|
positive regulation of rna biosynthetic process
|
GO:1902680 |
286 |
0.633
|
|
|
positive regulation of cellular biosynthetic process
|
GO:0031328 |
336 |
0.614
|
|
|
positive regulation of transcription dna templated
|
GO:0045893 |
286 |
0.612
|
|
|
positive regulation of nucleic acid templated transcription
|
GO:1903508 |
286 |
0.605
|
|
|
positive regulation of nucleobase containing compound metabolic process
|
GO:0045935 |
409 |
0.599
|
|
|
positive regulation of gene expression
|
GO:0010628 |
321 |
0.575
|
|
|
positive regulation of nitrogen compound metabolic process
|
GO:0051173 |
412 |
0.533
|
|
|
positive regulation of transcription from rna polymerase ii promoter
|
GO:0045944 |
252 |
0.531
|
|
|
organic cyclic compound catabolic process
|
GO:1901361 |
499 |
0.451
|
|
|
cell communication
|
GO:0007154 |
345 |
0.445
|
|
|
signaling
|
GO:0023052 |
208 |
0.418
|
|
|
positive regulation of macromolecule metabolic process
|
GO:0010604 |
394 |
0.404
|
|
|
signal transduction
|
GO:0007165 |
208 |
0.399
|
|
|
positive regulation of macromolecule biosynthetic process
|
GO:0010557 |
325 |
0.385
|
|
|
intracellular signal transduction
|
GO:0035556 |
112 |
0.347
|
|
|
heterocycle catabolic process
|
GO:0046700 |
494 |
0.323
|
|
|
cellular nitrogen compound catabolic process
|
GO:0044270 |
494 |
0.317
|
|
|
regulation of transcription from rna polymerase ii promoter
|
GO:0006357 |
394 |
0.277
|
|
|
dna replication
|
GO:0006260 |
147 |
0.266
|
|
|
negative regulation of rna biosynthetic process
|
GO:1902679 |
260 |
0.256
|
|
|
developmental process
|
GO:0032502 |
261 |
0.250
|
|
|
positive regulation of rna metabolic process
|
GO:0051254 |
294 |
0.238
|
|
|
mitotic cell cycle phase transition
|
GO:0044772 |
141 |
0.233
|
|
|
single organism catabolic process
|
GO:0044712 |
619 |
0.226
|
|
|
nucleobase containing compound catabolic process
|
GO:0034655 |
479 |
0.218
|
|
|
single organism signaling
|
GO:0044700 |
208 |
0.212
|
|
|
positive regulation of biosynthetic process
|
GO:0009891 |
336 |
0.187
|
|
|
mitotic cell cycle
|
GO:0000278 |
306 |
0.170
|
|
|
organonitrogen compound biosynthetic process
|
GO:1901566 |
314 |
0.164
|
|
|
regulation of biological quality
|
GO:0065008 |
391 |
0.161
|
|
|
macromolecule catabolic process
|
GO:0009057 |
383 |
0.158
|
|
|
purine nucleoside metabolic process
|
GO:0042278 |
380 |
0.153
|
|
|
glycosyl compound metabolic process
|
GO:1901657 |
398 |
0.150
|
|
|
fungal type cell wall organization or biogenesis
|
GO:0071852 |
169 |
0.148
|
|
|
dna dependent dna replication
|
GO:0006261 |
115 |
0.144
|
|
|
cell wall organization or biogenesis
|
GO:0071554 |
190 |
0.134
|
|
|
organophosphate metabolic process
|
GO:0019637 |
597 |
0.131
|
|
|
negative regulation of nitrogen compound metabolic process
|
GO:0051172 |
300 |
0.124
|
|
|
protein complex biogenesis
|
GO:0070271 |
314 |
0.122
|
Yeast |
|
dna repair
|
GO:0006281 |
236 |
0.121
|
|
|
dna recombination
|
GO:0006310 |
172 |
0.119
|
|
|
nucleobase containing small molecule metabolic process
|
GO:0055086 |
491 |
0.114
|
|
|
single organism developmental process
|
GO:0044767 |
258 |
0.106
|
|
|
response to abiotic stimulus
|
GO:0009628 |
159 |
0.106
|
Yeast |
|
response to oxidative stress
|
GO:0006979 |
99 |
0.099
|
|
|
aging
|
GO:0007568 |
71 |
0.098
|
|
|
cellular response to chemical stimulus
|
GO:0070887 |
315 |
0.097
|
|
|
cell wall organization
|
GO:0071555 |
146 |
0.094
|
|
|
cell cycle phase transition
|
GO:0044770 |
144 |
0.092
|
|
|
carbohydrate derivative metabolic process
|
GO:1901135 |
549 |
0.089
|
|
|
fungal type cell wall organization
|
GO:0031505 |
145 |
0.086
|
|
|
negative regulation of cellular biosynthetic process
|
GO:0031327 |
312 |
0.085
|
|
|
aromatic compound catabolic process
|
GO:0019439 |
491 |
0.083
|
|
|
peptidyl amino acid modification
|
GO:0018193 |
116 |
0.082
|
|
|
regulation of signal transduction
|
GO:0009966 |
114 |
0.082
|
Yeast |
|
lipid biosynthetic process
|
GO:0008610 |
170 |
0.081
|
|
|
purine ribonucleoside metabolic process
|
GO:0046128 |
380 |
0.081
|
|
|
mitotic cell cycle process
|
GO:1903047 |
294 |
0.080
|
|
|
negative regulation of nucleic acid templated transcription
|
GO:1903507 |
260 |
0.079
|
|
|
negative regulation of cellular macromolecule biosynthetic process
|
GO:2000113 |
289 |
0.078
|
|
|
purine nucleoside triphosphate metabolic process
|
GO:0009144 |
356 |
0.073
|
|
|
negative regulation of biosynthetic process
|
GO:0009890 |
312 |
0.069
|
|
|
nucleic acid phosphodiester bond hydrolysis
|
GO:0090305 |
194 |
0.068
|
|
|
cellular metal ion homeostasis
|
GO:0006875 |
78 |
0.067
|
|
|
protein complex assembly
|
GO:0006461 |
302 |
0.064
|
Yeast |
|
regulation of cell communication
|
GO:0010646 |
124 |
0.064
|
Yeast |
|
purine containing compound catabolic process
|
GO:0072523 |
332 |
0.063
|
|
|
negative regulation of macromolecule biosynthetic process
|
GO:0010558 |
291 |
0.062
|
|
|
anatomical structure development
|
GO:0048856 |
160 |
0.062
|
|
|
purine ribonucleoside triphosphate metabolic process
|
GO:0009205 |
354 |
0.062
|
|
|
nucleoside metabolic process
|
GO:0009116 |
394 |
0.061
|
|
|
negative regulation of transcription dna templated
|
GO:0045892 |
258 |
0.059
|
|
|
regulation of cell cycle process
|
GO:0010564 |
150 |
0.059
|
|
|
regulation of anatomical structure size
|
GO:0090066 |
50 |
0.058
|
|
|
regulation of signaling
|
GO:0023051 |
119 |
0.057
|
Yeast |
|
organophosphate biosynthetic process
|
GO:0090407 |
182 |
0.056
|
|
|
response to chemical
|
GO:0042221 |
390 |
0.055
|
|
|
negative regulation of cell communication
|
GO:0010648 |
33 |
0.053
|
Yeast |
|
cellular response to osmotic stress
|
GO:0071470 |
50 |
0.053
|
|
|
nucleoside phosphate catabolic process
|
GO:1901292 |
331 |
0.052
|
|
|
anatomical structure homeostasis
|
GO:0060249 |
74 |
0.052
|
|
|
filamentous growth
|
GO:0030447 |
124 |
0.051
|
|
|
purine containing compound metabolic process
|
GO:0072521 |
400 |
0.050
|
|
|
regulation of intracellular signal transduction
|
GO:1902531 |
78 |
0.050
|
Yeast |
|
lipid metabolic process
|
GO:0006629 |
269 |
0.050
|
|
|
small molecule biosynthetic process
|
GO:0044283 |
258 |
0.050
|
|
|
nucleoside catabolic process
|
GO:0009164 |
335 |
0.049
|
|
|
regulation of cellular component size
|
GO:0032535 |
50 |
0.049
|
|
|
regulation of cellular component organization
|
GO:0051128 |
334 |
0.049
|
|
|
nitrogen compound transport
|
GO:0071705 |
212 |
0.049
|
|
|
negative regulation of cellular metabolic process
|
GO:0031324 |
407 |
0.048
|
|
|
cellular developmental process
|
GO:0048869 |
191 |
0.047
|
|
|
growth
|
GO:0040007 |
157 |
0.047
|
|
|
anatomical structure morphogenesis
|
GO:0009653 |
160 |
0.047
|
|
|
response to organic substance
|
GO:0010033 |
182 |
0.047
|
|
|
cell cycle g1 s phase transition
|
GO:0044843 |
64 |
0.047
|
|
|
purine nucleotide metabolic process
|
GO:0006163 |
376 |
0.047
|
|
|
phospholipid metabolic process
|
GO:0006644 |
125 |
0.047
|
|
|
ribonucleotide metabolic process
|
GO:0009259 |
377 |
0.046
|
|
|
negative regulation of gene expression
|
GO:0010629 |
312 |
0.045
|
|
|
response to osmotic stress
|
GO:0006970 |
83 |
0.045
|
|
|
regulation of response to stress
|
GO:0080134 |
57 |
0.045
|
|
|
negative regulation of rna metabolic process
|
GO:0051253 |
262 |
0.045
|
|
|
regulation of transcription from rna polymerase ii promoter in response to stress
|
GO:0043618 |
51 |
0.045
|
|
|
nuclear transport
|
GO:0051169 |
165 |
0.044
|
|
|
pseudohyphal growth
|
GO:0007124 |
75 |
0.042
|
|
|
cation homeostasis
|
GO:0055080 |
105 |
0.041
|
|
|
regulation of cell size
|
GO:0008361 |
30 |
0.041
|
|
|
g1 s transition of mitotic cell cycle
|
GO:0000082 |
64 |
0.041
|
|
|
cellular response to abiotic stimulus
|
GO:0071214 |
62 |
0.039
|
|
|
purine ribonucleotide metabolic process
|
GO:0009150 |
372 |
0.039
|
|
|
protein localization to nucleus
|
GO:0034504 |
74 |
0.039
|
|
|
cellular transition metal ion homeostasis
|
GO:0046916 |
59 |
0.038
|
|
|
regulation of cell cycle
|
GO:0051726 |
195 |
0.037
|
|
|
regulation of localization
|
GO:0032879 |
127 |
0.037
|
|
|
cell aging
|
GO:0007569 |
70 |
0.036
|
|
|
nucleotide metabolic process
|
GO:0009117 |
453 |
0.035
|
|
|
cellular amino acid metabolic process
|
GO:0006520 |
225 |
0.035
|
|
|
positive regulation of organelle organization
|
GO:0010638 |
85 |
0.035
|
|
|
regulation of catabolic process
|
GO:0009894 |
199 |
0.035
|
|
|
cellular lipid metabolic process
|
GO:0044255 |
229 |
0.035
|
|
|
ribonucleoside triphosphate metabolic process
|
GO:0009199 |
356 |
0.035
|
|
|
regulation of phosphorus metabolic process
|
GO:0051174 |
230 |
0.034
|
|
|
organonitrogen compound catabolic process
|
GO:1901565 |
404 |
0.033
|
|
|
response to nutrient levels
|
GO:0031667 |
150 |
0.033
|
|
|
external encapsulating structure organization
|
GO:0045229 |
146 |
0.032
|
|
|
ribonucleoside metabolic process
|
GO:0009119 |
389 |
0.032
|
|
|
regulation of mitotic cell cycle
|
GO:0007346 |
107 |
0.032
|
|
|
negative regulation of nucleobase containing compound metabolic process
|
GO:0045934 |
295 |
0.031
|
|
|
ribonucleoprotein complex assembly
|
GO:0022618 |
143 |
0.031
|
|
|
cellular response to extracellular stimulus
|
GO:0031668 |
150 |
0.031
|
|
|
ribose phosphate metabolic process
|
GO:0019693 |
384 |
0.030
|
|
|
regulation of cellular component biogenesis
|
GO:0044087 |
112 |
0.029
|
|
|
protein autophosphorylation
|
GO:0046777 |
15 |
0.029
|
|
|
regulation of organelle organization
|
GO:0033043 |
243 |
0.029
|
|
|
response to external stimulus
|
GO:0009605 |
158 |
0.029
|
|
|
chromatin organization
|
GO:0006325 |
242 |
0.028
|
|
|
positive regulation of cellular component organization
|
GO:0051130 |
116 |
0.028
|
|
|
negative regulation of transcription from rna polymerase ii promoter
|
GO:0000122 |
137 |
0.028
|
|
|
oxoacid metabolic process
|
GO:0043436 |
351 |
0.028
|
|
|
cytokinesis
|
GO:0000910 |
92 |
0.028
|
|
|
purine ribonucleotide catabolic process
|
GO:0009154 |
327 |
0.027
|
|
|
carbohydrate derivative catabolic process
|
GO:1901136 |
339 |
0.027
|
|
|
purine nucleoside triphosphate catabolic process
|
GO:0009146 |
329 |
0.027
|
|
|
cell division
|
GO:0051301 |
205 |
0.027
|
|
|
nucleoside phosphate metabolic process
|
GO:0006753 |
458 |
0.026
|
|
|
cellular macromolecule catabolic process
|
GO:0044265 |
363 |
0.026
|
|
|
cellular homeostasis
|
GO:0019725 |
138 |
0.026
|
|
|
purine ribonucleoside triphosphate catabolic process
|
GO:0009207 |
327 |
0.026
|
|
|
positive regulation of cellular catabolic process
|
GO:0031331 |
128 |
0.026
|
|
|
filamentous growth of a population of unicellular organisms
|
GO:0044182 |
109 |
0.026
|
|
|
regulation of response to stimulus
|
GO:0048583 |
157 |
0.025
|
Yeast |
|
regulation of phosphate metabolic process
|
GO:0019220 |
230 |
0.025
|
|
|
response to organic cyclic compound
|
GO:0014070 |
1 |
0.025
|
|
|
nucleoside triphosphate metabolic process
|
GO:0009141 |
364 |
0.025
|
|
|
regulation of transport
|
GO:0051049 |
85 |
0.025
|
|
|
regulation of cellular catabolic process
|
GO:0031329 |
195 |
0.025
|
|
|
response to nutrient
|
GO:0007584 |
52 |
0.025
|
|
|
cell growth
|
GO:0016049 |
89 |
0.024
|
|
|
cellular ion homeostasis
|
GO:0006873 |
112 |
0.024
|
|
|
regulation of cytoskeleton organization
|
GO:0051493 |
63 |
0.024
|
|
|
alcohol biosynthetic process
|
GO:0046165 |
75 |
0.024
|
|
|
cellular response to organic substance
|
GO:0071310 |
159 |
0.024
|
|
|
replicative cell aging
|
GO:0001302 |
46 |
0.023
|
|
|
purine ribonucleoside catabolic process
|
GO:0046130 |
330 |
0.023
|
|
|
protein localization to organelle
|
GO:0033365 |
337 |
0.023
|
|
|
carboxylic acid metabolic process
|
GO:0019752 |
338 |
0.023
|
|
|
regulation of protein metabolic process
|
GO:0051246 |
237 |
0.023
|
|
|
regulation of gene expression epigenetic
|
GO:0040029 |
147 |
0.023
|
|
|
positive regulation of catabolic process
|
GO:0009896 |
135 |
0.022
|
|
|
phosphorylation
|
GO:0016310 |
291 |
0.022
|
|
|
positive regulation of catalytic activity
|
GO:0043085 |
178 |
0.022
|
|
|
cellular component disassembly
|
GO:0022411 |
86 |
0.022
|
|
|
negative regulation of signaling
|
GO:0023057 |
30 |
0.021
|
Yeast |
|
response to extracellular stimulus
|
GO:0009991 |
156 |
0.021
|
|
|
regulation of lipid metabolic process
|
GO:0019216 |
45 |
0.021
|
|
|
organophosphate catabolic process
|
GO:0046434 |
338 |
0.021
|
|
|
mitotic nuclear division
|
GO:0007067 |
131 |
0.021
|
|
|
protein targeting to nucleus
|
GO:0044744 |
57 |
0.021
|
|
|
regulation of dna metabolic process
|
GO:0051052 |
100 |
0.020
|
|
|
carbohydrate derivative biosynthetic process
|
GO:1901137 |
181 |
0.020
|
|
|
guanosine containing compound catabolic process
|
GO:1901069 |
109 |
0.020
|
|
|
regulation of sodium ion transport
|
GO:0002028 |
1 |
0.020
|
|
|
negative regulation of signal transduction
|
GO:0009968 |
30 |
0.020
|
Yeast |
|
cellular response to external stimulus
|
GO:0071496 |
150 |
0.020
|
|
|
hyperosmotic response
|
GO:0006972 |
19 |
0.020
|
|
|
rna catabolic process
|
GO:0006401 |
118 |
0.019
|
|
|
organic acid metabolic process
|
GO:0006082 |
352 |
0.019
|
|
|
positive regulation of molecular function
|
GO:0044093 |
185 |
0.019
|
|
|
gtp metabolic process
|
GO:0046039 |
107 |
0.019
|
|
|
invasive growth in response to glucose limitation
|
GO:0001403 |
61 |
0.019
|
|
|
ion transport
|
GO:0006811 |
274 |
0.018
|
|
|
translation
|
GO:0006412 |
230 |
0.018
|
|
|
ribonucleoside triphosphate catabolic process
|
GO:0009203 |
327 |
0.018
|
|
|
homeostatic process
|
GO:0042592 |
227 |
0.018
|
|
|
regulation of dna templated transcription in response to stress
|
GO:0043620 |
51 |
0.018
|
|
|
maintenance of location
|
GO:0051235 |
66 |
0.018
|
|
|
cellular cation homeostasis
|
GO:0030003 |
100 |
0.018
|
|
|
regulation of lipid biosynthetic process
|
GO:0046890 |
32 |
0.018
|
|
|
transition metal ion homeostasis
|
GO:0055076 |
59 |
0.017
|
|
|
sexual reproduction
|
GO:0019953 |
216 |
0.017
|
|
|
purine nucleotide catabolic process
|
GO:0006195 |
328 |
0.017
|
|
|
ribonucleotide catabolic process
|
GO:0009261 |
327 |
0.017
|
|
|
positive regulation of intracellular protein transport
|
GO:0090316 |
3 |
0.017
|
|
|
cell differentiation
|
GO:0030154 |
161 |
0.016
|
|
|
regulation of translation
|
GO:0006417 |
89 |
0.016
|
|
|
posttranscriptional regulation of gene expression
|
GO:0010608 |
115 |
0.016
|
|
|
cellular chemical homeostasis
|
GO:0055082 |
123 |
0.015
|
|
|
nuclear division
|
GO:0000280 |
263 |
0.015
|
|
|
amine metabolic process
|
GO:0009308 |
51 |
0.015
|
|
|
nucleotide catabolic process
|
GO:0009166 |
330 |
0.015
|
|
|
protein catabolic process
|
GO:0030163 |
221 |
0.015
|
|
|
mrna metabolic process
|
GO:0016071 |
269 |
0.015
|
|
|
response to oxygen containing compound
|
GO:1901700 |
61 |
0.015
|
|
|
response to organonitrogen compound
|
GO:0010243 |
18 |
0.015
|
|
|
chromosome segregation
|
GO:0007059 |
159 |
0.015
|
|
|
cellular component morphogenesis
|
GO:0032989 |
97 |
0.015
|
|
|
regulation of molecular function
|
GO:0065009 |
320 |
0.014
|
|
|
proteasome mediated ubiquitin dependent protein catabolic process
|
GO:0043161 |
137 |
0.014
|
|
|
autophagy
|
GO:0006914 |
106 |
0.014
|
|
|
regulation of cellular localization
|
GO:0060341 |
50 |
0.014
|
|
|
monocarboxylic acid metabolic process
|
GO:0032787 |
122 |
0.014
|
|
|
ribonucleoside monophosphate metabolic process
|
GO:0009161 |
265 |
0.013
|
|
|
ribonucleoprotein complex subunit organization
|
GO:0071826 |
152 |
0.013
|
|
|
monovalent inorganic cation transport
|
GO:0015672 |
78 |
0.013
|
|
|
protein dna complex subunit organization
|
GO:0071824 |
153 |
0.013
|
|
|
anatomical structure formation involved in morphogenesis
|
GO:0048646 |
136 |
0.013
|
|
|
glycosyl compound catabolic process
|
GO:1901658 |
335 |
0.013
|
|
|
organic hydroxy compound metabolic process
|
GO:1901615 |
125 |
0.013
|
|
|
nucleoside triphosphate catabolic process
|
GO:0009143 |
329 |
0.013
|
|
|
cytoskeleton dependent cytokinesis
|
GO:0061640 |
65 |
0.013
|
|
|
multi organism reproductive process
|
GO:0044703 |
216 |
0.013
|
|
|
osmosensory signaling pathway
|
GO:0007231 |
22 |
0.013
|
|
|
regulation of protein complex assembly
|
GO:0043254 |
77 |
0.013
|
|
|
response to hypoxia
|
GO:0001666 |
4 |
0.012
|
|
|
regulation of hydrolase activity
|
GO:0051336 |
133 |
0.012
|
|
|
ribonucleoside catabolic process
|
GO:0042454 |
332 |
0.012
|
|
|
negative regulation of macromolecule metabolic process
|
GO:0010605 |
375 |
0.012
|
|
|
actin filament based process
|
GO:0030029 |
104 |
0.012
|
|
|
cellular protein catabolic process
|
GO:0044257 |
213 |
0.012
|
|
|
positive regulation of phosphate metabolic process
|
GO:0045937 |
147 |
0.012
|
|
|
establishment of cell polarity
|
GO:0030010 |
64 |
0.012
|
|
|
cellular response to oxygen containing compound
|
GO:1901701 |
43 |
0.011
|
|
|
double strand break repair via homologous recombination
|
GO:0000724 |
54 |
0.011
|
|
|
gtp catabolic process
|
GO:0006184 |
107 |
0.011
|
|
|
chromatin silencing
|
GO:0006342 |
147 |
0.011
|
|
|
cellular response to oxidative stress
|
GO:0034599 |
94 |
0.011
|
|
|
monovalent inorganic cation homeostasis
|
GO:0055067 |
32 |
0.011
|
|
|
response to inorganic substance
|
GO:0010035 |
47 |
0.011
|
|
|
negative regulation of molecular function
|
GO:0044092 |
68 |
0.011
|
|
|
positive regulation of cell communication
|
GO:0010647 |
28 |
0.011
|
|
|
growth of unicellular organism as a thread of attached cells
|
GO:0070783 |
105 |
0.011
|
|
|
chromatin modification
|
GO:0016568 |
200 |
0.011
|
|
|
response to heat
|
GO:0009408 |
69 |
0.011
|
Yeast |
|
cofactor biosynthetic process
|
GO:0051188 |
80 |
0.011
|
|
|
regulation of cellular amine metabolic process
|
GO:0033238 |
21 |
0.011
|
|
|
nucleocytoplasmic transport
|
GO:0006913 |
163 |
0.011
|
|
|
purine nucleoside catabolic process
|
GO:0006152 |
330 |
0.011
|
|
|
ion homeostasis
|
GO:0050801 |
118 |
0.011
|
|
|
positive regulation of protein metabolic process
|
GO:0051247 |
93 |
0.011
|
|
|
protein import
|
GO:0017038 |
122 |
0.011
|
|
|
regulation of cell division
|
GO:0051302 |
113 |
0.010
|
|
|
regulation of dna dependent dna replication initiation
|
GO:0030174 |
21 |
0.010
|
|
|
mitotic cytokinetic process
|
GO:1902410 |
45 |
0.010
|
|
|
regulation of response to osmotic stress
|
GO:0047484 |
11 |
0.010
|
|