Saccharomyces cerevisiae

22 known processes

RPN13 (YLR421C)

Rpn13p

RPN13 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
modification dependent macromolecule catabolic process GO:0043632 203 0.770
proteasomal protein catabolic process GO:0010498 141 0.655
protein catabolic process GO:0030163 221 0.649
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.585
cellular response to dna damage stimulus GO:0006974 287 0.557
ubiquitin dependent protein catabolic process GO:0006511 181 0.546
modification dependent protein catabolic process GO:0019941 181 0.529
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.476
macromolecule catabolic process GO:0009057 383 0.454
cellular protein catabolic process GO:0044257 213 0.429
proteolysis GO:0006508 268 0.427
protein dna complex assembly GO:0065004 105 0.285
establishment of protein localization to organelle GO:0072594 278 0.266
cellular protein complex assembly GO:0043623 209 0.240
protein modification by small protein conjugation or removal GO:0070647 172 0.223
cellular macromolecule catabolic process GO:0044265 363 0.212
protein complex assembly GO:0006461 302 0.196
nuclear division GO:0000280 263 0.190
dna templated transcriptional preinitiation complex assembly GO:0070897 51 0.175
protein ubiquitination GO:0016567 118 0.145
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.143
regulation of biological quality GO:0065008 391 0.136
mitotic cell cycle process GO:1903047 294 0.133
regulation of cellular component organization GO:0051128 334 0.132
regulation of cell cycle GO:0051726 195 0.127
establishment of protein localization GO:0045184 367 0.126
proteasome assembly GO:0043248 31 0.114
single organism cellular localization GO:1902580 375 0.100
negative regulation of macromolecule metabolic process GO:0010605 375 0.094
proteasome regulatory particle assembly GO:0070682 11 0.093
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.092
protein targeting GO:0006605 272 0.090
negative regulation of biosynthetic process GO:0009890 312 0.087
nitrogen compound transport GO:0071705 212 0.086
protein modification by small protein conjugation GO:0032446 144 0.084
signaling GO:0023052 208 0.083
regulation of proteasomal ubiquitin dependent protein catabolic process GO:0032434 30 0.081
protein complex biogenesis GO:0070271 314 0.080
aromatic compound catabolic process GO:0019439 491 0.078
chromosome segregation GO:0007059 159 0.078
negative regulation of gene expression GO:0010629 312 0.077
protein localization to organelle GO:0033365 337 0.074
regulation of dna templated transcription elongation GO:0032784 44 0.073
negative regulation of cellular metabolic process GO:0031324 407 0.069
signal transduction GO:0007165 208 0.069
dna templated transcription initiation GO:0006352 71 0.069
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.064
mitotic nuclear division GO:0007067 131 0.062
negative regulation of transcription dna templated GO:0045892 258 0.061
protein transport GO:0015031 345 0.060
glycosyl compound catabolic process GO:1901658 335 0.060
ribonucleotide catabolic process GO:0009261 327 0.059
transcription initiation from rna polymerase ii promoter GO:0006367 55 0.058
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.053
positive regulation of nucleic acid templated transcription GO:1903508 286 0.052
organelle fission GO:0048285 272 0.051
dna templated transcription elongation GO:0006354 91 0.051
cell communication GO:0007154 345 0.051
er associated ubiquitin dependent protein catabolic process GO:0030433 46 0.050
positive regulation of transcription dna templated GO:0045893 286 0.049
regulation of nuclear division GO:0051783 103 0.049
glycosyl compound metabolic process GO:1901657 398 0.049
single organism signaling GO:0044700 208 0.048
nucleobase containing compound catabolic process GO:0034655 479 0.048
organophosphate catabolic process GO:0046434 338 0.046
maintenance of location GO:0051235 66 0.045
regulation of proteolysis GO:0030162 44 0.043
golgi vesicle transport GO:0048193 188 0.043
cellular nitrogen compound catabolic process GO:0044270 494 0.042
nuclear transport GO:0051169 165 0.041
regulation of protein metabolic process GO:0051246 237 0.040
regulation of cellular protein metabolic process GO:0032268 232 0.040
regulation of transport GO:0051049 85 0.040
purine nucleotide catabolic process GO:0006195 328 0.040
positive regulation of rna biosynthetic process GO:1902680 286 0.039
regulation of cell cycle process GO:0010564 150 0.039
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.038
regulation of signaling GO:0023051 119 0.038
regulation of molecular function GO:0065009 320 0.038
negative regulation of rna biosynthetic process GO:1902679 260 0.037
regulation of response to stimulus GO:0048583 157 0.037
protein dna complex subunit organization GO:0071824 153 0.036
phosphorylation GO:0016310 291 0.036
apoptotic process GO:0006915 30 0.036
mitotic cell cycle GO:0000278 306 0.036
rrna metabolic process GO:0016072 244 0.036
purine nucleoside triphosphate catabolic process GO:0009146 329 0.035
regulation of mapk cascade GO:0043408 22 0.034
regulation of transcription initiation from rna polymerase ii promoter GO:0060260 19 0.033
nucleobase containing small molecule metabolic process GO:0055086 491 0.033
regulation of transferase activity GO:0051338 83 0.033
positive regulation of protein metabolic process GO:0051247 93 0.032
organophosphate metabolic process GO:0019637 597 0.032
negative regulation of rna metabolic process GO:0051253 262 0.031
nucleoside metabolic process GO:0009116 394 0.031
positive regulation of phosphorus metabolic process GO:0010562 147 0.031
negative regulation of molecular function GO:0044092 68 0.031
nucleoside triphosphate catabolic process GO:0009143 329 0.029
regulation of catalytic activity GO:0050790 307 0.029
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.029
regulation of phosphorus metabolic process GO:0051174 230 0.029
regulation of proteasomal protein catabolic process GO:0061136 34 0.028
rna polymerase ii transcriptional preinitiation complex assembly GO:0051123 40 0.028
regulation of phosphate metabolic process GO:0019220 230 0.028
nucleoside phosphate catabolic process GO:1901292 331 0.027
negative regulation of nucleic acid templated transcription GO:1903507 260 0.027
exocytosis GO:0006887 42 0.027
growth GO:0040007 157 0.026
regulation of response to stress GO:0080134 57 0.026
regulation of intracellular protein transport GO:0033157 13 0.026
regulation of protein modification process GO:0031399 110 0.025
death GO:0016265 30 0.025
regulation of catabolic process GO:0009894 199 0.025
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.024
regulation of cell division GO:0051302 113 0.024
positive regulation of biosynthetic process GO:0009891 336 0.023
cytoskeleton organization GO:0007010 230 0.023
organic cyclic compound catabolic process GO:1901361 499 0.023
ribonucleoside catabolic process GO:0042454 332 0.023
purine nucleoside catabolic process GO:0006152 330 0.023
positive regulation of phosphate metabolic process GO:0045937 147 0.023
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 36 0.022
ribonucleoside triphosphate catabolic process GO:0009203 327 0.022
ribonucleoside triphosphate metabolic process GO:0009199 356 0.022
oxoacid metabolic process GO:0043436 351 0.022
negative regulation of organelle organization GO:0010639 103 0.022
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.022
chromatin organization GO:0006325 242 0.022
nucleic acid transport GO:0050657 94 0.022
negative regulation of signaling GO:0023057 30 0.021
purine ribonucleoside catabolic process GO:0046130 330 0.021
ribonucleoprotein complex subunit organization GO:0071826 152 0.021
purine nucleoside metabolic process GO:0042278 380 0.021
positive regulation of dna templated transcription elongation GO:0032786 42 0.021
regulation of cellular localization GO:0060341 50 0.020
dna repair GO:0006281 236 0.020
regulation of organelle organization GO:0033043 243 0.020
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 40 0.020
carbohydrate derivative catabolic process GO:1901136 339 0.020
ribosome biogenesis GO:0042254 335 0.020
positive regulation of macromolecule metabolic process GO:0010604 394 0.020
positive regulation of transcription initiation from rna polymerase ii promoter GO:0060261 13 0.020
positive regulation of catalytic activity GO:0043085 178 0.020
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.019
positive regulation of rna metabolic process GO:0051254 294 0.019
organelle assembly GO:0070925 118 0.019
cell death GO:0008219 30 0.019
maintenance of location in cell GO:0051651 58 0.018
regulation of kinase activity GO:0043549 71 0.018
nucleotide catabolic process GO:0009166 330 0.018
single organism catabolic process GO:0044712 619 0.018
positive regulation of rna polymerase ii transcriptional preinitiation complex assembly GO:0045899 11 0.018
purine ribonucleotide catabolic process GO:0009154 327 0.017
positive regulation of catabolic process GO:0009896 135 0.017
ribose phosphate metabolic process GO:0019693 384 0.017
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.017
purine ribonucleoside metabolic process GO:0046128 380 0.017
ribosomal large subunit biogenesis GO:0042273 98 0.016
purine containing compound catabolic process GO:0072523 332 0.016
multi organism process GO:0051704 233 0.016
regulation of cellular catabolic process GO:0031329 195 0.016
gene silencing GO:0016458 151 0.016
positive regulation of apoptotic process GO:0043065 3 0.016
intracellular signal transduction GO:0035556 112 0.016
negative regulation of intracellular signal transduction GO:1902532 27 0.016
vesicle organization GO:0016050 68 0.016
regulation of dna templated transcription initiation GO:2000142 19 0.016
positive regulation of cellular component organization GO:0051130 116 0.015
meiotic nuclear division GO:0007126 163 0.015
positive regulation of protein complex assembly GO:0031334 39 0.014
cellular homeostasis GO:0019725 138 0.014
heterocycle catabolic process GO:0046700 494 0.014
nucleoside triphosphate metabolic process GO:0009141 364 0.014
regulation of mitosis GO:0007088 65 0.014
response to external stimulus GO:0009605 158 0.014
purine ribonucleotide metabolic process GO:0009150 372 0.014
ribonucleoprotein complex assembly GO:0022618 143 0.014
ncrna processing GO:0034470 330 0.014
positive regulation of dna templated transcription initiation GO:2000144 13 0.014
ribonucleoside metabolic process GO:0009119 389 0.013
rna export from nucleus GO:0006405 88 0.013
carbohydrate derivative metabolic process GO:1901135 549 0.013
regulation of rna polymerase ii transcriptional preinitiation complex assembly GO:0045898 13 0.013
nuclear export GO:0051168 124 0.013
cellular cation homeostasis GO:0030003 100 0.013
proteasomal ubiquitin independent protein catabolic process GO:0010499 14 0.013
regulation of localization GO:0032879 127 0.013
regulation of intracellular transport GO:0032386 26 0.013
homeostatic process GO:0042592 227 0.013
negative regulation of cell communication GO:0010648 33 0.013
regulation of phosphorylation GO:0042325 86 0.012
cellular developmental process GO:0048869 191 0.012
regulation of protein complex assembly GO:0043254 77 0.012
positive regulation of molecular function GO:0044093 185 0.012
purine nucleotide metabolic process GO:0006163 376 0.012
double strand break repair via nonhomologous end joining GO:0006303 27 0.012
positive regulation of secretion GO:0051047 2 0.012
positive regulation of gene expression GO:0010628 321 0.012
atp metabolic process GO:0046034 251 0.012
cellular chemical homeostasis GO:0055082 123 0.012
endomembrane system organization GO:0010256 74 0.012
negative regulation of phosphorus metabolic process GO:0010563 49 0.011
response to chemical GO:0042221 390 0.011
nucleoside catabolic process GO:0009164 335 0.011
positive regulation of programmed cell death GO:0043068 3 0.011
ribonucleoside monophosphate catabolic process GO:0009158 224 0.011
rna catabolic process GO:0006401 118 0.011
regulation of mitotic cell cycle GO:0007346 107 0.011
regulation of gene expression epigenetic GO:0040029 147 0.011
nucleotide excision repair GO:0006289 50 0.010
negative regulation of cellular biosynthetic process GO:0031327 312 0.010
rna localization GO:0006403 112 0.010
regulation of translation GO:0006417 89 0.010
transcription elongation from rna polymerase ii promoter GO:0006368 81 0.010
purine nucleoside triphosphate metabolic process GO:0009144 356 0.010

RPN13 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org