Saccharomyces cerevisiae

54 known processes

PUB1 (YNL016W)

Pub1p

(Aliases: RNP1)

PUB1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
mrna metabolic process GO:0016071 269 0.996
nuclear transcribed mrna catabolic process GO:0000956 89 0.986
translation GO:0006412 230 0.963
Mouse
mrna catabolic process GO:0006402 93 0.944
mrna processing GO:0006397 185 0.920
Human Yeast Fly
rna localization GO:0006403 112 0.786
translational initiation GO:0006413 56 0.784
negative regulation of macromolecule metabolic process GO:0010605 375 0.658
Mouse
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.607
Mouse
heterocycle catabolic process GO:0046700 494 0.573
regulation of translational initiation GO:0006446 18 0.568
negative regulation of gene expression GO:0010629 312 0.548
Mouse
gene silencing GO:0016458 151 0.542
rna 3 end processing GO:0031123 88 0.521
positive regulation of macromolecule metabolic process GO:0010604 394 0.508
Yeast
developmental process GO:0032502 261 0.416
Mouse Worm
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.404
regulation of protein metabolic process GO:0051246 237 0.377
Mouse
cellular nitrogen compound catabolic process GO:0044270 494 0.375
positive regulation of rna metabolic process GO:0051254 294 0.373
Yeast
negative regulation of cellular metabolic process GO:0031324 407 0.357
Mouse
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.355
Yeast
positive regulation of biosynthetic process GO:0009891 336 0.344
cellular macromolecule catabolic process GO:0044265 363 0.326
ribonucleoprotein complex assembly GO:0022618 143 0.319
posttranscriptional regulation of gene expression GO:0010608 115 0.311
mrna transport GO:0051028 60 0.311
regulation of mitotic cell cycle GO:0007346 107 0.308
nucleic acid transport GO:0050657 94 0.305
regulation of gene expression epigenetic GO:0040029 147 0.297
stress granule assembly GO:0034063 8 0.290
regulation of translation GO:0006417 89 0.288
Mouse
negative regulation of cellular biosynthetic process GO:0031327 312 0.286
Mouse
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.281
Mouse
mrna 3 end processing GO:0031124 54 0.276
rna splicing GO:0008380 131 0.276
Human Yeast Fly
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 109 0.275
Human Yeast Fly
positive regulation of rna biosynthetic process GO:1902680 286 0.269
mrna splicing via spliceosome GO:0000398 108 0.256
Human Yeast Fly
nuclear transcribed mrna catabolic process deadenylation dependent decay GO:0000288 44 0.252
rna catabolic process GO:0006401 118 0.250
nucleobase containing compound catabolic process GO:0034655 479 0.225
organic cyclic compound catabolic process GO:1901361 499 0.218
aromatic compound catabolic process GO:0019439 491 0.213
developmental process involved in reproduction GO:0003006 159 0.195
Mouse
single organism developmental process GO:0044767 258 0.191
Mouse Worm
nitrogen compound transport GO:0071705 212 0.188
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.184
mrna export from nucleus GO:0006406 60 0.180
regulation of cellular protein metabolic process GO:0032268 232 0.180
Mouse
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.177
Yeast
macromolecule catabolic process GO:0009057 383 0.171
nuclear transport GO:0051169 165 0.157
positive regulation of transcription dna templated GO:0045893 286 0.143
snorna processing GO:0043144 34 0.140
negative regulation of biosynthetic process GO:0009890 312 0.140
Mouse
establishment of rna localization GO:0051236 92 0.138
response to external stimulus GO:0009605 158 0.134
negative regulation of transcription dna templated GO:0045892 258 0.128
mitotic cell cycle phase transition GO:0044772 141 0.127
regulation of biological quality GO:0065008 391 0.127
positive regulation of gene expression GO:0010628 321 0.124
Yeast
organelle localization GO:0051640 128 0.117
cell division GO:0051301 205 0.113
Mouse
nucleocytoplasmic transport GO:0006913 163 0.106
single organism cellular localization GO:1902580 375 0.097
single organism reproductive process GO:0044702 159 0.096
Mouse
negative regulation of nucleic acid templated transcription GO:1903507 260 0.095
positive regulation of cellular catabolic process GO:0031331 128 0.091
cellular response to dna damage stimulus GO:0006974 287 0.089
nuclear export GO:0051168 124 0.084
trna metabolic process GO:0006399 151 0.082
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.078
single organism catabolic process GO:0044712 619 0.075
rna transport GO:0050658 92 0.075
ncrna 3 end processing GO:0043628 44 0.072
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.071
rna splicing via transesterification reactions GO:0000375 118 0.071
Human Yeast Fly
chromatin organization GO:0006325 242 0.070
negative regulation of rna metabolic process GO:0051253 262 0.070
cell cycle checkpoint GO:0000075 82 0.070
purine ribonucleoside metabolic process GO:0046128 380 0.070
mitochondrion organization GO:0007005 261 0.068
Yeast
positive regulation of catabolic process GO:0009896 135 0.067
positive regulation of molecular function GO:0044093 185 0.066
nuclear division GO:0000280 263 0.064
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.064
mitotic cell cycle process GO:1903047 294 0.063
regulation of cellular catabolic process GO:0031329 195 0.062
response to abiotic stimulus GO:0009628 159 0.060
regulation of mitotic cell cycle phase transition GO:1901990 68 0.060
generation of precursor metabolites and energy GO:0006091 147 0.058
regulation of chromatin silencing GO:0031935 39 0.056
ribonucleoprotein complex subunit organization GO:0071826 152 0.055
regulation of molecular function GO:0065009 320 0.055
regulation of cell cycle GO:0051726 195 0.054
aerobic respiration GO:0009060 55 0.054
snorna metabolic process GO:0016074 40 0.053
positive regulation of cellular biosynthetic process GO:0031328 336 0.052
meiotic cell cycle GO:0051321 272 0.050
regulation of cell cycle phase transition GO:1901987 70 0.049
cellular response to chemical stimulus GO:0070887 315 0.048
regulation of organelle organization GO:0033043 243 0.045
regulation of cellular component organization GO:0051128 334 0.045
homeostatic process GO:0042592 227 0.043
organic acid metabolic process GO:0006082 352 0.042
nucleobase containing compound transport GO:0015931 124 0.041
dna conformation change GO:0071103 98 0.040
negative regulation of protein metabolic process GO:0051248 85 0.040
Mouse
regulation of cell division GO:0051302 113 0.039
methylation GO:0032259 101 0.039
rna modification GO:0009451 99 0.039
cell cycle g1 s phase transition GO:0044843 64 0.039
meiotic nuclear division GO:0007126 163 0.038
negative regulation of cellular protein metabolic process GO:0032269 85 0.038
Mouse
mitotic cell cycle checkpoint GO:0007093 56 0.038
positive regulation of nucleic acid templated transcription GO:1903508 286 0.037
negative regulation of translation GO:0017148 18 0.037
Mouse
dna repair GO:0006281 236 0.036
negative regulation of gene expression epigenetic GO:0045814 147 0.036
vesicle mediated transport GO:0016192 335 0.036
organonitrogen compound biosynthetic process GO:1901566 314 0.036
trna processing GO:0008033 101 0.035
multi organism process GO:0051704 233 0.034
Mouse
regulation of catabolic process GO:0009894 199 0.034
mitotic cell cycle GO:0000278 306 0.034
positive regulation of translation GO:0045727 34 0.033
mrna polyadenylation GO:0006378 20 0.032
reproductive process GO:0022414 248 0.032
Mouse
carboxylic acid biosynthetic process GO:0046394 152 0.032
protein complex disassembly GO:0043241 70 0.031
negative regulation of rna biosynthetic process GO:1902679 260 0.031
rna export from nucleus GO:0006405 88 0.031
g1 s transition of mitotic cell cycle GO:0000082 64 0.031
anatomical structure homeostasis GO:0060249 74 0.029
cellular respiration GO:0045333 82 0.029
regulation of cell communication GO:0010646 124 0.029
response to osmotic stress GO:0006970 83 0.029
carbohydrate derivative metabolic process GO:1901135 549 0.028
macromolecule methylation GO:0043414 85 0.028
anatomical structure development GO:0048856 160 0.027
Mouse Worm
dna dependent dna replication GO:0006261 115 0.027
protein complex biogenesis GO:0070271 314 0.027
gene silencing by rna GO:0031047 3 0.027
snrna processing GO:0016180 17 0.027
positive regulation of nuclear transcribed mrna catabolic process deadenylation dependent decay GO:1900153 5 0.026
organelle assembly GO:0070925 118 0.025
dna replication GO:0006260 147 0.025
negative regulation of translational initiation GO:0045947 4 0.024
replicative cell aging GO:0001302 46 0.024
phosphatidylinositol metabolic process GO:0046488 62 0.024
mitotic nuclear division GO:0007067 131 0.024
cellular response to nutrient GO:0031670 50 0.024
anatomical structure morphogenesis GO:0009653 160 0.023
Worm
reproductive process in single celled organism GO:0022413 145 0.023
nucleoside metabolic process GO:0009116 394 0.022
regulation of gene silencing GO:0060968 41 0.022
cellular modified amino acid metabolic process GO:0006575 51 0.021
cellular developmental process GO:0048869 191 0.021
Mouse
chromatin modification GO:0016568 200 0.021
regulation of cell cycle process GO:0010564 150 0.021
cellular response to nutrient levels GO:0031669 144 0.020
translational elongation GO:0006414 32 0.020
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.020
histone methylation GO:0016571 28 0.020
regulation of response to stimulus GO:0048583 157 0.020
meiotic cell cycle process GO:1903046 229 0.020
nuclear transcribed mrna catabolic process nonsense mediated decay GO:0000184 15 0.020
response to organic cyclic compound GO:0014070 1 0.019
lipid metabolic process GO:0006629 269 0.019
positive regulation of cell death GO:0010942 3 0.019
cell aging GO:0007569 70 0.019
mating type determination GO:0007531 32 0.019
regulation of phosphate metabolic process GO:0019220 230 0.019
cofactor biosynthetic process GO:0051188 80 0.018
nuclear mrna surveillance GO:0071028 22 0.018
snrna metabolic process GO:0016073 25 0.018
ribonucleoprotein complex export from nucleus GO:0071426 46 0.018
regulation of mrna metabolic process GO:1903311 17 0.017
Human Yeast Fly
cellular response to oxidative stress GO:0034599 94 0.017
response to chemical GO:0042221 390 0.017
positive regulation of cellular protein metabolic process GO:0032270 89 0.016
cellular response to extracellular stimulus GO:0031668 150 0.016
regulation of cellular ketone metabolic process GO:0010565 42 0.016
regulation of cellular localization GO:0060341 50 0.016
ribonucleoside triphosphate metabolic process GO:0009199 356 0.016
purine ribonucleotide metabolic process GO:0009150 372 0.016
glycerophospholipid metabolic process GO:0006650 98 0.016
protein processing GO:0016485 64 0.015
positive regulation of cell cycle process GO:0090068 31 0.015
regulation of proteolysis GO:0030162 44 0.015
negative regulation of intracellular signal transduction GO:1902532 27 0.015
negative regulation of mitotic cell cycle GO:0045930 63 0.015
regulation of mrna splicing via spliceosome GO:0048024 3 0.014
Human Yeast Fly
snorna 3 end processing GO:0031126 21 0.014
negative regulation of cellular component organization GO:0051129 109 0.014
establishment of protein localization to membrane GO:0090150 99 0.014
chromatin silencing at telomere GO:0006348 84 0.014
dna recombination GO:0006310 172 0.014
macromolecular complex disassembly GO:0032984 80 0.014
secretion GO:0046903 50 0.014
sporulation resulting in formation of a cellular spore GO:0030435 129 0.014
cell cycle phase transition GO:0044770 144 0.014
purine ribonucleoside catabolic process GO:0046130 330 0.014
intracellular mrna localization GO:0008298 23 0.013
sphingolipid metabolic process GO:0006665 41 0.013
regulation of catalytic activity GO:0050790 307 0.013
cellular protein complex disassembly GO:0043624 42 0.013
cation transport GO:0006812 166 0.013
telomere maintenance GO:0000723 74 0.013
protein localization to organelle GO:0033365 337 0.012
cellular amino acid metabolic process GO:0006520 225 0.012
regulation of intracellular signal transduction GO:1902531 78 0.012
positive regulation of apoptotic process GO:0043065 3 0.012
positive regulation of programmed cell death GO:0043068 3 0.012
phosphorylation GO:0016310 291 0.012
positive regulation of catalytic activity GO:0043085 178 0.012
reproduction of a single celled organism GO:0032505 191 0.011
negative regulation of cellular catabolic process GO:0031330 43 0.011
tor signaling GO:0031929 17 0.011
purine containing compound metabolic process GO:0072521 400 0.011
proton transport GO:0015992 61 0.011
programmed cell death GO:0012501 30 0.011
endomembrane system organization GO:0010256 74 0.011
cation homeostasis GO:0055080 105 0.011
cellular ketone metabolic process GO:0042180 63 0.011
cellular response to external stimulus GO:0071496 150 0.011
cell differentiation GO:0030154 161 0.011
Mouse
maintenance of location GO:0051235 66 0.011
purine nucleoside metabolic process GO:0042278 380 0.011
chromatin remodeling GO:0006338 80 0.011
oxidation reduction process GO:0055114 353 0.010
single organism membrane organization GO:0044802 275 0.010
cellular lipid metabolic process GO:0044255 229 0.010
ribonucleoside metabolic process GO:0009119 389 0.010

PUB1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.020