Saccharomyces cerevisiae

64 known processes

RIO1 (YOR119C)

Rio1p

(Aliases: RRP10)

RIO1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
ncrna processing GO:0034470 330 0.977
rrna metabolic process GO:0016072 244 0.971
ribosome biogenesis GO:0042254 335 0.950
rrna processing GO:0006364 227 0.934
ribosomal small subunit biogenesis GO:0042274 124 0.851
cleavage involved in rrna processing GO:0000469 69 0.685
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 96 0.636
snorna metabolic process GO:0016074 40 0.559
ncrna 3 end processing GO:0043628 44 0.467
maturation of ssu rrna GO:0030490 105 0.457
endonucleolytic cleavage in its1 to separate ssu rrna from 5 8s rrna and lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000447 43 0.431
transcription from rna polymerase i promoter GO:0006360 63 0.248
endonucleolytic cleavage to generate mature 5 end of ssu rrna from ssu rrna 5 8s rrna lsu rrna GO:0000472 31 0.222
regulation of meiotic cell cycle GO:0051445 43 0.211
maturation of 5 8s rrna GO:0000460 80 0.208
rna phosphodiester bond hydrolysis GO:0090501 112 0.203
endonucleolytic cleavage involved in rrna processing GO:0000478 47 0.201
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.185
endonucleolytic cleavage of tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000479 47 0.174
rna localization GO:0006403 112 0.171
regulation of protein metabolic process GO:0051246 237 0.168
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.166
mrna metabolic process GO:0016071 269 0.165
snorna processing GO:0043144 34 0.131
cellular amino acid metabolic process GO:0006520 225 0.130
regulation of cellular protein metabolic process GO:0032268 232 0.124
mrna processing GO:0006397 185 0.109
regulation of dna replication GO:0006275 51 0.102
ribonucleoprotein complex subunit organization GO:0071826 152 0.096
protein modification by small protein conjugation GO:0032446 144 0.094
modification dependent macromolecule catabolic process GO:0043632 203 0.093
nucleocytoplasmic transport GO:0006913 163 0.091
protein localization to organelle GO:0033365 337 0.091
regulation of organelle organization GO:0033043 243 0.090
negative regulation of cellular metabolic process GO:0031324 407 0.090
endonucleolytic cleavage in 5 ets of tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000480 30 0.087
regulation of nuclear division GO:0051783 103 0.083
ribonucleoprotein complex localization GO:0071166 46 0.080
nuclear transport GO:0051169 165 0.079
regulation of cell cycle process GO:0010564 150 0.079
ribonucleoprotein complex assembly GO:0022618 143 0.076
regulation of cell division GO:0051302 113 0.074
negative regulation of dna replication GO:0008156 15 0.072
rna 3 end processing GO:0031123 88 0.070
ribosomal subunit export from nucleus GO:0000054 46 0.068
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.065
meiotic cell cycle GO:0051321 272 0.065
mitochondrion organization GO:0007005 261 0.063
telomere maintenance GO:0000723 74 0.062
peptidyl amino acid modification GO:0018193 116 0.062
ncrna 5 end processing GO:0034471 32 0.061
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.061
protein catabolic process GO:0030163 221 0.058
nuclear export GO:0051168 124 0.057
telomere maintenance via telomere lengthening GO:0010833 22 0.056
positive regulation of transport GO:0051050 32 0.056
rrna 5 end processing GO:0000967 32 0.055
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.055
membrane organization GO:0061024 276 0.054
rrna catabolic process GO:0016075 31 0.052
rna transport GO:0050658 92 0.051
transcription from rna polymerase iii promoter GO:0006383 40 0.051
carboxylic acid metabolic process GO:0019752 338 0.049
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 109 0.049
rna 5 end processing GO:0000966 33 0.048
rrna containing ribonucleoprotein complex export from nucleus GO:0071428 46 0.047
macromolecule catabolic process GO:0009057 383 0.046
negative regulation of chromosome organization GO:2001251 39 0.046
protein ubiquitination GO:0016567 118 0.044
meiotic cell cycle process GO:1903046 229 0.043
nuclear mrna surveillance GO:0071028 22 0.042
cell cycle phase transition GO:0044770 144 0.042
regulation of protein modification process GO:0031399 110 0.042
snrna 3 end processing GO:0034472 16 0.040
aromatic compound catabolic process GO:0019439 491 0.040
heterocycle catabolic process GO:0046700 494 0.040
regulation of cellular component organization GO:0051128 334 0.040
snrna processing GO:0016180 17 0.039
regulation of biological quality GO:0065008 391 0.039
regulation of meiosis GO:0040020 42 0.039
polyadenylation dependent ncrna catabolic process GO:0043634 20 0.037
ribonucleoprotein complex export from nucleus GO:0071426 46 0.037
phosphorylation GO:0016310 291 0.037
cell cycle checkpoint GO:0000075 82 0.036
nuclear division GO:0000280 263 0.036
protein modification by small protein conjugation or removal GO:0070647 172 0.035
negative regulation of dna metabolic process GO:0051053 36 0.035
dna templated transcription initiation GO:0006352 71 0.034
telomere maintenance via telomerase GO:0007004 21 0.034
cellular protein catabolic process GO:0044257 213 0.034
chromatin silencing GO:0006342 147 0.032
cellular response to chemical stimulus GO:0070887 315 0.032
signal transduction GO:0007165 208 0.032
rna splicing via transesterification reactions GO:0000375 118 0.031
negative regulation of cellular biosynthetic process GO:0031327 312 0.031
protein processing GO:0016485 64 0.031
nuclear ncrna surveillance GO:0071029 20 0.031
cellular homeostasis GO:0019725 138 0.031
cellular nitrogen compound catabolic process GO:0044270 494 0.029
establishment of ribosome localization GO:0033753 46 0.028
rna dependent dna replication GO:0006278 25 0.028
actin cytoskeleton organization GO:0030036 100 0.028
negative regulation of macromolecule metabolic process GO:0010605 375 0.028
growth GO:0040007 157 0.028
autophagy GO:0006914 106 0.028
cellular developmental process GO:0048869 191 0.028
Fly
cellular macromolecule catabolic process GO:0044265 363 0.028
dna replication GO:0006260 147 0.027
homeostatic process GO:0042592 227 0.027
response to abiotic stimulus GO:0009628 159 0.027
cell division GO:0051301 205 0.027
nuclear rna surveillance GO:0071027 30 0.027
telomere organization GO:0032200 75 0.026
dna dependent dna replication GO:0006261 115 0.026
regulation of protein maturation GO:1903317 34 0.026
trna modification GO:0006400 75 0.026
regulation of catabolic process GO:0009894 199 0.026
regulation of cellular catabolic process GO:0031329 195 0.026
positive regulation of cellular component organization GO:0051130 116 0.026
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.026
organelle localization GO:0051640 128 0.025
response to oxidative stress GO:0006979 99 0.025
positive regulation of intracellular transport GO:0032388 4 0.025
rna catabolic process GO:0006401 118 0.025
response to organic cyclic compound GO:0014070 1 0.025
organic cyclic compound catabolic process GO:1901361 499 0.025
positive regulation of nucleocytoplasmic transport GO:0046824 4 0.024
mitotic spindle checkpoint GO:0071174 34 0.024
mitotic cell cycle GO:0000278 306 0.024
anatomical structure homeostasis GO:0060249 74 0.024
methylation GO:0032259 101 0.024
rna surveillance GO:0071025 30 0.024
regulation of protein localization GO:0032880 62 0.023
regulation of response to stimulus GO:0048583 157 0.023
negative regulation of cell cycle GO:0045786 91 0.023
negative regulation of organelle organization GO:0010639 103 0.023
nucleic acid transport GO:0050657 94 0.023
mrna splicing via spliceosome GO:0000398 108 0.023
purine ribonucleoside metabolic process GO:0046128 380 0.022
regulation of cellular localization GO:0060341 50 0.022
single organism carbohydrate metabolic process GO:0044723 237 0.021
nucleobase containing compound transport GO:0015931 124 0.021
modification dependent protein catabolic process GO:0019941 181 0.021
rna export from nucleus GO:0006405 88 0.021
negative regulation of biosynthetic process GO:0009890 312 0.021
positive regulation of organelle organization GO:0010638 85 0.021
chromatin silencing at silent mating type cassette GO:0030466 53 0.021
cell cycle g1 s phase transition GO:0044843 64 0.021
negative regulation of homeostatic process GO:0032845 7 0.020
macromolecule methylation GO:0043414 85 0.020
regulation of catalytic activity GO:0050790 307 0.020
negative regulation of mitotic cell cycle GO:0045930 63 0.020
regulation of molecular function GO:0065009 320 0.020
single organism membrane organization GO:0044802 275 0.020
anatomical structure development GO:0048856 160 0.020
Fly
cellular component morphogenesis GO:0032989 97 0.020
protein maturation GO:0051604 76 0.019
multi organism process GO:0051704 233 0.019
regulation of cellular component biogenesis GO:0044087 112 0.019
regulation of transferase activity GO:0051338 83 0.019
cellular component disassembly GO:0022411 86 0.019
negative regulation of mitotic metaphase anaphase transition GO:0045841 23 0.019
nucleotide metabolic process GO:0009117 453 0.019
protein complex localization GO:0031503 32 0.019
intracellular protein transport GO:0006886 319 0.019
rna methylation GO:0001510 39 0.018
rrna transcription GO:0009303 31 0.018
regulation of proteolysis GO:0030162 44 0.018
negative regulation of mitotic cell cycle phase transition GO:1901991 57 0.018
regulation of cellular component size GO:0032535 50 0.018
regulation of localization GO:0032879 127 0.018
protein alkylation GO:0008213 48 0.018
mitotic cell cycle checkpoint GO:0007093 56 0.018
nucleobase containing compound catabolic process GO:0034655 479 0.018
negative regulation of meiotic cell cycle GO:0051447 24 0.017
purine containing compound metabolic process GO:0072521 400 0.017
cell communication GO:0007154 345 0.017
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.017
proteolysis GO:0006508 268 0.017
exonucleolytic trimming involved in rrna processing GO:0000459 19 0.017
single organism cellular localization GO:1902580 375 0.017
protein targeting to membrane GO:0006612 52 0.017
rrna 3 end processing GO:0031125 22 0.017
positive regulation of protein modification process GO:0031401 49 0.017
regulation of protein complex assembly GO:0043254 77 0.017
regulation of transport GO:0051049 85 0.017
transcription dependent tethering of rna polymerase ii gene dna at nuclear periphery GO:0000972 19 0.017
positive regulation of cellular biosynthetic process GO:0031328 336 0.017
regulation of translation GO:0006417 89 0.016
response to osmotic stress GO:0006970 83 0.016
maturation of lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000463 33 0.016
purine nucleotide catabolic process GO:0006195 328 0.016
nitrogen compound transport GO:0071705 212 0.016
regulation of protein modification by small protein conjugation or removal GO:1903320 29 0.016
cut catabolic process GO:0071034 12 0.016
regulation of dna dependent dna replication GO:0090329 37 0.016
regulation of phosphate metabolic process GO:0019220 230 0.016
regulation of mitotic cell cycle phase transition GO:1901990 68 0.016
response to heat GO:0009408 69 0.016
protein phosphorylation GO:0006468 197 0.015
establishment of organelle localization GO:0051656 96 0.015
ribonucleoside triphosphate metabolic process GO:0009199 356 0.015
cellular response to oxidative stress GO:0034599 94 0.015
positive regulation of apoptotic process GO:0043065 3 0.015
single organism reproductive process GO:0044702 159 0.015
ribonucleoside monophosphate metabolic process GO:0009161 265 0.015
positive regulation of cell death GO:0010942 3 0.015
purine ribonucleotide catabolic process GO:0009154 327 0.014
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.014
establishment of protein localization to organelle GO:0072594 278 0.014
carbohydrate metabolic process GO:0005975 252 0.014
posttranscriptional regulation of gene expression GO:0010608 115 0.014
establishment of rna localization GO:0051236 92 0.014
mitotic cell cycle phase transition GO:0044772 141 0.014
cellular response to nutrient levels GO:0031669 144 0.014
regulation of cellular amino acid metabolic process GO:0006521 16 0.014
cut metabolic process GO:0071043 12 0.014
nucleoside phosphate metabolic process GO:0006753 458 0.014
transcription of nuclear large rrna transcript from rna polymerase i promoter GO:0042790 19 0.014
negative regulation of cell cycle phase transition GO:1901988 59 0.014
nuclear polyadenylation dependent cut catabolic process GO:0071039 10 0.014
cellular response to external stimulus GO:0071496 150 0.014
carbohydrate derivative metabolic process GO:1901135 549 0.014
meiotic nuclear division GO:0007126 163 0.014
anatomical structure formation involved in morphogenesis GO:0048646 136 0.014
regulation of dna templated transcription in response to stress GO:0043620 51 0.014
nucleobase containing small molecule metabolic process GO:0055086 491 0.014
polyadenylation dependent rna catabolic process GO:0043633 22 0.014
cellular amine metabolic process GO:0044106 51 0.014
purine nucleoside monophosphate catabolic process GO:0009128 224 0.014
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.014
organophosphate metabolic process GO:0019637 597 0.014
cellular response to starvation GO:0009267 90 0.014
positive regulation of protein metabolic process GO:0051247 93 0.013
purine ribonucleoside catabolic process GO:0046130 330 0.013
u4 snrna 3 end processing GO:0034475 11 0.013
positive regulation of ras protein signal transduction GO:0046579 3 0.013
positive regulation of programmed cell death GO:0043068 3 0.013
rrna export from nucleus GO:0006407 18 0.013
endocytosis GO:0006897 90 0.013
response to chemical GO:0042221 390 0.013
negative regulation of molecular function GO:0044092 68 0.013
regulation of dna recombination GO:0000018 24 0.013
box c d snorna metabolic process GO:0033967 12 0.013
reproductive process GO:0022414 248 0.013
positive regulation of cytoplasmic transport GO:1903651 4 0.013
nucleotide catabolic process GO:0009166 330 0.013
maturation of lsu rrna GO:0000470 39 0.013
protein localization to nucleus GO:0034504 74 0.013
nuclear polyadenylation dependent rrna catabolic process GO:0071035 18 0.013
purine nucleoside metabolic process GO:0042278 380 0.013
termination of rna polymerase ii transcription poly a coupled GO:0030846 10 0.013
signaling GO:0023052 208 0.013
positive regulation of translation GO:0045727 34 0.012
negative regulation of gene expression GO:0010629 312 0.012
single organism catabolic process GO:0044712 619 0.012
regulation of cell cycle GO:0051726 195 0.012
box c d snorna processing GO:0034963 12 0.012
regulation of intracellular transport GO:0032386 26 0.012
positive regulation of cell cycle GO:0045787 32 0.012
cellular ketone metabolic process GO:0042180 63 0.012
ribosomal small subunit assembly GO:0000028 15 0.012
purine nucleoside catabolic process GO:0006152 330 0.012
exonucleolytic trimming to generate mature 3 end of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000467 18 0.012
g1 s transition of mitotic cell cycle GO:0000082 64 0.012
dna templated transcriptional preinitiation complex assembly GO:0070897 51 0.012
regulation of gene expression epigenetic GO:0040029 147 0.012
organic acid metabolic process GO:0006082 352 0.012
developmental process involved in reproduction GO:0003006 159 0.012
nucleoside monophosphate catabolic process GO:0009125 224 0.012
regulation of dna metabolic process GO:0051052 100 0.012
protein complex assembly GO:0006461 302 0.012
positive regulation of gene expression GO:0010628 321 0.012
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.012
regulation of autophagy GO:0010506 18 0.012
purine nucleoside monophosphate metabolic process GO:0009126 262 0.011
nucleoside catabolic process GO:0009164 335 0.011
nuclear transcribed mrna catabolic process exonucleolytic 3 5 GO:0034427 11 0.011
protein methylation GO:0006479 48 0.011
regulation of protein processing GO:0070613 34 0.011
negative regulation of catalytic activity GO:0043086 60 0.011
actin filament based process GO:0030029 104 0.011
negative regulation of transcription dna templated GO:0045892 258 0.011
ribosomal small subunit export from nucleus GO:0000056 13 0.011
regulation of cellular amine metabolic process GO:0033238 21 0.011
negative regulation of metaphase anaphase transition of cell cycle GO:1902100 23 0.011
negative regulation of chromosome segregation GO:0051985 25 0.011
generation of precursor metabolites and energy GO:0006091 147 0.011
single organism signaling GO:0044700 208 0.011
regulation of hydrolase activity GO:0051336 133 0.011
peptidyl lysine methylation GO:0018022 24 0.011
amine metabolic process GO:0009308 51 0.011
regulation of protein catabolic process GO:0042176 40 0.011
regulation of anatomical structure size GO:0090066 50 0.011
trna metabolic process GO:0006399 151 0.011
nucleus organization GO:0006997 62 0.011
positive regulation of catabolic process GO:0009896 135 0.011
negative regulation of mitotic sister chromatid segregation GO:0033048 24 0.011
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.011
nucleoside triphosphate metabolic process GO:0009141 364 0.011
nucleoside metabolic process GO:0009116 394 0.011
reproductive process in single celled organism GO:0022413 145 0.011
cell differentiation GO:0030154 161 0.011
Fly
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.011
regulation of chromosome organization GO:0033044 66 0.011
regulation of proteasomal protein catabolic process GO:0061136 34 0.011
regulation of dna repair GO:0006282 14 0.011
mitotic cell cycle process GO:1903047 294 0.011
ubiquitin dependent protein catabolic process GO:0006511 181 0.010
regulation of transcription from rna polymerase iii promoter GO:0006359 16 0.010
regulation of cell cycle phase transition GO:1901987 70 0.010
peptidyl lysine modification GO:0018205 77 0.010
regulation of response to external stimulus GO:0032101 20 0.010
purine nucleoside triphosphate metabolic process GO:0009144 356 0.010
regulation of cellular ketone metabolic process GO:0010565 42 0.010
regulation of nucleotide metabolic process GO:0006140 110 0.010
hyperosmotic response GO:0006972 19 0.010

RIO1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org