Saccharomyces cerevisiae

29 known processes

PRP4 (YPR178W)

Prp4p

(Aliases: RNA4)

PRP4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
mrna splicing via spliceosome GO:0000398 108 1.000
rna splicing via transesterification reactions GO:0000375 118 1.000
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 109 1.000
mrna processing GO:0006397 185 0.999
rna splicing GO:0008380 131 0.998
mrna metabolic process GO:0016071 269 0.992
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.242
positive regulation of rna biosynthetic process GO:1902680 286 0.221
cellular nitrogen compound catabolic process GO:0044270 494 0.191
organic cyclic compound catabolic process GO:1901361 499 0.180
heterocycle catabolic process GO:0046700 494 0.155
spliceosomal complex assembly GO:0000245 21 0.145
organelle fission GO:0048285 272 0.135
Worm
nucleobase containing compound catabolic process GO:0034655 479 0.128
positive regulation of biosynthetic process GO:0009891 336 0.111
aromatic compound catabolic process GO:0019439 491 0.109
meiotic nuclear division GO:0007126 163 0.107
Worm
growth GO:0040007 157 0.105
protein transport GO:0015031 345 0.090
positive regulation of cellular biosynthetic process GO:0031328 336 0.079
spliceosomal conformational changes to generate catalytic conformation GO:0000393 20 0.074
establishment of protein localization GO:0045184 367 0.074
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.074
organonitrogen compound catabolic process GO:1901565 404 0.066
positive regulation of nucleic acid templated transcription GO:1903508 286 0.066
nucleotide metabolic process GO:0009117 453 0.066
purine ribonucleoside metabolic process GO:0046128 380 0.059
nuclear division GO:0000280 263 0.056
Worm
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.054
regulation of cell cycle GO:0051726 195 0.051
Worm
purine nucleoside metabolic process GO:0042278 380 0.048
positive regulation of transcription dna templated GO:0045893 286 0.048
nucleoside monophosphate metabolic process GO:0009123 267 0.045
regulation of cellular component organization GO:0051128 334 0.045
Worm
single organism developmental process GO:0044767 258 0.042
Zebrafish Worm
intracellular protein transport GO:0006886 319 0.041
organophosphate metabolic process GO:0019637 597 0.039
nucleoside phosphate catabolic process GO:1901292 331 0.038
cytoskeleton organization GO:0007010 230 0.037
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.036
positive regulation of rna metabolic process GO:0051254 294 0.036
protein complex biogenesis GO:0070271 314 0.035
purine containing compound metabolic process GO:0072521 400 0.034
developmental process GO:0032502 261 0.034
Zebrafish Worm
nucleobase containing small molecule metabolic process GO:0055086 491 0.033
purine nucleotide metabolic process GO:0006163 376 0.032
ribonucleoside catabolic process GO:0042454 332 0.031
protein complex assembly GO:0006461 302 0.031
spliceosomal tri snrnp complex assembly GO:0000244 4 0.031
regulation of biological quality GO:0065008 391 0.030
positive regulation of gene expression GO:0010628 321 0.030
purine ribonucleoside catabolic process GO:0046130 330 0.030
purine nucleoside catabolic process GO:0006152 330 0.030
ribonucleoside monophosphate metabolic process GO:0009161 265 0.029
nucleotide catabolic process GO:0009166 330 0.029
purine nucleoside triphosphate metabolic process GO:0009144 356 0.028
cell division GO:0051301 205 0.027
Worm
glycosyl compound catabolic process GO:1901658 335 0.027
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.026
vesicle mediated transport GO:0016192 335 0.026
mitotic cell cycle GO:0000278 306 0.026
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.026
nucleoside catabolic process GO:0009164 335 0.026
spliceosomal snrnp assembly GO:0000387 6 0.025
ribonucleotide catabolic process GO:0009261 327 0.025
nucleoside triphosphate catabolic process GO:0009143 329 0.025
purine nucleotide catabolic process GO:0006195 328 0.024
mitotic nuclear division GO:0007067 131 0.024
cellular macromolecule catabolic process GO:0044265 363 0.024
nucleoside phosphate metabolic process GO:0006753 458 0.024
regulation of cell cycle process GO:0010564 150 0.023
Worm
ribonucleoside metabolic process GO:0009119 389 0.023
protein localization to organelle GO:0033365 337 0.023
cell differentiation GO:0030154 161 0.022
Worm
carbohydrate derivative metabolic process GO:1901135 549 0.022
fungal type cell wall organization or biogenesis GO:0071852 169 0.022
ribonucleotide metabolic process GO:0009259 377 0.022
regulation of organelle organization GO:0033043 243 0.021
Worm
protein modification by small protein conjugation GO:0032446 144 0.020
cell development GO:0048468 107 0.019
Worm
external encapsulating structure organization GO:0045229 146 0.019
spindle organization GO:0007051 37 0.019
oxoacid metabolic process GO:0043436 351 0.018
single organism catabolic process GO:0044712 619 0.018
regulation of cell division GO:0051302 113 0.018
Worm
fungal type cell wall organization GO:0031505 145 0.018
purine nucleoside triphosphate catabolic process GO:0009146 329 0.017
anatomical structure formation involved in morphogenesis GO:0048646 136 0.017
negative regulation of cellular metabolic process GO:0031324 407 0.017
protein modification by small protein conjugation or removal GO:0070647 172 0.016
ncrna processing GO:0034470 330 0.016
mitotic cell cycle process GO:1903047 294 0.016
glycosyl compound metabolic process GO:1901657 398 0.016
purine nucleoside monophosphate metabolic process GO:0009126 262 0.016
nucleoside triphosphate metabolic process GO:0009141 364 0.016
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.016
cellular response to chemical stimulus GO:0070887 315 0.015
regulation of catabolic process GO:0009894 199 0.015
homeostatic process GO:0042592 227 0.015
nucleoside metabolic process GO:0009116 394 0.015
response to organic substance GO:0010033 182 0.015
cellular developmental process GO:0048869 191 0.014
Worm
cellular response to organic substance GO:0071310 159 0.014
purine nucleoside monophosphate catabolic process GO:0009128 224 0.014
ribose phosphate metabolic process GO:0019693 384 0.013
atp catabolic process GO:0006200 224 0.013
cellular response to topologically incorrect protein GO:0035967 32 0.013
regulation of mrna splicing via spliceosome GO:0048024 3 0.013
regulation of hydrolase activity GO:0051336 133 0.012
multi organism cellular process GO:0044764 120 0.012
membrane organization GO:0061024 276 0.012
cell wall organization or biogenesis GO:0071554 190 0.012
cell wall organization GO:0071555 146 0.012
protein targeting GO:0006605 272 0.011
anatomical structure morphogenesis GO:0009653 160 0.011
carbohydrate derivative catabolic process GO:1901136 339 0.011
macromolecule catabolic process GO:0009057 383 0.011
organic acid metabolic process GO:0006082 352 0.011
meiotic cell cycle GO:0051321 272 0.011
Worm
negative regulation of signaling GO:0023057 30 0.011
peroxisome organization GO:0007031 68 0.011
cellular component movement GO:0006928 20 0.011
Worm
dna recombination GO:0006310 172 0.010
regulation of nuclear division GO:0051783 103 0.010
Worm
response to chemical GO:0042221 390 0.010
cellular lipid metabolic process GO:0044255 229 0.010
regulation of anatomical structure size GO:0090066 50 0.010

PRP4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.040
Human
nervous system disease DOID:863 0 0.017
Human