Saccharomyces cerevisiae

72 known processes

NAB3 (YPL190C)

Nab3p

(Aliases: HMD1)

NAB3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
mrna metabolic process GO:0016071 269 0.876
ncrna processing GO:0034470 330 0.873
rna modification GO:0009451 99 0.849
nuclear transcribed mrna catabolic process GO:0000956 89 0.835
cellular nitrogen compound catabolic process GO:0044270 494 0.692
mrna catabolic process GO:0006402 93 0.681
snrna metabolic process GO:0016073 25 0.679
heterocycle catabolic process GO:0046700 494 0.660
aromatic compound catabolic process GO:0019439 491 0.630
organic cyclic compound catabolic process GO:1901361 499 0.620
rna catabolic process GO:0006401 118 0.619
snorna metabolic process GO:0016074 40 0.588
macromolecule catabolic process GO:0009057 383 0.434
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.415
ncrna 3 end processing GO:0043628 44 0.413
dna templated transcription termination GO:0006353 42 0.395
cut catabolic process GO:0071034 12 0.391
rna polyadenylation GO:0043631 26 0.390
snorna processing GO:0043144 34 0.378
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.365
nuclear mrna surveillance GO:0071028 22 0.355
negative regulation of rna metabolic process GO:0051253 262 0.341
ncrna catabolic process GO:0034661 33 0.338
nucleobase containing compound catabolic process GO:0034655 479 0.308
negative regulation of cellular biosynthetic process GO:0031327 312 0.304
cellular macromolecule catabolic process GO:0044265 363 0.298
rna 3 end processing GO:0031123 88 0.285
snrna processing GO:0016180 17 0.282
snrna 3 end processing GO:0034472 16 0.281
trna metabolic process GO:0006399 151 0.278
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.277
rrna metabolic process GO:0016072 244 0.272
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.270
response to chemical GO:0042221 390 0.264
negative regulation of biosynthetic process GO:0009890 312 0.261
positive regulation of rna metabolic process GO:0051254 294 0.254
negative regulation of gene expression GO:0010629 312 0.248
negative regulation of cellular metabolic process GO:0031324 407 0.239
rna surveillance GO:0071025 30 0.237
trna processing GO:0008033 101 0.217
termination of rna polymerase ii transcription GO:0006369 26 0.199
positive regulation of rna biosynthetic process GO:1902680 286 0.196
positive regulation of biosynthetic process GO:0009891 336 0.195
mrna 3 end processing GO:0031124 54 0.195
cut metabolic process GO:0071043 12 0.187
ribosome biogenesis GO:0042254 335 0.170
negative regulation of macromolecule metabolic process GO:0010605 375 0.169
mrna processing GO:0006397 185 0.148
cell cycle phase transition GO:0044770 144 0.141
negative regulation of transcription dna templated GO:0045892 258 0.138
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 109 0.133
response to external stimulus GO:0009605 158 0.130
lipid metabolic process GO:0006629 269 0.130
negative regulation of rna biosynthetic process GO:1902679 260 0.129
regulation of biological quality GO:0065008 391 0.128
Human
protein dna complex subunit organization GO:0071824 153 0.127
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.124
dna dependent dna replication GO:0006261 115 0.124
cell cycle g2 m phase transition GO:0044839 39 0.119
positive regulation of transcription dna templated GO:0045893 286 0.117
termination of rna polymerase ii transcription exosome dependent GO:0030847 10 0.115
protein localization to organelle GO:0033365 337 0.113
cellular response to external stimulus GO:0071496 150 0.109
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.101
maintenance of location in cell GO:0051651 58 0.097
negative regulation of nucleic acid templated transcription GO:1903507 260 0.093
organophosphate metabolic process GO:0019637 597 0.091
developmental process GO:0032502 261 0.089
Human
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.082
positive regulation of gene expression GO:0010628 321 0.082
protein ubiquitination GO:0016567 118 0.075
growth GO:0040007 157 0.075
cellular response to extracellular stimulus GO:0031668 150 0.074
cellular response to nutrient levels GO:0031669 144 0.073
single organism developmental process GO:0044767 258 0.070
Human
reproductive process GO:0022414 248 0.070
positive regulation of cellular biosynthetic process GO:0031328 336 0.069
anatomical structure morphogenesis GO:0009653 160 0.065
chromatin modification GO:0016568 200 0.065
Human
protein modification by small protein conjugation GO:0032446 144 0.064
ribonucleoside monophosphate metabolic process GO:0009161 265 0.064
maintenance of protein location GO:0045185 53 0.063
chromatin organization GO:0006325 242 0.063
Human
transcription initiation from rna polymerase ii promoter GO:0006367 55 0.062
regulation of cellular component organization GO:0051128 334 0.062
regulation of cellular catabolic process GO:0031329 195 0.059
purine nucleoside metabolic process GO:0042278 380 0.058
nucleobase containing small molecule metabolic process GO:0055086 491 0.057
single organism catabolic process GO:0044712 619 0.057
regulation of gene silencing GO:0060968 41 0.055
nuclear transport GO:0051169 165 0.054
mitochondrion organization GO:0007005 261 0.053
g2 m transition of mitotic cell cycle GO:0000086 38 0.052
cellular lipid metabolic process GO:0044255 229 0.052
positive regulation of macromolecule metabolic process GO:0010604 394 0.051
negative regulation of catabolic process GO:0009895 43 0.050
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.050
mitotic cell cycle phase transition GO:0044772 141 0.049
mitotic cell cycle process GO:1903047 294 0.049
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.048
organelle assembly GO:0070925 118 0.048
ribonucleoprotein complex subunit organization GO:0071826 152 0.047
rrna pseudouridine synthesis GO:0031118 4 0.047
response to extracellular stimulus GO:0009991 156 0.046
maintenance of location GO:0051235 66 0.046
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.045
g1 s transition of mitotic cell cycle GO:0000082 64 0.045
protein complex assembly GO:0006461 302 0.045
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.044
cellular response to chemical stimulus GO:0070887 315 0.044
protein dna complex assembly GO:0065004 105 0.043
positive regulation of nucleic acid templated transcription GO:1903508 286 0.043
regulation of gene expression epigenetic GO:0040029 147 0.043
regulation of transport GO:0051049 85 0.043
response to nutrient GO:0007584 52 0.043
rna splicing via transesterification reactions GO:0000375 118 0.042
ribonucleoprotein complex assembly GO:0022618 143 0.042
meiotic nuclear division GO:0007126 163 0.042
single organism membrane organization GO:0044802 275 0.042
cytoskeleton organization GO:0007010 230 0.042
meiotic cell cycle process GO:1903046 229 0.041
rrna modification GO:0000154 19 0.041
protein localization to nucleus GO:0034504 74 0.040
rrna processing GO:0006364 227 0.040
regulation of catabolic process GO:0009894 199 0.040
lipid biosynthetic process GO:0008610 170 0.040
vesicle mediated transport GO:0016192 335 0.040
response to temperature stimulus GO:0009266 74 0.039
glycosyl compound metabolic process GO:1901657 398 0.039
regulation of cellular component biogenesis GO:0044087 112 0.039
translation GO:0006412 230 0.039
nucleocytoplasmic transport GO:0006913 163 0.038
methylation GO:0032259 101 0.037
positive regulation of gene expression epigenetic GO:0045815 25 0.037
nucleoside monophosphate metabolic process GO:0009123 267 0.037
dna replication initiation GO:0006270 48 0.037
glycerolipid metabolic process GO:0046486 108 0.037
negative regulation of cellular component organization GO:0051129 109 0.036
nucleotide metabolic process GO:0009117 453 0.036
rna splicing GO:0008380 131 0.036
cellular response to nutrient GO:0031670 50 0.035
response to nutrient levels GO:0031667 150 0.035
cellular homeostasis GO:0019725 138 0.035
rna polymerase ii transcriptional preinitiation complex assembly GO:0051123 40 0.034
macromolecule methylation GO:0043414 85 0.034
oxoacid metabolic process GO:0043436 351 0.034
cellular ion homeostasis GO:0006873 112 0.034
carbohydrate derivative metabolic process GO:1901135 549 0.034
regulation of protein metabolic process GO:0051246 237 0.034
negative regulation of protein metabolic process GO:0051248 85 0.034
carboxylic acid metabolic process GO:0019752 338 0.033
regulation of cellular protein metabolic process GO:0032268 232 0.032
atp metabolic process GO:0046034 251 0.032
chemical homeostasis GO:0048878 137 0.032
reproductive process in single celled organism GO:0022413 145 0.032
nucleic acid transport GO:0050657 94 0.032
anatomical structure formation involved in morphogenesis GO:0048646 136 0.032
dna replication GO:0006260 147 0.032
anatomical structure development GO:0048856 160 0.031
multi organism process GO:0051704 233 0.031
chromatin silencing GO:0006342 147 0.031
nucleobase containing compound transport GO:0015931 124 0.031
cellular component disassembly GO:0022411 86 0.031
regulation of transcription from rna polymerase ii promoter in response to stress GO:0043618 51 0.031
negative regulation of gene expression epigenetic GO:0045814 147 0.030
response to organic cyclic compound GO:0014070 1 0.030
pseudouridine synthesis GO:0001522 13 0.030
modification dependent protein catabolic process GO:0019941 181 0.029
oxidation reduction process GO:0055114 353 0.029
gene silencing GO:0016458 151 0.029
dna conformation change GO:0071103 98 0.029
dna recombination GO:0006310 172 0.029
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.028
cellular chemical homeostasis GO:0055082 123 0.028
nucleoside phosphate metabolic process GO:0006753 458 0.028
cell communication GO:0007154 345 0.028
regulation of chromosome organization GO:0033044 66 0.028
microtubule cytoskeleton organization GO:0000226 109 0.028
homeostatic process GO:0042592 227 0.027
positive regulation of cellular component organization GO:0051130 116 0.027
ion transport GO:0006811 274 0.027
cellular respiration GO:0045333 82 0.027
fatty acid metabolic process GO:0006631 51 0.026
cellular amine metabolic process GO:0044106 51 0.026
response to abiotic stimulus GO:0009628 159 0.026
regulation of localization GO:0032879 127 0.025
cellular response to organic substance GO:0071310 159 0.025
protein complex biogenesis GO:0070271 314 0.025
purine ribonucleoside metabolic process GO:0046128 380 0.025
cellular component morphogenesis GO:0032989 97 0.025
cellular developmental process GO:0048869 191 0.025
Human
purine ribonucleotide metabolic process GO:0009150 372 0.025
chromosome segregation GO:0007059 159 0.025
negative regulation of gene silencing GO:0060969 27 0.024
ribonucleoside metabolic process GO:0009119 389 0.024
purine nucleoside monophosphate metabolic process GO:0009126 262 0.024
metal ion homeostasis GO:0055065 79 0.024
dna templated transcription initiation GO:0006352 71 0.024
nucleoside metabolic process GO:0009116 394 0.024
modification dependent macromolecule catabolic process GO:0043632 203 0.024
regulation of dna dependent dna replication initiation GO:0030174 21 0.023
multi organism reproductive process GO:0044703 216 0.023
posttranscriptional regulation of gene expression GO:0010608 115 0.023
Human
regulation of dna dependent dna replication GO:0090329 37 0.023
negative regulation of cell communication GO:0010648 33 0.023
negative regulation of cellular protein metabolic process GO:0032269 85 0.023
regulation of translation GO:0006417 89 0.023
protein modification by small protein conjugation or removal GO:0070647 172 0.023
positive regulation of molecular function GO:0044093 185 0.023
purine nucleoside triphosphate metabolic process GO:0009144 356 0.023
organophosphate biosynthetic process GO:0090407 182 0.023
purine containing compound metabolic process GO:0072521 400 0.022
nuclear rna surveillance GO:0071027 30 0.022
sporulation resulting in formation of a cellular spore GO:0030435 129 0.022
nucleoside monophosphate catabolic process GO:0009125 224 0.022
organic hydroxy compound metabolic process GO:1901615 125 0.022
nucleoside triphosphate metabolic process GO:0009141 364 0.022
reproduction of a single celled organism GO:0032505 191 0.022
developmental process involved in reproduction GO:0003006 159 0.021
rna localization GO:0006403 112 0.021
vacuole organization GO:0007033 75 0.021
regulation of cellular ketone metabolic process GO:0010565 42 0.021
regulation of protein complex assembly GO:0043254 77 0.021
positive regulation of mrna processing GO:0050685 3 0.021
negative regulation of cellular catabolic process GO:0031330 43 0.021
ribonucleotide metabolic process GO:0009259 377 0.021
cellular ketone metabolic process GO:0042180 63 0.021
cellular response to starvation GO:0009267 90 0.021
microtubule organizing center organization GO:0031023 33 0.021
negative regulation of chromatin silencing GO:0031936 25 0.020
generation of precursor metabolites and energy GO:0006091 147 0.020
amine metabolic process GO:0009308 51 0.020
mitotic cell cycle GO:0000278 306 0.020
carboxylic acid biosynthetic process GO:0046394 152 0.020
nitrogen compound transport GO:0071705 212 0.020
protein import GO:0017038 122 0.020
nitrogen utilization GO:0019740 21 0.020
monocarboxylic acid metabolic process GO:0032787 122 0.020
sporulation GO:0043934 132 0.020
organic anion transport GO:0015711 114 0.020
positive regulation of organelle organization GO:0010638 85 0.020
signaling GO:0023052 208 0.019
protein catabolic process GO:0030163 221 0.019
nuclear transcribed mrna catabolic process deadenylation dependent decay GO:0000288 44 0.019
small molecule catabolic process GO:0044282 88 0.019
sexual sporulation GO:0034293 113 0.019
mrna transport GO:0051028 60 0.019
ribonucleoside monophosphate catabolic process GO:0009158 224 0.018
ribonucleoprotein complex export from nucleus GO:0071426 46 0.018
glycerophospholipid metabolic process GO:0006650 98 0.018
chromatin silencing at rdna GO:0000183 32 0.018
chromatin remodeling GO:0006338 80 0.018
Human
purine nucleoside triphosphate catabolic process GO:0009146 329 0.018
purine nucleotide metabolic process GO:0006163 376 0.018
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 36 0.018
response to oxygen containing compound GO:1901700 61 0.018
positive regulation of sodium ion transport by positive regulation of transcription from rna polymerase ii promoter GO:0061423 1 0.018
cellular cation homeostasis GO:0030003 100 0.017
organelle fission GO:0048285 272 0.017
regulation of protein maturation GO:1903317 34 0.017
signal transduction GO:0007165 208 0.017
single organism reproductive process GO:0044702 159 0.017
single organism carbohydrate metabolic process GO:0044723 237 0.017
sister chromatid segregation GO:0000819 93 0.017
cellular response to oxidative stress GO:0034599 94 0.017
aerobic respiration GO:0009060 55 0.017
cellular protein catabolic process GO:0044257 213 0.017
protein methylation GO:0006479 48 0.017
mrna polyadenylation GO:0006378 20 0.017
phosphorylation GO:0016310 291 0.016
covalent chromatin modification GO:0016569 119 0.016
sexual reproduction GO:0019953 216 0.016
positive regulation of fatty acid beta oxidation GO:0032000 3 0.016
response to heat GO:0009408 69 0.016
fungal type cell wall organization GO:0031505 145 0.016
chromatin assembly or disassembly GO:0006333 60 0.016
cell cycle g1 s phase transition GO:0044843 64 0.016
regulation of dna templated transcription in response to stress GO:0043620 51 0.016
stress granule assembly GO:0034063 8 0.016
cellular amino acid metabolic process GO:0006520 225 0.016
atp catabolic process GO:0006200 224 0.016
positive regulation of intracellular protein transport GO:0090316 3 0.016
cation homeostasis GO:0055080 105 0.016
regulation of dna templated transcription initiation GO:2000142 19 0.016
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.016
glycerolipid biosynthetic process GO:0045017 71 0.016
rna transport GO:0050658 92 0.016
organonitrogen compound catabolic process GO:1901565 404 0.015
telomere maintenance GO:0000723 74 0.015
nuclear division GO:0000280 263 0.015
establishment of rna localization GO:0051236 92 0.015
regulation of metal ion transport GO:0010959 2 0.015
regulation of molecular function GO:0065009 320 0.015
response to starvation GO:0042594 96 0.015
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.015
antisense rna metabolic process GO:0042868 8 0.015
cellular amino acid biosynthetic process GO:0008652 118 0.015
regulation of transcription initiation from rna polymerase ii promoter GO:0060260 19 0.015
cell cycle checkpoint GO:0000075 82 0.015
protein alkylation GO:0008213 48 0.015
regulation of cellular amino acid metabolic process GO:0006521 16 0.015
regulation of proteolysis GO:0030162 44 0.015
purine ribonucleoside catabolic process GO:0046130 330 0.015
response to calcium ion GO:0051592 1 0.015
histone modification GO:0016570 119 0.015
regulation of signaling GO:0023051 119 0.015
regulation of transcription involved in g1 s transition of mitotic cell cycle GO:0000083 27 0.014
microtubule based process GO:0007017 117 0.014
ribose phosphate metabolic process GO:0019693 384 0.014
cellular response to hypoxia GO:0071456 4 0.014
positive regulation of transport GO:0051050 32 0.014
mrna splicing via spliceosome GO:0000398 108 0.014
cellular component assembly involved in morphogenesis GO:0010927 73 0.014
organonitrogen compound biosynthetic process GO:1901566 314 0.014
response to hypoxia GO:0001666 4 0.014
regulation of protein processing GO:0070613 34 0.014
organic acid catabolic process GO:0016054 71 0.014
protein processing GO:0016485 64 0.014
regulation of cellular amine metabolic process GO:0033238 21 0.014
positive regulation of intracellular transport GO:0032388 4 0.014
positive regulation of catalytic activity GO:0043085 178 0.014
regulation of cellular component size GO:0032535 50 0.014
telomere organization GO:0032200 75 0.014
alcohol biosynthetic process GO:0046165 75 0.014
positive regulation of transcription from rna polymerase ii promoter by oleic acid GO:0061429 4 0.014
positive regulation of programmed cell death GO:0043068 3 0.014
positive regulation of sodium ion transport GO:0010765 1 0.013
regulation of chromatin silencing GO:0031935 39 0.013
nucleoside triphosphate catabolic process GO:0009143 329 0.013
response to organic substance GO:0010033 182 0.013
organelle fusion GO:0048284 85 0.013
chromatin assembly GO:0031497 35 0.013
response to inorganic substance GO:0010035 47 0.013
external encapsulating structure organization GO:0045229 146 0.013
meiosis i GO:0007127 92 0.013
regulation of lipid metabolic process GO:0019216 45 0.013
alcohol metabolic process GO:0006066 112 0.013
maintenance of protein location in cell GO:0032507 50 0.013
cation transport GO:0006812 166 0.013
membrane organization GO:0061024 276 0.013
proteolysis GO:0006508 268 0.013
cellular metal ion homeostasis GO:0006875 78 0.013
positive regulation of nucleocytoplasmic transport GO:0046824 4 0.013
transition metal ion homeostasis GO:0055076 59 0.013
atp dependent chromatin remodeling GO:0043044 36 0.013
Human
dna repair GO:0006281 236 0.013
histone methylation GO:0016571 28 0.013
ribonucleoside catabolic process GO:0042454 332 0.013
snorna 3 end processing GO:0031126 21 0.013
purine nucleotide catabolic process GO:0006195 328 0.013
regulation of mitotic cell cycle phase transition GO:1901990 68 0.012
ubiquitin dependent protein catabolic process GO:0006511 181 0.012
positive regulation of cytoplasmic transport GO:1903651 4 0.012
glycerophospholipid biosynthetic process GO:0046474 68 0.012
regulation of rna splicing GO:0043484 3 0.012
regulation of mrna splicing via spliceosome GO:0048024 3 0.012
positive regulation of cell cycle process GO:0090068 31 0.012
negative regulation of pseudohyphal growth GO:2000221 8 0.012
positive regulation of cell death GO:0010942 3 0.012
organic acid metabolic process GO:0006082 352 0.012
negative regulation of signaling GO:0023057 30 0.012
positive regulation of lipid catabolic process GO:0050996 4 0.012
regulation of transcription factor import into nucleus GO:0042990 4 0.012
rna export from nucleus GO:0006405 88 0.012
protein complex disassembly GO:0043241 70 0.012
phospholipid biosynthetic process GO:0008654 89 0.012
ascospore formation GO:0030437 107 0.012
cellular modified amino acid metabolic process GO:0006575 51 0.012
proteasomal protein catabolic process GO:0010498 141 0.012
regulation of sodium ion transport GO:0002028 1 0.012
response to oxidative stress GO:0006979 99 0.012
negative regulation of chromosome organization GO:2001251 39 0.012
cell division GO:0051301 205 0.011
carbon catabolite regulation of transcription from rna polymerase ii promoter GO:0000429 34 0.011
aging GO:0007568 71 0.011
carbohydrate derivative biosynthetic process GO:1901137 181 0.011
regulation of protein catabolic process GO:0042176 40 0.011
nuclear polyadenylation dependent cut catabolic process GO:0071039 10 0.011
secretion GO:0046903 50 0.011
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.011
regulation of fatty acid beta oxidation GO:0031998 3 0.011
positive regulation of response to drug GO:2001025 3 0.011
regulation of dna metabolic process GO:0051052 100 0.011
maturation of ssu rrna GO:0030490 105 0.011
positive regulation of cellular response to drug GO:2001040 3 0.011
positive regulation of fatty acid oxidation GO:0046321 3 0.011
establishment or maintenance of cell polarity GO:0007163 96 0.011
nuclear export GO:0051168 124 0.011
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.011
carbohydrate catabolic process GO:0016052 77 0.011
mrna export from nucleus GO:0006406 60 0.011
regulation of response to stimulus GO:0048583 157 0.011
regulation of anatomical structure size GO:0090066 50 0.011
histone deacetylation GO:0016575 26 0.011
cell aging GO:0007569 70 0.011
regulation of protein modification process GO:0031399 110 0.011
protein ubiquitination involved in ubiquitin dependent protein catabolic process GO:0042787 26 0.011
intracellular signal transduction GO:0035556 112 0.011
regulation of cellular localization GO:0060341 50 0.011
single organism signaling GO:0044700 208 0.011
regulation of cell cycle phase transition GO:1901987 70 0.011
purine containing compound catabolic process GO:0072523 332 0.011
regulation of lipid biosynthetic process GO:0046890 32 0.011
negative regulation of cell cycle phase transition GO:1901988 59 0.010
nucleoside catabolic process GO:0009164 335 0.010
ribonucleoside triphosphate metabolic process GO:0009199 356 0.010
phospholipid metabolic process GO:0006644 125 0.010
rrna transcription GO:0009303 31 0.010
nucleotide catabolic process GO:0009166 330 0.010
regulation of response to drug GO:2001023 3 0.010
cell development GO:0048468 107 0.010
positive regulation of transcription involved in g2 m transition of mitotic cell cycle GO:0090282 4 0.010
cellular response to endogenous stimulus GO:0071495 22 0.010
negative regulation of transcription from rna polymerase ii promoter in response to uv induced dna damage GO:0010768 1 0.010
positive regulation of dna templated transcription initiation GO:2000144 13 0.010
anatomical structure homeostasis GO:0060249 74 0.010

NAB3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.013