Saccharomyces cerevisiae

83 known processes

IOC3 (YFR013W)

Ioc3p

IOC3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
chromatin remodeling GO:0006338 80 0.490
chromatin organization GO:0006325 242 0.330
regulation of cellular component biogenesis GO:0044087 112 0.235
purine nucleoside triphosphate metabolic process GO:0009144 356 0.213
nucleoside catabolic process GO:0009164 335 0.208
purine ribonucleoside metabolic process GO:0046128 380 0.194
regulation of protein complex assembly GO:0043254 77 0.189
ribonucleoside metabolic process GO:0009119 389 0.174
aromatic compound catabolic process GO:0019439 491 0.163
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.150
nucleobase containing small molecule metabolic process GO:0055086 491 0.142
purine ribonucleotide metabolic process GO:0009150 372 0.138
organic cyclic compound catabolic process GO:1901361 499 0.136
nucleoside phosphate metabolic process GO:0006753 458 0.135
organophosphate metabolic process GO:0019637 597 0.132
ribonucleotide metabolic process GO:0009259 377 0.128
nucleotide metabolic process GO:0009117 453 0.126
purine nucleoside catabolic process GO:0006152 330 0.121
nucleoside triphosphate metabolic process GO:0009141 364 0.115
nucleobase containing compound catabolic process GO:0034655 479 0.115
positive regulation of rna biosynthetic process GO:1902680 286 0.115
purine nucleoside metabolic process GO:0042278 380 0.112
glycosyl compound catabolic process GO:1901658 335 0.109
purine nucleotide catabolic process GO:0006195 328 0.106
nucleotide catabolic process GO:0009166 330 0.103
organonitrogen compound catabolic process GO:1901565 404 0.100
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.099
organophosphate catabolic process GO:0046434 338 0.098
cellular nitrogen compound catabolic process GO:0044270 494 0.095
guanosine containing compound catabolic process GO:1901069 109 0.090
purine containing compound metabolic process GO:0072521 400 0.089
carbohydrate derivative catabolic process GO:1901136 339 0.088
positive regulation of rna metabolic process GO:0051254 294 0.088
ribonucleoprotein complex subunit organization GO:0071826 152 0.088
protein dna complex subunit organization GO:0071824 153 0.085
carbohydrate derivative metabolic process GO:1901135 549 0.085
purine ribonucleoside catabolic process GO:0046130 330 0.081
ribonucleoside triphosphate metabolic process GO:0009199 356 0.079
guanosine containing compound metabolic process GO:1901068 111 0.078
purine nucleoside triphosphate catabolic process GO:0009146 329 0.078
purine nucleotide metabolic process GO:0006163 376 0.078
gtp metabolic process GO:0046039 107 0.074
actin filament based process GO:0030029 104 0.073
positive regulation of macromolecule metabolic process GO:0010604 394 0.072
ribonucleoside triphosphate catabolic process GO:0009203 327 0.070
nucleoside metabolic process GO:0009116 394 0.070
positive regulation of nucleic acid templated transcription GO:1903508 286 0.067
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.065
signal transduction GO:0007165 208 0.062
protein complex biogenesis GO:0070271 314 0.062
ribonucleotide catabolic process GO:0009261 327 0.062
transcription from rna polymerase i promoter GO:0006360 63 0.061
purine containing compound catabolic process GO:0072523 332 0.061
ribonucleoside catabolic process GO:0042454 332 0.061
single organism catabolic process GO:0044712 619 0.061
nucleoside phosphate catabolic process GO:1901292 331 0.061
nucleoside triphosphate catabolic process GO:0009143 329 0.059
regulation of biological quality GO:0065008 391 0.059
positive regulation of cellular biosynthetic process GO:0031328 336 0.056
negative regulation of cellular metabolic process GO:0031324 407 0.055
single organism cellular localization GO:1902580 375 0.054
dna templated transcription initiation GO:0006352 71 0.053
cell communication GO:0007154 345 0.052
negative regulation of cellular biosynthetic process GO:0031327 312 0.052
dna templated transcription elongation GO:0006354 91 0.051
heterocycle catabolic process GO:0046700 494 0.051
ribonucleoprotein complex assembly GO:0022618 143 0.051
glycosyl compound metabolic process GO:1901657 398 0.050
regulation of catalytic activity GO:0050790 307 0.050
negative regulation of rna metabolic process GO:0051253 262 0.049
ribose phosphate metabolic process GO:0019693 384 0.049
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.048
response to chemical GO:0042221 390 0.047
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.047
protein dna complex assembly GO:0065004 105 0.046
single organism reproductive process GO:0044702 159 0.045
regulation of dna templated transcription initiation GO:2000142 19 0.045
establishment of protein localization GO:0045184 367 0.045
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.045
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.044
purine ribonucleotide catabolic process GO:0009154 327 0.041
cellular amino acid metabolic process GO:0006520 225 0.041
positive regulation of biosynthetic process GO:0009891 336 0.040
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.039
protein complex assembly GO:0006461 302 0.037
single organism membrane organization GO:0044802 275 0.036
organic acid metabolic process GO:0006082 352 0.036
organelle assembly GO:0070925 118 0.036
protein localization to endoplasmic reticulum GO:0070972 47 0.036
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.035
protein processing GO:0016485 64 0.033
nucleosome organization GO:0034728 63 0.033
negative regulation of biosynthetic process GO:0009890 312 0.033
regulation of cellular component organization GO:0051128 334 0.032
negative regulation of macromolecule metabolic process GO:0010605 375 0.032
regulation of response to stimulus GO:0048583 157 0.031
regulation of protein metabolic process GO:0051246 237 0.031
negative regulation of transcription dna templated GO:0045892 258 0.031
protein localization to membrane GO:0072657 102 0.031
cellular response to organic substance GO:0071310 159 0.030
signaling GO:0023052 208 0.030
chromatin modification GO:0016568 200 0.029
protein localization to organelle GO:0033365 337 0.029
reproduction of a single celled organism GO:0032505 191 0.029
chromatin assembly GO:0031497 35 0.029
cellular amino acid biosynthetic process GO:0008652 118 0.028
positive regulation of gene expression GO:0010628 321 0.028
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.028
actin cytoskeleton organization GO:0030036 100 0.028
regulation of molecular function GO:0065009 320 0.028
response to organic cyclic compound GO:0014070 1 0.027
establishment of protein localization to membrane GO:0090150 99 0.025
nucleus organization GO:0006997 62 0.024
positive regulation of gtpase activity GO:0043547 80 0.024
cellular response to chemical stimulus GO:0070887 315 0.024
homeostatic process GO:0042592 227 0.024
transmembrane transport GO:0055085 349 0.024
positive regulation of transcription dna templated GO:0045893 286 0.023
response to organic substance GO:0010033 182 0.023
histone exchange GO:0043486 18 0.023
response to abiotic stimulus GO:0009628 159 0.023
cellular chemical homeostasis GO:0055082 123 0.023
establishment of protein localization to organelle GO:0072594 278 0.023
regulation of cell communication GO:0010646 124 0.022
maintenance of location in cell GO:0051651 58 0.022
maintenance of protein location GO:0045185 53 0.022
maintenance of location GO:0051235 66 0.022
negative regulation of rna biosynthetic process GO:1902679 260 0.022
oxoacid metabolic process GO:0043436 351 0.022
dna templated transcriptional start site selection GO:0001173 7 0.021
regulation of intracellular signal transduction GO:1902531 78 0.021
regulation of nucleotide catabolic process GO:0030811 106 0.021
double strand break repair GO:0006302 105 0.021
response to pheromone GO:0019236 92 0.021
small molecule catabolic process GO:0044282 88 0.021
termination of rna polymerase ii transcription GO:0006369 26 0.021
regulation of dna replication GO:0006275 51 0.021
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.020
ion homeostasis GO:0050801 118 0.020
positive regulation of catalytic activity GO:0043085 178 0.020
meiotic cell cycle GO:0051321 272 0.020
single organism developmental process GO:0044767 258 0.020
endomembrane system organization GO:0010256 74 0.020
dna dependent dna replication GO:0006261 115 0.020
protein targeting GO:0006605 272 0.020
gtp catabolic process GO:0006184 107 0.019
cellular metal ion homeostasis GO:0006875 78 0.019
cellular amine metabolic process GO:0044106 51 0.019
chemical homeostasis GO:0048878 137 0.019
regulation of histone exchange GO:1900049 4 0.019
positive regulation of cellular component organization GO:0051130 116 0.019
regulation of purine nucleotide metabolic process GO:1900542 109 0.019
regulation of cellular protein metabolic process GO:0032268 232 0.019
chromatin assembly or disassembly GO:0006333 60 0.019
reproductive process in single celled organism GO:0022413 145 0.018
cellular response to abiotic stimulus GO:0071214 62 0.018
cell cycle dna replication GO:0044786 36 0.018
protein alkylation GO:0008213 48 0.018
negative regulation of cellular protein metabolic process GO:0032269 85 0.018
negative regulation of gene expression GO:0010629 312 0.018
regulation of gtp catabolic process GO:0033124 84 0.018
nucleosome mobilization GO:0042766 11 0.017
intracellular signal transduction GO:0035556 112 0.017
regulation of transcription initiation from rna polymerase ii promoter GO:0060260 19 0.017
amine metabolic process GO:0009308 51 0.017
protein methylation GO:0006479 48 0.017
er to golgi vesicle mediated transport GO:0006888 86 0.017
protein transport GO:0015031 345 0.017
cellular carbohydrate metabolic process GO:0044262 135 0.017
regulation of gtpase activity GO:0043087 84 0.017
response to uv GO:0009411 4 0.017
regulation of protein phosphorylation GO:0001932 75 0.017
single organism signaling GO:0044700 208 0.017
regulation of dna dependent dna replication GO:0090329 37 0.017
carboxylic acid metabolic process GO:0019752 338 0.016
regulation of signaling GO:0023051 119 0.016
transcriptional start site selection at rna polymerase ii promoter GO:0001174 7 0.016
maintenance of protein location in cell GO:0032507 50 0.016
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.016
transcription initiation from rna polymerase ii promoter GO:0006367 55 0.016
positive regulation of purine nucleotide metabolic process GO:1900544 100 0.016
regulation of signal transduction GO:0009966 114 0.016
positive regulation of hydrolase activity GO:0051345 112 0.015
atp catabolic process GO:0006200 224 0.015
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.015
peptidyl amino acid modification GO:0018193 116 0.015
regulation of nucleotide metabolic process GO:0006140 110 0.015
regulation of transcription by pheromones GO:0009373 14 0.015
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.015
purine nucleoside monophosphate metabolic process GO:0009126 262 0.014
dna conformation change GO:0071103 98 0.014
regulation of transcription from rna polymerase ii promoter by pheromones GO:0046019 14 0.014
regulation of dna templated transcription elongation GO:0032784 44 0.014
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.014
regulation of localization GO:0032879 127 0.014
negative regulation of dna metabolic process GO:0051053 36 0.014
regulation of nucleoside metabolic process GO:0009118 106 0.014
cellular response to oxygen containing compound GO:1901701 43 0.014
organic acid biosynthetic process GO:0016053 152 0.013
ribonucleoside monophosphate catabolic process GO:0009158 224 0.013
macromolecule methylation GO:0043414 85 0.013
cellular macromolecule catabolic process GO:0044265 363 0.013
positive regulation of nucleotide catabolic process GO:0030813 97 0.013
alpha amino acid metabolic process GO:1901605 124 0.013
regulation of purine nucleotide catabolic process GO:0033121 106 0.013
methylation GO:0032259 101 0.013
cell fate commitment GO:0045165 32 0.013
reproductive process GO:0022414 248 0.013
negative regulation of cellular component organization GO:0051129 109 0.013
regulation of phosphate metabolic process GO:0019220 230 0.013
golgi vesicle transport GO:0048193 188 0.013
regulation of cellular amino acid metabolic process GO:0006521 16 0.012
sporulation resulting in formation of a cellular spore GO:0030435 129 0.012
ascospore formation GO:0030437 107 0.012
dna packaging GO:0006323 55 0.012
regulation of phosphorus metabolic process GO:0051174 230 0.012
protein maturation GO:0051604 76 0.012
cellular response to extracellular stimulus GO:0031668 150 0.012
regulation of cellular catabolic process GO:0031329 195 0.012
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 40 0.012
organelle fusion GO:0048284 85 0.012
protein targeting to vacuole GO:0006623 91 0.012
positive regulation of nucleoside metabolic process GO:0045979 97 0.012
cellular response to pheromone GO:0071444 88 0.012
small molecule biosynthetic process GO:0044283 258 0.011
negative regulation of protein metabolic process GO:0051248 85 0.011
vesicle mediated transport GO:0016192 335 0.011
small gtpase mediated signal transduction GO:0007264 36 0.011
regulation of catabolic process GO:0009894 199 0.011
developmental process involved in reproduction GO:0003006 159 0.011
dna templated transcription termination GO:0006353 42 0.011
cellular developmental process GO:0048869 191 0.011
positive regulation of ras gtpase activity GO:0032320 41 0.011
mitotic cell cycle GO:0000278 306 0.011
macromolecular complex disassembly GO:0032984 80 0.011
response to oxygen containing compound GO:1901700 61 0.011
cytoskeleton organization GO:0007010 230 0.011
cell wall organization or biogenesis GO:0071554 190 0.011
ncrna processing GO:0034470 330 0.011
gene silencing GO:0016458 151 0.011
response to endogenous stimulus GO:0009719 26 0.011
negative regulation of protein maturation GO:1903318 33 0.011
ion transport GO:0006811 274 0.011
protein phosphorylation GO:0006468 197 0.011
membrane organization GO:0061024 276 0.010
nucleosome assembly GO:0006334 16 0.010
dna replication GO:0006260 147 0.010
multi organism reproductive process GO:0044703 216 0.010
positive regulation of protein modification process GO:0031401 49 0.010
transcription elongation from rna polymerase ii promoter GO:0006368 81 0.010
regulation of ras protein signal transduction GO:0046578 47 0.010
cell differentiation GO:0030154 161 0.010
regulation of dna metabolic process GO:0051052 100 0.010
regulation of cellular ketone metabolic process GO:0010565 42 0.010
glycosylation GO:0070085 66 0.010
organelle localization GO:0051640 128 0.010
carbohydrate metabolic process GO:0005975 252 0.010

IOC3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.018
nervous system disease DOID:863 0 0.010