Danio rerio

0 known processes

lrig3

leucine-rich repeats and immunoglobulin-like domains 3

lrig3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.243
embryonic organ development GO:0048568 381 0.134
central nervous system development GO:0007417 387 0.127
cellular nitrogen compound metabolic process GO:0034641 290 0.125
notochord development GO:0030903 54 0.114
regulation of cellular metabolic process GO:0031323 320 0.104
regulation of multicellular organismal process GO:0051239 277 0.099
regulation of nitrogen compound metabolic process GO:0051171 251 0.087
signal transduction GO:0007165 455 0.082
organic cyclic compound metabolic process GO:1901360 301 0.073
positive regulation of transport GO:0051050 2 0.072
organic cyclic compound biosynthetic process GO:1901362 223 0.070
regulation of biosynthetic process GO:0009889 250 0.069
regulation of cellular biosynthetic process GO:0031326 245 0.067
positive regulation of biological process GO:0048518 253 0.067
response to drug GO:0042493 3 0.066
response to chemical GO:0042221 320 0.062
regulation of macromolecule metabolic process GO:0060255 317 0.060
female sex differentiation GO:0046660 4 0.056
nucleobase containing compound metabolic process GO:0006139 274 0.055
regulation of gene expression GO:0010468 265 0.055
biosynthetic process GO:0009058 294 0.054
transport GO:0006810 220 0.053
cellular component morphogenesis GO:0032989 336 0.053
regulation of primary metabolic process GO:0080090 311 0.052
nitrogen compound metabolic process GO:0006807 319 0.052
cell surface receptor signaling pathway GO:0007166 325 0.051
determination of bilateral symmetry GO:0009855 204 0.049
regulation of transcription dna templated GO:0006355 213 0.047
cellular macromolecule biosynthetic process GO:0034645 224 0.046
aromatic compound biosynthetic process GO:0019438 217 0.045
response to external stimulus GO:0009605 264 0.044
gene expression GO:0010467 252 0.044
cell part morphogenesis GO:0032990 246 0.044
dorsal ventral pattern formation GO:0009953 125 0.043
regulation of signaling GO:0023051 235 0.042
amine metabolic process GO:0009308 2 0.040
regulation of myotube differentiation GO:0010830 2 0.040
transcription dna templated GO:0006351 181 0.039
regulation of metabolic process GO:0019222 359 0.039
single organism localization GO:1902578 225 0.039
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.039
head development GO:0060322 303 0.039
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.038
stem cell maintenance GO:0019827 4 0.038
heterocycle biosynthetic process GO:0018130 215 0.037
heterocycle metabolic process GO:0046483 290 0.036
nucleic acid templated transcription GO:0097659 181 0.035
regulation of protein catabolic process GO:0042176 1 0.034
cellular protein catabolic process GO:0044257 4 0.033
maintenance of location GO:0051235 4 0.033
single organism organelle organization GO:1902589 199 0.033
stem cell proliferation GO:0072089 4 0.032
neuron differentiation GO:0030182 353 0.032
morphogenesis of an epithelium GO:0002009 333 0.032
nucleobase containing compound biosynthetic process GO:0034654 205 0.032
embryonic organ morphogenesis GO:0048562 274 0.031
negative regulation of wnt signaling pathway GO:0030178 30 0.031
phosphate containing compound metabolic process GO:0006796 108 0.031
immune system development GO:0002520 191 0.030
guanosine containing compound metabolic process GO:1901068 4 0.030
chordate embryonic development GO:0043009 271 0.030
regulation of response to stimulus GO:0048583 269 0.030
cell projection morphogenesis GO:0048858 244 0.030
adherens junction organization GO:0034332 4 0.030
multicellular organismal macromolecule metabolic process GO:0044259 2 0.030
positive regulation of cellular process GO:0048522 201 0.030
cell morphogenesis GO:0000902 289 0.029
establishment of organelle localization GO:0051656 45 0.029
regulation of biological quality GO:0065008 263 0.029
axonogenesis GO:0007409 152 0.029
hepaticobiliary system development GO:0061008 98 0.029
muscle structure development GO:0061061 196 0.029
adult behavior GO:0030534 2 0.029
cellular macromolecule metabolic process GO:0044260 391 0.028
proteasomal protein catabolic process GO:0010498 2 0.028
regulation of biomineral tissue development GO:0070167 2 0.028
embryo development ending in birth or egg hatching GO:0009792 271 0.028
lipid homeostasis GO:0055088 3 0.027
establishment of localization GO:0051234 244 0.027
hematopoietic or lymphoid organ development GO:0048534 191 0.027
immune system process GO:0002376 241 0.026
sensory organ development GO:0007423 393 0.026
cell fate commitment GO:0045165 99 0.026
phosphorus metabolic process GO:0006793 109 0.026
positive regulation of cellular amine metabolic process GO:0033240 0 0.026
regulation of rna metabolic process GO:0051252 224 0.026
cellular biosynthetic process GO:0044249 286 0.026
positive regulation of cell cycle GO:0045787 3 0.026
peptidyl serine phosphorylation GO:0018105 1 0.026
regulation of binding GO:0051098 3 0.025
cellular amine metabolic process GO:0044106 2 0.025
nucleocytoplasmic transport GO:0006913 4 0.025
organonitrogen compound metabolic process GO:1901564 74 0.025
regulation of cellular amino acid metabolic process GO:0006521 0 0.025
brain development GO:0007420 293 0.025
gland development GO:0048732 143 0.025
regulation of reproductive process GO:2000241 4 0.025
regulation of cellular amine metabolic process GO:0033238 0 0.025
wnt signaling pathway GO:0016055 80 0.025
regulation of reactive oxygen species metabolic process GO:2000377 2 0.024
enzyme linked receptor protein signaling pathway GO:0007167 106 0.024
cellular response to chemical stimulus GO:0070887 157 0.024
positive regulation of myeloid cell differentiation GO:0045639 2 0.024
endosomal transport GO:0016197 2 0.023
eye development GO:0001654 277 0.023
specification of symmetry GO:0009799 204 0.023
nucleic acid metabolic process GO:0090304 244 0.023
homeostatic process GO:0042592 142 0.023
positive regulation of secretion GO:0051047 1 0.023
aging GO:0007568 2 0.023
mitotic dna integrity checkpoint GO:0044774 4 0.022
response to organic substance GO:0010033 153 0.022
regulation of multicellular organismal development GO:2000026 223 0.022
positive regulation of catabolic process GO:0009896 4 0.022
gastrulation GO:0007369 208 0.022
mesenchymal cell proliferation GO:0010463 1 0.022
modification dependent protein catabolic process GO:0019941 3 0.022
guanosine containing compound catabolic process GO:1901069 2 0.022
single organism metabolic process GO:0044710 217 0.021
behavior GO:0007610 74 0.021
response to uv GO:0009411 3 0.021
organophosphate metabolic process GO:0019637 37 0.021
negative regulation of protein phosphorylation GO:0001933 4 0.021
stem cell division GO:0017145 1 0.021
developmental growth involved in morphogenesis GO:0060560 86 0.021
determination of left right symmetry GO:0007368 179 0.021
embryonic skeletal joint morphogenesis GO:0060272 3 0.021
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.021
growth GO:0040007 174 0.021
regulation of signal transduction GO:0009966 225 0.020
cellular aromatic compound metabolic process GO:0006725 295 0.020
mitotic cell cycle GO:0000278 64 0.020
purine containing compound metabolic process GO:0072521 29 0.020
mitotic cell cycle process GO:1903047 48 0.020
nucleobase containing small molecule metabolic process GO:0055086 32 0.020
response to alkaloid GO:0043279 2 0.020
regulation of phosphorus metabolic process GO:0051174 43 0.020
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.020
positive regulation of cellular catabolic process GO:0031331 3 0.020
negative regulation of response to stimulus GO:0048585 104 0.019
regulation of tube size GO:0035150 2 0.019
extrinsic apoptotic signaling pathway GO:0097191 3 0.019
negative regulation of cellular process GO:0048523 283 0.019
regulation of macromolecule biosynthetic process GO:0010556 225 0.019
regulation of nucleic acid templated transcription GO:1903506 213 0.019
positive regulation of cellular component biogenesis GO:0044089 3 0.019
neuron projection morphogenesis GO:0048812 161 0.018
neuron projection development GO:0031175 180 0.018
ion transport GO:0006811 114 0.018
autophagy GO:0006914 4 0.018
regeneration GO:0031099 91 0.018
g1 s transition of mitotic cell cycle GO:0000082 1 0.018
regulation of mitotic cell cycle GO:0007346 25 0.018
regionalization GO:0003002 274 0.018
phospholipase c activating g protein coupled receptor signaling pathway GO:0007200 2 0.018
response to stress GO:0006950 263 0.018
developmental growth GO:0048589 166 0.018
regulation of blood vessel size GO:0050880 2 0.018
development of primary female sexual characteristics GO:0046545 4 0.018
tissue remodeling GO:0048771 4 0.018
cell morphogenesis involved in differentiation GO:0000904 195 0.018
protein import GO:0017038 3 0.018
single organism transport GO:0044765 206 0.018
negative regulation of protein serine threonine kinase activity GO:0071901 2 0.018
embryonic skeletal joint development GO:0072498 3 0.018
determination of dorsal ventral asymmetry GO:0048262 34 0.018
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.018
positive regulation of epithelial cell proliferation GO:0050679 1 0.017
regulation of cytokine production GO:0001817 3 0.017
negative regulation of biological process GO:0048519 304 0.017
gtp metabolic process GO:0046039 4 0.017
organelle organization GO:0006996 227 0.017
digestive tract morphogenesis GO:0048546 231 0.017
negative regulation of signal transduction GO:0009968 94 0.017
regulation of cellular ketone metabolic process GO:0010565 7 0.017
gtp catabolic process GO:0006184 2 0.017
organic substance biosynthetic process GO:1901576 289 0.017
wound healing GO:0042060 90 0.017
sister chromatid cohesion GO:0007062 2 0.017
peptidyl serine modification GO:0018209 2 0.017
muscle organ development GO:0007517 101 0.017
multi organism process GO:0051704 134 0.017
eye morphogenesis GO:0048592 144 0.017
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.017
connective tissue development GO:0061448 99 0.016
nuclear transport GO:0051169 4 0.016
regulation of cell differentiation GO:0045595 142 0.016
regulation of developmental process GO:0050793 247 0.016
nucleoside monophosphate catabolic process GO:0009125 4 0.016
regulation of stem cell proliferation GO:0072091 2 0.016
nucleotide metabolic process GO:0009117 28 0.016
mononuclear cell proliferation GO:0032943 1 0.016
ribonucleoside monophosphate catabolic process GO:0009158 4 0.016
small molecule metabolic process GO:0044281 77 0.016
regulation of sequestering of calcium ion GO:0051282 4 0.016
meiotic cell cycle process GO:1903046 3 0.016
female gonad development GO:0008585 4 0.016
negative regulation of cellular catabolic process GO:0031330 3 0.016
forebrain development GO:0030900 96 0.016
cellular component movement GO:0006928 335 0.016
positive regulation of cell communication GO:0010647 56 0.016
transcription from rna polymerase ii promoter GO:0006366 80 0.016
hormone secretion GO:0046879 2 0.016
ameboidal type cell migration GO:0001667 143 0.016
positive regulation of epithelial cell differentiation GO:0030858 2 0.016
ubiquitin dependent protein catabolic process GO:0006511 3 0.016
modification dependent macromolecule catabolic process GO:0043632 3 0.016
regulation of cell communication GO:0010646 232 0.016
somatic stem cell maintenance GO:0035019 1 0.015
regulation of locomotion GO:0040012 55 0.015
negative regulation of signaling GO:0023057 96 0.015
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.015
heart morphogenesis GO:0003007 156 0.015
sensory organ morphogenesis GO:0090596 200 0.015
ion transmembrane transport GO:0034220 91 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.015
response to glucocorticoid GO:0051384 1 0.015
response to corticosteroid GO:0031960 1 0.015
mitotic dna damage checkpoint GO:0044773 4 0.015
mitochondrion organization GO:0007005 4 0.015
myotube differentiation GO:0014902 45 0.015
organic acid metabolic process GO:0006082 31 0.015
skeletal muscle organ development GO:0060538 78 0.015
somite development GO:0061053 96 0.015
negative regulation of cell communication GO:0010648 96 0.015
establishment of protein localization to organelle GO:0072594 4 0.015
macromolecule biosynthetic process GO:0009059 227 0.015
generation of neurons GO:0048699 385 0.015
cyclic nucleotide metabolic process GO:0009187 18 0.015
regulation of nucleotide catabolic process GO:0030811 2 0.015
positive regulation of cell division GO:0051781 2 0.014
protein import into nucleus GO:0006606 3 0.014
rna metabolic process GO:0016070 219 0.014
embryonic heart tube morphogenesis GO:0003143 108 0.014
regulation of protein complex assembly GO:0043254 3 0.014
localization of cell GO:0051674 244 0.014
tube morphogenesis GO:0035239 349 0.014
response to nicotine GO:0035094 2 0.014
cellular response to radiation GO:0071478 4 0.014
protein secretion GO:0009306 1 0.014
cytosolic calcium ion transport GO:0060401 3 0.014
cellular amino acid metabolic process GO:0006520 7 0.014
negative regulation of macromolecule metabolic process GO:0010605 76 0.014
muscle fiber development GO:0048747 52 0.014
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.014
bmp signaling pathway GO:0030509 52 0.014
regulation of organ growth GO:0046620 3 0.014
developmental cell growth GO:0048588 52 0.014
regulation of skeletal muscle tissue development GO:0048641 4 0.014
odontogenesis of dentin containing tooth GO:0042475 1 0.014
synaptic growth at neuromuscular junction GO:0051124 2 0.014
regulation of cellular protein catabolic process GO:1903362 1 0.014
negative regulation of catabolic process GO:0009895 3 0.014
camera type eye morphogenesis GO:0048593 108 0.014
positive regulation of mesenchymal cell proliferation GO:0002053 1 0.014
positive regulation of cytoskeleton organization GO:0051495 3 0.014
regulation of protein targeting GO:1903533 2 0.014
notochord morphogenesis GO:0048570 17 0.014
blood vessel development GO:0001568 246 0.014
regulation of metal ion transport GO:0010959 4 0.013
embryonic cranial skeleton morphogenesis GO:0048701 90 0.013
microtubule organizing center organization GO:0031023 1 0.013
regulation of rna biosynthetic process GO:2001141 213 0.013
negative regulation of epithelial cell proliferation GO:0050680 1 0.013
pathway restricted smad protein phosphorylation GO:0060389 1 0.013
positive regulation of peptidyl tyrosine phosphorylation GO:0050731 1 0.013
regulation of autophagy GO:0010506 3 0.013
positive regulation of secretion by cell GO:1903532 1 0.013
regulation of purine nucleotide catabolic process GO:0033121 2 0.013
death GO:0016265 121 0.013
macromolecule modification GO:0043412 111 0.013
cellular nitrogen compound biosynthetic process GO:0044271 218 0.013
cell death GO:0008219 121 0.013
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 2 0.013
positive regulation of biosynthetic process GO:0009891 68 0.013
convergent extension GO:0060026 118 0.013
single organism nuclear import GO:1902593 3 0.013
nuclear import GO:0051170 3 0.013
regulation of mesenchymal cell proliferation GO:0010464 1 0.013
phagocytosis GO:0006909 3 0.013
cellular response to external stimulus GO:0071496 2 0.013
protein modification process GO:0036211 100 0.013
regulation of cytoplasmic transport GO:1903649 4 0.013
protein metabolic process GO:0019538 183 0.013
protein homooligomerization GO:0051260 3 0.013
regulation of endothelial cell proliferation GO:0001936 1 0.013
embryonic skeletal system morphogenesis GO:0048704 93 0.013
cell cycle g1 s phase transition GO:0044843 1 0.013
heart development GO:0007507 313 0.013
negative regulation of cytokine production GO:0001818 1 0.013
locomotion GO:0040011 313 0.013
regulation of nucleoside metabolic process GO:0009118 2 0.013
regulation of epithelial cell proliferation GO:0050678 3 0.013
reactive oxygen species metabolic process GO:0072593 6 0.013
neural crest cell differentiation GO:0014033 72 0.013
response to glucose GO:0009749 3 0.013
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.013
myotube cell development GO:0014904 35 0.013
regulation of wnt signaling pathway GO:0030111 53 0.013
skeletal system morphogenesis GO:0048705 102 0.012
cell migration GO:0016477 237 0.012
hemopoiesis GO:0030097 183 0.012
negative regulation of extrinsic apoptotic signaling pathway GO:2001237 2 0.012
regulation of cell death GO:0010941 103 0.012
mesenchymal cell differentiation GO:0048762 87 0.012
positive regulation of multicellular organismal process GO:0051240 52 0.012
multicellular organism growth GO:0035264 4 0.012
rna biosynthetic process GO:0032774 181 0.012
negative regulation of multicellular organismal process GO:0051241 69 0.012
cellular protein modification process GO:0006464 100 0.012
negative regulation of developmental process GO:0051093 65 0.012
cartilage development GO:0051216 96 0.012
inner ear development GO:0048839 126 0.012
rhythmic process GO:0048511 21 0.012
positive regulation of cytokine production GO:0001819 2 0.012
negative regulation of map kinase activity GO:0043407 2 0.012
cell substrate junction assembly GO:0007044 2 0.012
negative regulation of mapk cascade GO:0043409 4 0.012
response to abiotic stimulus GO:0009628 122 0.012
cellular localization GO:0051641 97 0.012
regulation of synapse organization GO:0050807 3 0.011
phosphorylation GO:0016310 69 0.011
regulation of microtubule cytoskeleton organization GO:0070507 3 0.011
ventricular cardiac muscle tissue morphogenesis GO:0055010 2 0.011
actin polymerization or depolymerization GO:0008154 2 0.011
cell projection organization GO:0030030 284 0.011
positive regulation of gene expression GO:0010628 71 0.011
cellular component disassembly GO:0022411 1 0.011
negative regulation of kinase activity GO:0033673 4 0.011
cell migration involved in gastrulation GO:0042074 79 0.011
mesenchyme development GO:0060485 127 0.011
cilium morphogenesis GO:0060271 85 0.011
sequestering of calcium ion GO:0051208 3 0.011
oocyte maturation GO:0001556 4 0.011
lymphocyte proliferation GO:0046651 1 0.011
atp catabolic process GO:0006200 4 0.011
regulation of calcium ion transport GO:0051924 2 0.011
regulation of gtpase activity GO:0043087 2 0.011
protein targeting to nucleus GO:0044744 3 0.011
cellular response to reactive oxygen species GO:0034614 2 0.011
meiotic nuclear division GO:0007126 4 0.011
regulation of receptor activity GO:0010469 2 0.011
regulation of apoptotic process GO:0042981 98 0.011
peptidyl threonine phosphorylation GO:0018107 1 0.011
erythrocyte homeostasis GO:0034101 55 0.011
cellular response to organic substance GO:0071310 105 0.011
positive regulation of wound healing GO:0090303 1 0.011
response to carbohydrate GO:0009743 3 0.011
digestive system development GO:0055123 289 0.011
regulation of programmed cell death GO:0043067 101 0.011
regulation of protein import into nucleus GO:0042306 2 0.011
response to hexose GO:0009746 3 0.011
homeostasis of number of cells GO:0048872 62 0.011
embryonic limb morphogenesis GO:0030326 2 0.011
protein stabilization GO:0050821 2 0.011
morphogenesis of an epithelial fold GO:0060571 1 0.010
cell cycle process GO:0022402 53 0.010
tissue regeneration GO:0042246 74 0.010
inorganic anion transport GO:0015698 25 0.010
transmembrane receptor protein serine threonine kinase signaling pathway GO:0007178 68 0.010
nephron tubule morphogenesis GO:0072078 1 0.010
collagen metabolic process GO:0032963 2 0.010
cell proliferation GO:0008283 80 0.010
tube closure GO:0060606 1 0.010
regulation of cellular component organization GO:0051128 86 0.010
anterior posterior pattern specification GO:0009952 152 0.010
regulation of gtp catabolic process GO:0033124 2 0.010
muscle cell differentiation GO:0042692 139 0.010
chondrocyte development GO:0002063 4 0.010
negative regulation of apoptotic process GO:0043066 55 0.010
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.010
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.010
regulation of synapse assembly GO:0051963 3 0.010
cytokinesis GO:0000910 3 0.010
cellular component assembly GO:0022607 170 0.010

lrig3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.018
cancer DOID:162 0 0.013
disease of cellular proliferation DOID:14566 0 0.013
bone disease DOID:0080001 0 0.012
musculoskeletal system disease DOID:17 0 0.012
connective tissue disease DOID:65 0 0.012