Saccharomyces cerevisiae

5 known processes

BER1 (YLR412W)

Ber1p

BER1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
trna modification GO:0006400 75 0.536
rna modification GO:0009451 99 0.221
trna processing GO:0008033 101 0.131
organophosphate metabolic process GO:0019637 597 0.112
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.075
lipid metabolic process GO:0006629 269 0.073
trna metabolic process GO:0006399 151 0.064
nucleobase containing compound catabolic process GO:0034655 479 0.062
ribosome biogenesis GO:0042254 335 0.061
negative regulation of nucleic acid templated transcription GO:1903507 260 0.059
cellular nitrogen compound catabolic process GO:0044270 494 0.054
negative regulation of gene expression GO:0010629 312 0.048
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.048
ncrna processing GO:0034470 330 0.048
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.047
cofactor metabolic process GO:0051186 126 0.043
negative regulation of macromolecule metabolic process GO:0010605 375 0.043
membrane organization GO:0061024 276 0.042
vesicle mediated transport GO:0016192 335 0.042
aromatic compound catabolic process GO:0019439 491 0.042
regulation of gene expression epigenetic GO:0040029 147 0.042
protein complex biogenesis GO:0070271 314 0.041
organic cyclic compound catabolic process GO:1901361 499 0.041
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.041
negative regulation of biosynthetic process GO:0009890 312 0.037
negative regulation of transcription dna templated GO:0045892 258 0.036
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.036
dna templated transcription termination GO:0006353 42 0.035
gene silencing GO:0016458 151 0.034
cofactor biosynthetic process GO:0051188 80 0.034
ribonucleoprotein complex assembly GO:0022618 143 0.033
negative regulation of rna biosynthetic process GO:1902679 260 0.033
negative regulation of cellular metabolic process GO:0031324 407 0.033
ribonucleoprotein complex subunit organization GO:0071826 152 0.033
organonitrogen compound catabolic process GO:1901565 404 0.032
negative regulation of cellular biosynthetic process GO:0031327 312 0.032
heterocycle catabolic process GO:0046700 494 0.032
phosphatidylinositol metabolic process GO:0046488 62 0.031
macromolecule catabolic process GO:0009057 383 0.030
negative regulation of rna metabolic process GO:0051253 262 0.029
glycerolipid metabolic process GO:0046486 108 0.028
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.028
vitamin metabolic process GO:0006766 41 0.028
coenzyme biosynthetic process GO:0009108 66 0.028
methylation GO:0032259 101 0.028
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.028
rrna metabolic process GO:0016072 244 0.027
cellular protein complex assembly GO:0043623 209 0.027
nucleoside phosphate metabolic process GO:0006753 458 0.026
organic anion transport GO:0015711 114 0.026
ribosome assembly GO:0042255 57 0.026
phospholipid metabolic process GO:0006644 125 0.026
positive regulation of gene expression GO:0010628 321 0.026
homeostatic process GO:0042592 227 0.025
cell differentiation GO:0030154 161 0.025
nucleoside phosphate catabolic process GO:1901292 331 0.025
macromolecule methylation GO:0043414 85 0.025
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.025
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.024
regulation of biological quality GO:0065008 391 0.023
organic hydroxy compound metabolic process GO:1901615 125 0.023
positive regulation of cellular component organization GO:0051130 116 0.023
mrna metabolic process GO:0016071 269 0.022
nucleobase containing small molecule metabolic process GO:0055086 491 0.022
protein localization to membrane GO:0072657 102 0.021
establishment of protein localization GO:0045184 367 0.021
single organism membrane organization GO:0044802 275 0.021
phospholipid biosynthetic process GO:0008654 89 0.021
organophosphate biosynthetic process GO:0090407 182 0.020
response to chemical GO:0042221 390 0.020
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.019
pyridine containing compound metabolic process GO:0072524 53 0.019
protein complex assembly GO:0006461 302 0.019
reproduction of a single celled organism GO:0032505 191 0.019
positive regulation of rna biosynthetic process GO:1902680 286 0.019
cellular amide metabolic process GO:0043603 59 0.019
purine nucleoside triphosphate catabolic process GO:0009146 329 0.018
nucleotide metabolic process GO:0009117 453 0.018
single organism catabolic process GO:0044712 619 0.017
transmembrane transport GO:0055085 349 0.017
dna repair GO:0006281 236 0.017
transcription from rna polymerase i promoter GO:0006360 63 0.017
protein transport GO:0015031 345 0.017
positive regulation of nucleic acid templated transcription GO:1903508 286 0.017
mrna catabolic process GO:0006402 93 0.017
regulation of cellular component biogenesis GO:0044087 112 0.016
carboxylic acid metabolic process GO:0019752 338 0.016
single organism developmental process GO:0044767 258 0.016
cellular lipid metabolic process GO:0044255 229 0.016
chemical homeostasis GO:0048878 137 0.016
cellular macromolecule catabolic process GO:0044265 363 0.016
nitrogen compound transport GO:0071705 212 0.016
purine nucleoside triphosphate metabolic process GO:0009144 356 0.016
regulation of cellular component organization GO:0051128 334 0.016
coenzyme metabolic process GO:0006732 104 0.016
ion transport GO:0006811 274 0.016
positive regulation of rna metabolic process GO:0051254 294 0.016
regulation of translation GO:0006417 89 0.016
glycerophospholipid metabolic process GO:0006650 98 0.015
organophosphate catabolic process GO:0046434 338 0.015
glycerophospholipid biosynthetic process GO:0046474 68 0.015
amine metabolic process GO:0009308 51 0.015
organonitrogen compound biosynthetic process GO:1901566 314 0.015
purine nucleotide catabolic process GO:0006195 328 0.015
termination of rna polymerase ii transcription GO:0006369 26 0.015
rrna transcription GO:0009303 31 0.015
organelle assembly GO:0070925 118 0.015
establishment of protein localization to membrane GO:0090150 99 0.015
nucleobase containing compound transport GO:0015931 124 0.015
protein maturation GO:0051604 76 0.015
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.015
chromatin silencing GO:0006342 147 0.015
cellular response to chemical stimulus GO:0070887 315 0.015
protein alkylation GO:0008213 48 0.014
cell communication GO:0007154 345 0.014
protein dna complex subunit organization GO:0071824 153 0.014
nucleoside triphosphate metabolic process GO:0009141 364 0.014
negative regulation of gene expression epigenetic GO:0045814 147 0.014
glycosyl compound metabolic process GO:1901657 398 0.013
growth GO:0040007 157 0.013
cellular amine metabolic process GO:0044106 51 0.013
cellular response to abiotic stimulus GO:0071214 62 0.013
trna methylation GO:0030488 21 0.013
reproductive process GO:0022414 248 0.013
small molecule biosynthetic process GO:0044283 258 0.013
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.013
protein localization to organelle GO:0033365 337 0.013
response to uv GO:0009411 4 0.013
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.013
pyridine containing compound biosynthetic process GO:0072525 24 0.013
ribose phosphate metabolic process GO:0019693 384 0.012
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.012
anatomical structure formation involved in morphogenesis GO:0048646 136 0.012
glycosyl compound catabolic process GO:1901658 335 0.012
oxidation reduction process GO:0055114 353 0.012
posttranscriptional regulation of gene expression GO:0010608 115 0.012
multi organism process GO:0051704 233 0.012
reproductive process in single celled organism GO:0022413 145 0.012
ribonucleoside metabolic process GO:0009119 389 0.012
rrna processing GO:0006364 227 0.011
oxoacid metabolic process GO:0043436 351 0.011
trna wobble base modification GO:0002097 27 0.011
nucleotide catabolic process GO:0009166 330 0.011
endocytosis GO:0006897 90 0.011
carbohydrate derivative catabolic process GO:1901136 339 0.011
cellular component disassembly GO:0022411 86 0.011
mrna processing GO:0006397 185 0.011
cellular ketone metabolic process GO:0042180 63 0.011
regulation of organelle organization GO:0033043 243 0.011
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 40 0.011
maturation of lsu rrna GO:0000470 39 0.011
positive regulation of transcription dna templated GO:0045893 286 0.011
purine ribonucleotide metabolic process GO:0009150 372 0.011
cation homeostasis GO:0055080 105 0.011
actin cytoskeleton organization GO:0030036 100 0.011
rna export from nucleus GO:0006405 88 0.011
positive regulation of secretion by cell GO:1903532 2 0.011
developmental process involved in reproduction GO:0003006 159 0.011
proton transporting two sector atpase complex assembly GO:0070071 15 0.010
response to extracellular stimulus GO:0009991 156 0.010
positive regulation of macromolecule metabolic process GO:0010604 394 0.010
maturation of 5 8s rrna GO:0000460 80 0.010
mrna export from nucleus GO:0006406 60 0.010
cell development GO:0048468 107 0.010
regulation of localization GO:0032879 127 0.010
cell wall biogenesis GO:0042546 93 0.010
purine nucleoside catabolic process GO:0006152 330 0.010
cellular developmental process GO:0048869 191 0.010
actin filament organization GO:0007015 56 0.010
atp catabolic process GO:0006200 224 0.010
sexual reproduction GO:0019953 216 0.010

BER1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.013