Saccharomyces cerevisiae

24 known processes

LSM3 (YLR438C-A)

Lsm3p

(Aliases: USS2,SMX4)

LSM3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 109 0.999
rna splicing via transesterification reactions GO:0000375 118 0.999
mrna splicing via spliceosome GO:0000398 108 0.998
mrna metabolic process GO:0016071 269 0.998
rna splicing GO:0008380 131 0.996
mrna processing GO:0006397 185 0.995
ribonucleoprotein complex assembly GO:0022618 143 0.868
Fly
spliceosomal snrnp assembly GO:0000387 6 0.568
organic cyclic compound catabolic process GO:1901361 499 0.567
heterocycle catabolic process GO:0046700 494 0.527
aromatic compound catabolic process GO:0019439 491 0.519
spliceosomal complex assembly GO:0000245 21 0.432
ribonucleoprotein complex subunit organization GO:0071826 152 0.360
Fly
cellular nitrogen compound catabolic process GO:0044270 494 0.300
spliceosomal tri snrnp complex assembly GO:0000244 4 0.299
ribosome biogenesis GO:0042254 335 0.295
macromolecule catabolic process GO:0009057 383 0.281
ribosomal small subunit biogenesis GO:0042274 124 0.243
nucleobase containing compound catabolic process GO:0034655 479 0.227
maturation of ssu rrna GO:0030490 105 0.219
mrna catabolic process GO:0006402 93 0.206
ncrna processing GO:0034470 330 0.180
rrna processing GO:0006364 227 0.161
cytoskeleton organization GO:0007010 230 0.153
meiotic nuclear division GO:0007126 163 0.131
ribonucleoside metabolic process GO:0009119 389 0.124
ribonucleotide catabolic process GO:0009261 327 0.121
organelle assembly GO:0070925 118 0.118
Fly
purine ribonucleotide metabolic process GO:0009150 372 0.100
meiotic cell cycle GO:0051321 272 0.100
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.095
protein complex biogenesis GO:0070271 314 0.095
purine nucleotide catabolic process GO:0006195 328 0.087
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.087
translation GO:0006412 230 0.082
purine containing compound catabolic process GO:0072523 332 0.081
purine nucleoside metabolic process GO:0042278 380 0.076
translational initiation GO:0006413 56 0.076
snorna processing GO:0043144 34 0.071
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.068
nucleoside triphosphate metabolic process GO:0009141 364 0.068
purine nucleotide metabolic process GO:0006163 376 0.064
purine nucleoside triphosphate metabolic process GO:0009144 356 0.061
negative regulation of cellular metabolic process GO:0031324 407 0.059
glycosyl compound catabolic process GO:1901658 335 0.059
nuclear transcribed mrna catabolic process GO:0000956 89 0.055
nucleotide metabolic process GO:0009117 453 0.054
organelle fission GO:0048285 272 0.054
carbohydrate derivative metabolic process GO:1901135 549 0.053
organophosphate catabolic process GO:0046434 338 0.053
protein ubiquitination GO:0016567 118 0.053
organophosphate metabolic process GO:0019637 597 0.051
cellular macromolecule catabolic process GO:0044265 363 0.051
purine nucleoside triphosphate catabolic process GO:0009146 329 0.050
mitotic cell cycle process GO:1903047 294 0.050
nuclear division GO:0000280 263 0.050
regulation of translation GO:0006417 89 0.049
vesicle mediated transport GO:0016192 335 0.048
ribonucleoside triphosphate catabolic process GO:0009203 327 0.047
purine ribonucleoside metabolic process GO:0046128 380 0.047
organonitrogen compound catabolic process GO:1901565 404 0.047
mitotic cell cycle GO:0000278 306 0.045
rrna metabolic process GO:0016072 244 0.044
ribonucleoside monophosphate catabolic process GO:0009158 224 0.043
mitotic spindle organization GO:0007052 30 0.043
ribonucleoside catabolic process GO:0042454 332 0.040
negative regulation of biosynthetic process GO:0009890 312 0.039
regulation of organelle organization GO:0033043 243 0.038
purine ribonucleotide catabolic process GO:0009154 327 0.038
negative regulation of cellular biosynthetic process GO:0031327 312 0.038
nucleotide catabolic process GO:0009166 330 0.038
ribonucleotide metabolic process GO:0009259 377 0.036
ribonucleoside triphosphate metabolic process GO:0009199 356 0.036
generation of catalytic spliceosome for first transesterification step GO:0000349 9 0.034
regulation of cell division GO:0051302 113 0.033
spliceosomal conformational changes to generate catalytic conformation GO:0000393 20 0.031
atp metabolic process GO:0046034 251 0.030
protein modification by small protein conjugation GO:0032446 144 0.029
establishment of ribosome localization GO:0033753 46 0.028
positive regulation of rna metabolic process GO:0051254 294 0.028
rna catabolic process GO:0006401 118 0.028
negative regulation of gene expression GO:0010629 312 0.027
regulation of mrna splicing via spliceosome GO:0048024 3 0.026
atp catabolic process GO:0006200 224 0.026
regulation of biological quality GO:0065008 391 0.026
vacuole organization GO:0007033 75 0.025
purine ribonucleoside catabolic process GO:0046130 330 0.025
nucleoside monophosphate metabolic process GO:0009123 267 0.024
purine nucleoside catabolic process GO:0006152 330 0.024
nucleoside triphosphate catabolic process GO:0009143 329 0.024
regulation of cell cycle process GO:0010564 150 0.024
regulation of cellular catabolic process GO:0031329 195 0.023
positive regulation of dna templated transcription elongation GO:0032786 42 0.023
regulation of protein metabolic process GO:0051246 237 0.022
ribosome localization GO:0033750 46 0.022
nucleoside phosphate metabolic process GO:0006753 458 0.022
response to organic cyclic compound GO:0014070 1 0.022
nucleobase containing small molecule metabolic process GO:0055086 491 0.022
nucleoside catabolic process GO:0009164 335 0.022
regulation of cell cycle GO:0051726 195 0.021
ribonucleoprotein complex localization GO:0071166 46 0.021
regulation of translational initiation GO:0006446 18 0.021
purine containing compound metabolic process GO:0072521 400 0.020
posttranscriptional regulation of gene expression GO:0010608 115 0.020
cellular component movement GO:0006928 20 0.019
negative regulation of rna metabolic process GO:0051253 262 0.019
protein complex assembly GO:0006461 302 0.018
regulation of cellular component organization GO:0051128 334 0.017
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.017
regulation of dna templated transcription elongation GO:0032784 44 0.017
cell cycle g1 s phase transition GO:0044843 64 0.017
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.017
regulation of nuclear division GO:0051783 103 0.016
ribosomal subunit export from nucleus GO:0000054 46 0.016
apoptotic process GO:0006915 30 0.016
negative regulation of macromolecule metabolic process GO:0010605 375 0.016
negative regulation of protein metabolic process GO:0051248 85 0.016
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.016
ribonucleoprotein complex export from nucleus GO:0071426 46 0.016
response to organic substance GO:0010033 182 0.015
rrna containing ribonucleoprotein complex export from nucleus GO:0071428 46 0.015
purine nucleoside monophosphate catabolic process GO:0009128 224 0.015
nucleoside monophosphate catabolic process GO:0009125 224 0.015
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 40 0.015
developmental process GO:0032502 261 0.015
Worm
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.015
nucleoside phosphate catabolic process GO:1901292 331 0.014
negative regulation of cellular protein metabolic process GO:0032269 85 0.014
maintenance of location GO:0051235 66 0.014
macromolecule methylation GO:0043414 85 0.014
death GO:0016265 30 0.014
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.014
regulation of purine nucleotide metabolic process GO:1900542 109 0.013
single organism catabolic process GO:0044712 619 0.013
response to heat GO:0009408 69 0.013
regulation of catalytic activity GO:0050790 307 0.013
ion transport GO:0006811 274 0.013
single organism developmental process GO:0044767 258 0.013
Worm
purine nucleoside monophosphate metabolic process GO:0009126 262 0.012
transcription initiation from rna polymerase ii promoter GO:0006367 55 0.012
carbohydrate derivative catabolic process GO:1901136 339 0.012
microtubule based process GO:0007017 117 0.012
protein modification by small protein conjugation or removal GO:0070647 172 0.012
negative regulation of cellular catabolic process GO:0031330 43 0.012
protein alkylation GO:0008213 48 0.011
conjugation with cellular fusion GO:0000747 106 0.011
rna phosphodiester bond hydrolysis GO:0090501 112 0.011
maintenance of protein location in cell GO:0032507 50 0.011
negative regulation of mitotic cell cycle phase transition GO:1901991 57 0.011
negative regulation of nucleic acid templated transcription GO:1903507 260 0.011
response to pheromone involved in conjugation with cellular fusion GO:0000749 74 0.011
nitrogen compound transport GO:0071705 212 0.011
nucleoside metabolic process GO:0009116 394 0.011
mitotic cell cycle phase transition GO:0044772 141 0.011
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.010
positive regulation of translation GO:0045727 34 0.010
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.010
gtp catabolic process GO:0006184 107 0.010
establishment of organelle localization GO:0051656 96 0.010

LSM3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.035