|
|
dna templated transcription initiation
|
GO:0006352 |
71 |
0.847
|
|
|
|
dna templated transcriptional preinitiation complex assembly
|
GO:0070897 |
51 |
0.538
|
|
|
|
rna polymerase ii transcriptional preinitiation complex assembly
|
GO:0051123 |
40 |
0.347
|
|
|
|
regulation of transcription from rna polymerase ii promoter
|
GO:0006357 |
394 |
0.320
|
|
|
|
transcription elongation from rna polymerase ii promoter
|
GO:0006368 |
81 |
0.229
|
|
|
|
transcription initiation from rna polymerase ii promoter
|
GO:0006367 |
55 |
0.165
|
|
|
|
positive regulation of biosynthetic process
|
GO:0009891 |
336 |
0.163
|
|
|
|
organophosphate metabolic process
|
GO:0019637 |
597 |
0.156
|
|
|
|
positive regulation of macromolecule biosynthetic process
|
GO:0010557 |
325 |
0.149
|
|
|
|
positive regulation of nucleobase containing compound metabolic process
|
GO:0045935 |
409 |
0.143
|
|
|
|
positive regulation of cellular biosynthetic process
|
GO:0031328 |
336 |
0.139
|
|
|
|
nucleoside phosphate metabolic process
|
GO:0006753 |
458 |
0.137
|
|
|
|
regulation of transcription elongation from rna polymerase ii promoter
|
GO:0034243 |
40 |
0.134
|
|
|
|
positive regulation of gene expression
|
GO:0010628 |
321 |
0.116
|
|
|
|
nucleotide metabolic process
|
GO:0009117 |
453 |
0.108
|
|
|
|
trna processing
|
GO:0008033 |
101 |
0.104
|
|
|
|
positive regulation of rna biosynthetic process
|
GO:1902680 |
286 |
0.101
|
|
|
|
positive regulation of macromolecule metabolic process
|
GO:0010604 |
394 |
0.099
|
|
|
|
positive regulation of nucleic acid templated transcription
|
GO:1903508 |
286 |
0.089
|
|
|
|
response to oxidative stress
|
GO:0006979 |
99 |
0.088
|
|
|
|
positive regulation of nitrogen compound metabolic process
|
GO:0051173 |
412 |
0.085
|
|
|
|
nuclear transport
|
GO:0051169 |
165 |
0.079
|
|
|
|
protein localization to organelle
|
GO:0033365 |
337 |
0.078
|
|
|
|
regulation of biological quality
|
GO:0065008 |
391 |
0.078
|
|
|
|
membrane organization
|
GO:0061024 |
276 |
0.074
|
|
|
|
nucleobase containing compound catabolic process
|
GO:0034655 |
479 |
0.071
|
|
|
|
single organism membrane organization
|
GO:0044802 |
275 |
0.071
|
|
|
|
positive regulation of transcription from rna polymerase ii promoter
|
GO:0045944 |
252 |
0.064
|
|
|
|
rna splicing
|
GO:0008380 |
131 |
0.062
|
|
|
|
rna splicing via transesterification reactions
|
GO:0000375 |
118 |
0.059
|
|
|
|
translation
|
GO:0006412 |
230 |
0.058
|
|
|
|
nitrogen compound transport
|
GO:0071705 |
212 |
0.058
|
|
|
|
dna templated transcription elongation
|
GO:0006354 |
91 |
0.055
|
|
|
|
cellular macromolecule catabolic process
|
GO:0044265 |
363 |
0.055
|
|
|
|
trna metabolic process
|
GO:0006399 |
151 |
0.055
|
|
|
|
cellular amino acid metabolic process
|
GO:0006520 |
225 |
0.054
|
|
|
|
ribonucleoprotein complex subunit organization
|
GO:0071826 |
152 |
0.054
|
|
|
|
organic cyclic compound catabolic process
|
GO:1901361 |
499 |
0.051
|
|
|
|
nucleoside monophosphate metabolic process
|
GO:0009123 |
267 |
0.050
|
|
|
|
nucleobase containing small molecule metabolic process
|
GO:0055086 |
491 |
0.048
|
|
|
|
aromatic compound catabolic process
|
GO:0019439 |
491 |
0.048
|
|
|
|
protein dna complex assembly
|
GO:0065004 |
105 |
0.047
|
|
|
|
single organism catabolic process
|
GO:0044712 |
619 |
0.045
|
|
|
|
positive regulation of transcription elongation from rna polymerase ii promoter
|
GO:0032968 |
38 |
0.045
|
|
|
|
glycosyl compound metabolic process
|
GO:1901657 |
398 |
0.044
|
|
|
|
cytoplasmic translation
|
GO:0002181 |
65 |
0.044
|
|
|
|
transcription from rna polymerase iii promoter
|
GO:0006383 |
40 |
0.041
|
|
|
|
regulation of translation
|
GO:0006417 |
89 |
0.037
|
|
|
|
cell communication
|
GO:0007154 |
345 |
0.036
|
|
|
|
dna repair
|
GO:0006281 |
236 |
0.036
|
|
|
|
protein dna complex subunit organization
|
GO:0071824 |
153 |
0.036
|
|
|
|
single organism developmental process
|
GO:0044767 |
258 |
0.035
|
|
|
|
protein phosphorylation
|
GO:0006468 |
197 |
0.034
|
|
|
|
cofactor metabolic process
|
GO:0051186 |
126 |
0.034
|
|
|
|
regulation of dna templated transcription elongation
|
GO:0032784 |
44 |
0.034
|
|
|
|
response to chemical
|
GO:0042221 |
390 |
0.034
|
|
|
|
nucleoside triphosphate catabolic process
|
GO:0009143 |
329 |
0.032
|
|
|
|
nucleoside metabolic process
|
GO:0009116 |
394 |
0.032
|
|
|
|
mrna processing
|
GO:0006397 |
185 |
0.032
|
|
|
|
positive regulation of transcription dna templated
|
GO:0045893 |
286 |
0.031
|
|
|
|
organonitrogen compound catabolic process
|
GO:1901565 |
404 |
0.031
|
|
|
|
response to osmotic stress
|
GO:0006970 |
83 |
0.030
|
|
|
|
heterocycle catabolic process
|
GO:0046700 |
494 |
0.030
|
|
|
|
response to abiotic stimulus
|
GO:0009628 |
159 |
0.030
|
|
|
|
nucleoside catabolic process
|
GO:0009164 |
335 |
0.030
|
|
|
|
positive regulation of rna metabolic process
|
GO:0051254 |
294 |
0.030
|
|
|
|
purine ribonucleotide catabolic process
|
GO:0009154 |
327 |
0.030
|
|
|
|
organonitrogen compound biosynthetic process
|
GO:1901566 |
314 |
0.029
|
|
|
|
regulation of cellular protein metabolic process
|
GO:0032268 |
232 |
0.029
|
|
|
|
ribonucleotide metabolic process
|
GO:0009259 |
377 |
0.029
|
|
|
|
organic acid metabolic process
|
GO:0006082 |
352 |
0.029
|
|
|
|
dna recombination
|
GO:0006310 |
172 |
0.029
|
|
|
|
transposition
|
GO:0032196 |
20 |
0.028
|
|
|
|
ribose phosphate metabolic process
|
GO:0019693 |
384 |
0.028
|
|
|
|
protein modification by small protein conjugation or removal
|
GO:0070647 |
172 |
0.028
|
|
|
|
carbohydrate derivative metabolic process
|
GO:1901135 |
549 |
0.028
|
|
|
|
purine ribonucleoside monophosphate metabolic process
|
GO:0009167 |
262 |
0.027
|
|
|
|
cellular response to chemical stimulus
|
GO:0070887 |
315 |
0.027
|
|
|
|
carbohydrate derivative catabolic process
|
GO:1901136 |
339 |
0.026
|
|
|
|
atp metabolic process
|
GO:0046034 |
251 |
0.026
|
|
|
|
ribonucleoside catabolic process
|
GO:0042454 |
332 |
0.026
|
|
|
|
regulation of molecular function
|
GO:0065009 |
320 |
0.025
|
|
|
|
regulation of protein metabolic process
|
GO:0051246 |
237 |
0.025
|
|
|
|
ribonucleoside triphosphate catabolic process
|
GO:0009203 |
327 |
0.025
|
|
|
|
cellular protein catabolic process
|
GO:0044257 |
213 |
0.025
|
|
|
|
nucleobase containing compound transport
|
GO:0015931 |
124 |
0.025
|
|
|
|
cellular homeostasis
|
GO:0019725 |
138 |
0.025
|
|
|
|
oxoacid metabolic process
|
GO:0043436 |
351 |
0.025
|
|
|
|
protein localization to nucleus
|
GO:0034504 |
74 |
0.024
|
|
|
|
ribonucleoside monophosphate metabolic process
|
GO:0009161 |
265 |
0.024
|
|
|
|
purine containing compound metabolic process
|
GO:0072521 |
400 |
0.023
|
|
|
|
developmental process
|
GO:0032502 |
261 |
0.023
|
|
|
|
ribonucleoside triphosphate metabolic process
|
GO:0009199 |
356 |
0.023
|
|
|
|
cellular nitrogen compound catabolic process
|
GO:0044270 |
494 |
0.023
|
|
|
|
regulation of phosphate metabolic process
|
GO:0019220 |
230 |
0.023
|
|
|
|
positive regulation of transcription initiation from rna polymerase ii promoter
|
GO:0060261 |
13 |
0.022
|
|
|
|
phosphorylation
|
GO:0016310 |
291 |
0.022
|
|
|
|
cellular lipid metabolic process
|
GO:0044255 |
229 |
0.022
|
|
|
|
transition metal ion homeostasis
|
GO:0055076 |
59 |
0.022
|
|
|
|
purine ribonucleoside triphosphate catabolic process
|
GO:0009207 |
327 |
0.022
|
|
|
|
macromolecule catabolic process
|
GO:0009057 |
383 |
0.022
|
|
|
|
purine ribonucleotide metabolic process
|
GO:0009150 |
372 |
0.021
|
|
|
|
mrna 3 end processing
|
GO:0031124 |
54 |
0.021
|
|
|
|
response to starvation
|
GO:0042594 |
96 |
0.021
|
|
|
|
response to organic cyclic compound
|
GO:0014070 |
1 |
0.020
|
|
|
|
purine ribonucleoside triphosphate metabolic process
|
GO:0009205 |
354 |
0.020
|
|
|
|
ubiquitin dependent protein catabolic process
|
GO:0006511 |
181 |
0.020
|
|
|
|
response to hypoxia
|
GO:0001666 |
4 |
0.020
|
|
|
|
purine nucleoside monophosphate metabolic process
|
GO:0009126 |
262 |
0.020
|
|
|
|
regulation of transcription initiation from rna polymerase ii promoter
|
GO:0060260 |
19 |
0.020
|
|
|
|
regulation of dna templated transcription in response to stress
|
GO:0043620 |
51 |
0.019
|
|
|
|
nucleoside monophosphate catabolic process
|
GO:0009125 |
224 |
0.019
|
|
|
|
cellular response to oxidative stress
|
GO:0034599 |
94 |
0.019
|
|
|
|
rna splicing via transesterification reactions with bulged adenosine as nucleophile
|
GO:0000377 |
109 |
0.019
|
|
|
|
dna templated transcriptional open complex formation
|
GO:0001112 |
7 |
0.018
|
|
|
|
glycosyl compound catabolic process
|
GO:1901658 |
335 |
0.018
|
|
|
|
coenzyme metabolic process
|
GO:0006732 |
104 |
0.018
|
|
|
|
protein catabolic process
|
GO:0030163 |
221 |
0.018
|
|
|
|
purine nucleoside triphosphate metabolic process
|
GO:0009144 |
356 |
0.018
|
|
|
|
trna modification
|
GO:0006400 |
75 |
0.018
|
|
|
|
cellular response to starvation
|
GO:0009267 |
90 |
0.018
|
|
|
|
regulation of catalytic activity
|
GO:0050790 |
307 |
0.018
|
|
|
|
carbohydrate derivative biosynthetic process
|
GO:1901137 |
181 |
0.018
|
|
|
|
phospholipid metabolic process
|
GO:0006644 |
125 |
0.018
|
|
|
|
regulation of mitotic cell cycle phase transition
|
GO:1901990 |
68 |
0.018
|
|
|
|
posttranscriptional regulation of gene expression
|
GO:0010608 |
115 |
0.017
|
|
|
|
macromolecular complex disassembly
|
GO:0032984 |
80 |
0.017
|
|
|
|
purine nucleoside metabolic process
|
GO:0042278 |
380 |
0.017
|
|
|
|
purine nucleoside triphosphate catabolic process
|
GO:0009146 |
329 |
0.017
|
|
|
|
nucleoside phosphate catabolic process
|
GO:1901292 |
331 |
0.017
|
|
|
|
rna localization
|
GO:0006403 |
112 |
0.017
|
|
|
|
purine ribonucleoside catabolic process
|
GO:0046130 |
330 |
0.017
|
|
|
|
mrna metabolic process
|
GO:0016071 |
269 |
0.017
|
|
|
|
monocarboxylic acid metabolic process
|
GO:0032787 |
122 |
0.017
|
|
|
|
cellular component disassembly
|
GO:0022411 |
86 |
0.017
|
|
|
|
translational initiation
|
GO:0006413 |
56 |
0.017
|
|
|
|
regulation of protein complex assembly
|
GO:0043254 |
77 |
0.016
|
|
|
|
rna transport
|
GO:0050658 |
92 |
0.016
|
|
|
|
proteasome mediated ubiquitin dependent protein catabolic process
|
GO:0043161 |
137 |
0.016
|
|
|
|
mrna splicing via spliceosome
|
GO:0000398 |
108 |
0.016
|
|
|
|
atp catabolic process
|
GO:0006200 |
224 |
0.016
|
|
|
|
mitotic cell cycle process
|
GO:1903047 |
294 |
0.016
|
|
|
|
response to external stimulus
|
GO:0009605 |
158 |
0.016
|
|
|
|
positive regulation of catabolic process
|
GO:0009896 |
135 |
0.016
|
|
|
|
purine nucleoside catabolic process
|
GO:0006152 |
330 |
0.016
|
|
|
|
small molecule biosynthetic process
|
GO:0044283 |
258 |
0.016
|
|
|
|
snorna metabolic process
|
GO:0016074 |
40 |
0.015
|
|
|
|
dna geometric change
|
GO:0032392 |
43 |
0.015
|
|
|
|
cell fate commitment
|
GO:0045165 |
32 |
0.015
|
|
|
|
purine nucleotide metabolic process
|
GO:0006163 |
376 |
0.015
|
|
|
|
carboxylic acid metabolic process
|
GO:0019752 |
338 |
0.015
|
|
|
|
purine ribonucleoside monophosphate catabolic process
|
GO:0009169 |
224 |
0.015
|
|
|
|
endomembrane system organization
|
GO:0010256 |
74 |
0.015
|
|
|
|
positive regulation of dna templated transcription elongation
|
GO:0032786 |
42 |
0.015
|
|
|
|
organophosphate biosynthetic process
|
GO:0090407 |
182 |
0.015
|
|
|
|
oxidation reduction process
|
GO:0055114 |
353 |
0.015
|
|
|
|
dephosphorylation
|
GO:0016311 |
127 |
0.014
|
|
|
|
nucleocytoplasmic transport
|
GO:0006913 |
163 |
0.014
|
|
|
|
regulation of phosphorus metabolic process
|
GO:0051174 |
230 |
0.014
|
|
|
|
nucleic acid phosphodiester bond hydrolysis
|
GO:0090305 |
194 |
0.014
|
|
|
|
peptidyl amino acid modification
|
GO:0018193 |
116 |
0.014
|
|
|
|
regulation of transcription from rna polymerase ii promoter in response to stress
|
GO:0043618 |
51 |
0.014
|
|
|
|
golgi vesicle transport
|
GO:0048193 |
188 |
0.014
|
|
|
|
proteolysis involved in cellular protein catabolic process
|
GO:0051603 |
198 |
0.014
|
|
|
|
single organism signaling
|
GO:0044700 |
208 |
0.014
|
|
|
|
pyruvate metabolic process
|
GO:0006090 |
37 |
0.013
|
|
|
|
mrna cleavage
|
GO:0006379 |
26 |
0.013
|
|
|
|
single organism cellular localization
|
GO:1902580 |
375 |
0.013
|
|
|
|
ribonucleoside monophosphate catabolic process
|
GO:0009158 |
224 |
0.013
|
|
|
|
mrna transport
|
GO:0051028 |
60 |
0.013
|
|
|
|
protein modification by small protein conjugation
|
GO:0032446 |
144 |
0.013
|
|
|
|
ion homeostasis
|
GO:0050801 |
118 |
0.013
|
|
|
|
lipid metabolic process
|
GO:0006629 |
269 |
0.013
|
|
|
|
response to organic substance
|
GO:0010033 |
182 |
0.013
|
|
|
|
rna 3 end processing
|
GO:0031123 |
88 |
0.013
|
|
|
|
regulation of cellular catabolic process
|
GO:0031329 |
195 |
0.013
|
|
|
|
purine nucleoside monophosphate catabolic process
|
GO:0009128 |
224 |
0.013
|
|
|
|
nucleotide excision repair
|
GO:0006289 |
50 |
0.013
|
|
|
|
cellular response to extracellular stimulus
|
GO:0031668 |
150 |
0.013
|
|
|
|
nucleotide biosynthetic process
|
GO:0009165 |
79 |
0.012
|
|
|
|
cellular transition metal ion homeostasis
|
GO:0046916 |
59 |
0.012
|
|
|
|
nucleotide catabolic process
|
GO:0009166 |
330 |
0.012
|
|
|
|
ncrna processing
|
GO:0034470 |
330 |
0.012
|
|
|
|
dna duplex unwinding
|
GO:0032508 |
42 |
0.012
|
|
|
|
sister chromatid segregation
|
GO:0000819 |
93 |
0.012
|
|
|
|
cellular cation homeostasis
|
GO:0030003 |
100 |
0.012
|
|
|
|
purine ribonucleoside metabolic process
|
GO:0046128 |
380 |
0.012
|
|
|
|
purine nucleotide catabolic process
|
GO:0006195 |
328 |
0.012
|
|
|
|
response to uv
|
GO:0009411 |
4 |
0.012
|
|
|
|
protein complex disassembly
|
GO:0043241 |
70 |
0.012
|
|
|
|
nucleic acid transport
|
GO:0050657 |
94 |
0.012
|
|
|
|
lipid transport
|
GO:0006869 |
58 |
0.011
|
|
|
|
termination of rna polymerase ii transcription
|
GO:0006369 |
26 |
0.011
|
|
|
|
response to oxygen containing compound
|
GO:1901700 |
61 |
0.011
|
|
|
|
cellular response to organic substance
|
GO:0071310 |
159 |
0.011
|
|
|
|
negative regulation of molecular function
|
GO:0044092 |
68 |
0.011
|
|
|
|
cell death
|
GO:0008219 |
30 |
0.011
|
|
|
|
positive regulation of molecular function
|
GO:0044093 |
185 |
0.011
|
|
|
|
phosphorylation of rna polymerase ii c terminal domain
|
GO:0070816 |
20 |
0.010
|
|
|
|
positive regulation of programmed cell death
|
GO:0043068 |
3 |
0.010
|
|
|
|
positive regulation of apoptotic process
|
GO:0043065 |
3 |
0.010
|
|
|
|
regulation of catabolic process
|
GO:0009894 |
199 |
0.010
|
|
|
|
plasma membrane organization
|
GO:0007009 |
21 |
0.010
|
|