013
mitochondrion organization GO:0007005 261 0.013
positive regulation of cellular component organization GO:0051130 116 0.013
cellular chemical homeostasis GO:0055082 123 0.013
cellular amine metabolic process GO:0044106 51 0.013
filamentous growth GO:0030447 124 0.013
positive regulation of organelle organization GO:0010638 85 0.013
response to extracellular stimulus GO:0009991 156 0.013
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.013
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.013
regulation of cellular catabolic process GO:0031329 195 0.013
regulation of meiosis i GO:0060631 14 0.013
cellular ketone metabolic process GO:0042180 63 0.013
regulation of nuclear division GO:0051783 103 0.013
positive regulation of rna biosynthetic process GO:1902680 286 0.013
amine metabolic process GO:0009308 51 0.013
cellular response to extracellular stimulus GO:0031668 150 0.013
negative regulation of gene expression GO:0010629 312 0.013
double strand break repair via homologous recombination GO:0000724 54 0.013
organophosphate catabolic process GO:0046434 338 0.013
transmembrane transport GO:0055085 349 0.012
trna metabolic process GO:0006399 151 0.012
ribose phosphate metabolic process GO:0019693 384 0.012
single organism reproductive process GO:0044702 159 0.012
Mouse
establishment of protein localization GO:0045184 367 0.012
mitotic nuclear division GO:0007067 131 0.012
cation transport GO:0006812 166 0.012
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.012
response to nutrient levels GO:0031667 150 0.012
atp catabolic process GO:0006200 224 0.012
regulation of phosphorylation GO:0042325 86 0.012
negative regulation of transcription dna templated GO:0045892 258 0.012
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.012
positive regulation of catabolic process GO:0009896 135 0.012
cellular response to starvation GO:0009267 90 0.012
regulation of metal ion transport GO:0010959 2 0.012
negative regulation of meiotic cell cycle GO:0051447 24 0.012
purine ribonucleotide catabolic process GO:0009154 327 0.012
ribonucleotide metabolic process GO:0009259 377 0.012
detection of carbohydrate stimulus GO:0009730 3 0.012
ncrna processing GO:0034470 330 0.012
cellular ion homeostasis GO:0006873 112 0.012
detection of stimulus GO:0051606 4 0.011
purine nucleoside monophosphate metabolic process GO:0009126 262 0.011
nucleoside monophosphate metabolic process GO:0009123 267 0.011
chromatin silencing at telomere GO:0006348 84 0.011
positive regulation of cell cycle process GO:0090068 31 0.011
cellular carbohydrate metabolic process GO:0044262 135 0.011
macromolecule methylation GO:0043414 85 0.011
g2 m transition of mitotic cell cycle GO:0000086 38 0.011
dna integrity checkpoint GO:0031570 41 0.011
glucose metabolic process GO:0006006 65 0.011
cellular response to abiotic stimulus GO:0071214 62 0.011
cellular amide metabolic process GO:0043603 59 0.011
positive regulation of intracellular transport GO:0032388 4 0.011
protein localization to chromosome GO:0034502 28 0.011
proteolysis GO:0006508 268 0.011
endocytosis GO:0006897 90 0.011
cell growth GO:0016049 89 0.011
cellular amino acid metabolic process GO:0006520 225 0.011
regulation of cellular ketone metabolic process GO:0010565 42 0.011
regulation of cellular localization GO:0060341 50 0.011
recombinational repair GO:0000725 64 0.011
response to osmotic stress GO:0006970 83 0.010
positive regulation of gene expression GO:0010628 321 0.010
negative regulation of rna metabolic process GO:0051253 262 0.010
positive regulation of cellular catabolic process GO:0031331 128 0.010
positive regulation of cytoplasmic transport GO:1903651 4 0.010
regulation of transport GO:0051049 85 0.010
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.010
covalent chromatin modification GO:0016569 119 0.010
regulation of signaling GO:0023051 119 0.010
multi organism cellular process GO:0044764 120 0.010
gene silencing GO:0016458 151 0.010
ribonucleoside catabolic process GO:0042454 332 0.010
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.010
anatomical structure development GO:0048856 160 0.010
Mouse
carbohydrate transport GO:0008643 33 0.010
negative regulation of phosphorus metabolic process GO:0010563 49 0.010
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.010
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.010
positive regulation of dna metabolic process GO:0051054 26 0.010
organic hydroxy compound metabolic process GO:1901615 125 0.010
detection of glucose GO:0051594 3 0.010
regulation of hydrolase activity GO:0051336 133 0.010

MSH4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.017