Danio rerio

0 known processes

snrnp40

small nuclear ribonucleoprotein 40 (U5)

(Aliases: MGC56312,wdr57,zgc:56312)

snrnp40 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.519
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.307
cellular macromolecule metabolic process GO:0044260 391 0.252
alternative mrna splicing via spliceosome GO:0000380 1 0.241
nucleobase containing compound metabolic process GO:0006139 274 0.221
heterocycle metabolic process GO:0046483 290 0.213
organic cyclic compound metabolic process GO:1901360 301 0.203
rna export from nucleus GO:0006405 1 0.199
cellular aromatic compound metabolic process GO:0006725 295 0.197
regulation of cellular metabolic process GO:0031323 320 0.187
cellular nitrogen compound metabolic process GO:0034641 290 0.181
gene expression GO:0010467 252 0.180
mrna export from nucleus GO:0006406 1 0.177
positive regulation of mrna splicing via spliceosome GO:0048026 1 0.177
positive regulation of cellular process GO:0048522 201 0.175
mrna transport GO:0051028 2 0.156
rna localization GO:0006403 4 0.141
regulation of gene expression GO:0010468 265 0.139
negative regulation of cellular process GO:0048523 283 0.139
nucleic acid metabolic process GO:0090304 244 0.138
positive regulation of biological process GO:0048518 253 0.138
regulation of primary metabolic process GO:0080090 311 0.126
rna biosynthetic process GO:0032774 181 0.120
regulation of rna metabolic process GO:0051252 224 0.111
aging GO:0007568 2 0.108
nitrogen compound metabolic process GO:0006807 319 0.108
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.106
regulation of mrna processing GO:0050684 3 0.103
rna metabolic process GO:0016070 219 0.102
nucleocytoplasmic transport GO:0006913 4 0.092
positive regulation of mrna metabolic process GO:1903313 2 0.090
regulation of nitrogen compound metabolic process GO:0051171 251 0.087
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 10 0.086
negative regulation of biological process GO:0048519 304 0.086
regulation of macromolecule metabolic process GO:0060255 317 0.084
regulation of metabolic process GO:0019222 359 0.084
locomotion GO:0040011 313 0.074
cellular nitrogen compound biosynthetic process GO:0044271 218 0.074
single organism organelle organization GO:1902589 199 0.073
Fly
dna templated transcription elongation GO:0006354 3 0.072
nucleic acid transport GO:0050657 2 0.070
cellular component biogenesis GO:0044085 178 0.064
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.063
regulation of macromolecule biosynthetic process GO:0010556 225 0.063
macromolecule biosynthetic process GO:0009059 227 0.061
growth GO:0040007 174 0.061
nucleobase containing compound biosynthetic process GO:0034654 205 0.061
chromosome organization GO:0051276 31 0.060
heterocycle biosynthetic process GO:0018130 215 0.058
establishment of rna localization GO:0051236 3 0.057
small gtpase mediated signal transduction GO:0007264 8 0.057
rna transport GO:0050658 2 0.052
positive regulation of macromolecule metabolic process GO:0010604 93 0.052
rna processing GO:0006396 25 0.051
nuclear export GO:0051168 1 0.050
spliceosomal snrnp assembly GO:0000387 2 0.050
regulation of rna splicing GO:0043484 8 0.047
single organism metabolic process GO:0044710 217 0.045
regulation of multicellular organismal development GO:2000026 223 0.045
regulation of cellular ketone metabolic process GO:0010565 7 0.044
establishment of localization GO:0051234 244 0.042
nucleobase containing compound transport GO:0015931 2 0.041
meiotic nuclear division GO:0007126 4 0.041
cellular biosynthetic process GO:0044249 286 0.041
regulation of transcription dna templated GO:0006355 213 0.041
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.041
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.040
organic substance biosynthetic process GO:1901576 289 0.040
regulation of response to stimulus GO:0048583 269 0.039
cellular component assembly GO:0022607 170 0.039
signal transduction GO:0007165 455 0.039
phagocytosis GO:0006909 3 0.038
reproduction GO:0000003 40 0.038
Worm
regulation of mrna splicing via spliceosome GO:0048024 3 0.038
regulation of rna biosynthetic process GO:2001141 213 0.037
establishment of protein localization to organelle GO:0072594 4 0.036
protein localization to nucleus GO:0034504 3 0.036
rna splicing GO:0008380 16 0.036
regulation of cellular biosynthetic process GO:0031326 245 0.035
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.035
positive regulation of mrna processing GO:0050685 1 0.033
organonitrogen compound metabolic process GO:1901564 74 0.033
biosynthetic process GO:0009058 294 0.033
regulation of developmental process GO:0050793 247 0.032
cellular macromolecule biosynthetic process GO:0034645 224 0.032
negative regulation of macromolecule metabolic process GO:0010605 76 0.032
negative regulation of rna metabolic process GO:0051253 48 0.031
fertilization GO:0009566 3 0.031
positive regulation of rna splicing GO:0033120 1 0.031
ras protein signal transduction GO:0007265 7 0.030
organelle organization GO:0006996 227 0.029
Fly
regulation of nucleic acid templated transcription GO:1903506 213 0.029
cellular amine metabolic process GO:0044106 2 0.029
multicellular organism growth GO:0035264 4 0.029
transcription dna templated GO:0006351 181 0.028
multicellular organismal reproductive process GO:0048609 35 0.028
Worm
negative regulation of rna splicing GO:0033119 1 0.028
response to stress GO:0006950 263 0.027
rrna catabolic process GO:0016075 1 0.027
developmental growth GO:0048589 166 0.027
regulation of multicellular organism growth GO:0040014 4 0.027
regulation of multicellular organismal process GO:0051239 277 0.027
regionalization GO:0003002 274 0.026
protein polyubiquitination GO:0000209 4 0.026
negative regulation of mitosis GO:0045839 3 0.026
cell cycle GO:0007049 93 0.026
Fly
amine metabolic process GO:0009308 2 0.025
cellular component morphogenesis GO:0032989 336 0.025
negative regulation of metabolic process GO:0009892 86 0.025
adult behavior GO:0030534 2 0.025
positive regulation of gene expression GO:0010628 71 0.025
negative regulation of cellular metabolic process GO:0031324 77 0.024
protein metabolic process GO:0019538 183 0.024
negative regulation of gene expression GO:0010629 65 0.024
cellular ketone metabolic process GO:0042180 11 0.024
positive regulation of histone modification GO:0031058 1 0.024
regulation of cellular amino acid metabolic process GO:0006521 0 0.024
nucleic acid templated transcription GO:0097659 181 0.023
chromatin modification GO:0016568 21 0.023
spermatid development GO:0007286 2 0.023
aromatic compound biosynthetic process GO:0019438 217 0.023
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.023
positive regulation of cellular amine metabolic process GO:0033240 0 0.023
transcription from rna polymerase ii promoter GO:0006366 80 0.022
cellular component movement GO:0006928 335 0.022
modification dependent macromolecule catabolic process GO:0043632 3 0.022
multi organism process GO:0051704 134 0.021
Worm
organelle assembly GO:0070925 110 0.021
rna splicing via transesterification reactions GO:0000375 10 0.021
rna 3 end processing GO:0031123 2 0.021
regulation of synapse organization GO:0050807 3 0.020
epidermis development GO:0008544 48 0.020
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.020
spliceosomal complex assembly GO:0000245 1 0.020
positive regulation of cellular metabolic process GO:0031325 94 0.020
transport GO:0006810 220 0.020
regulation of signaling GO:0023051 235 0.020
pore complex assembly GO:0046931 2 0.020
regulation of biological quality GO:0065008 263 0.019
membrane invagination GO:0010324 1 0.019
generation of neurons GO:0048699 385 0.018
protein acetylation GO:0006473 2 0.018
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.018
protein targeting to nucleus GO:0044744 3 0.018
oocyte maturation GO:0001556 4 0.018
response to chemical GO:0042221 320 0.018
regulation of cellular amine metabolic process GO:0033238 0 0.017
internal protein amino acid acetylation GO:0006475 2 0.017
positive regulation of cell cycle GO:0045787 3 0.017
lipid storage GO:0019915 1 0.017
reproductive process GO:0022414 40 0.017
Worm
multi organism cellular process GO:0044764 2 0.017
regulation of gene expression epigenetic GO:0040029 11 0.017
single organism transport GO:0044765 206 0.017
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.017
oxoacid metabolic process GO:0043436 31 0.016
cellular protein metabolic process GO:0044267 129 0.016
cellular response to organic cyclic compound GO:0071407 38 0.016
nuclear transport GO:0051169 4 0.016
atp catabolic process GO:0006200 4 0.016
carboxylic acid metabolic process GO:0019752 22 0.016
cell motility GO:0048870 244 0.016
mitotic nuclear division GO:0007067 18 0.016
Fly
single organism nuclear import GO:1902593 3 0.015
regulation of nucleocytoplasmic transport GO:0046822 2 0.015
multicellular organism reproduction GO:0032504 35 0.015
Worm
protein modification process GO:0036211 100 0.015
organic acid metabolic process GO:0006082 31 0.015
nitrogen compound transport GO:0071705 23 0.015
maternal determination of anterior posterior axis embryo GO:0008358 4 0.014
regulation of erk1 and erk2 cascade GO:0070372 4 0.014
skin development GO:0043588 54 0.014
small molecule metabolic process GO:0044281 77 0.014
phosphorus metabolic process GO:0006793 109 0.014
mrna processing GO:0006397 14 0.014
cellular amino acid metabolic process GO:0006520 7 0.014
cellular process involved in reproduction in multicellular organism GO:0022412 28 0.014
positive regulation of metabolic process GO:0009893 108 0.013
cellular macromolecular complex assembly GO:0034622 24 0.013
mrna metabolic process GO:0016071 20 0.013
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 1 0.013
negative regulation of intracellular transport GO:0032387 3 0.013
positive regulation of glial cell differentiation GO:0045687 1 0.013
meiotic chromosome segregation GO:0045132 3 0.013
peptidyl lysine acetylation GO:0018394 2 0.013
macromolecular complex subunit organization GO:0043933 74 0.013
macromolecular complex assembly GO:0065003 35 0.013
gamete generation GO:0007276 33 0.013
multi organism reproductive process GO:0044703 36 0.013
Worm
regulation of cellular component organization GO:0051128 86 0.013
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.013
transcription elongation from rna polymerase ii promoter GO:0006368 3 0.013
regulation of reproductive process GO:2000241 4 0.013
translational initiation GO:0006413 3 0.012
cellular response to external stimulus GO:0071496 2 0.012
ubiquitin dependent protein catabolic process GO:0006511 3 0.012
spermatid differentiation GO:0048515 2 0.012
positive regulation of catabolic process GO:0009896 4 0.012
lipid metabolic process GO:0006629 52 0.012
cell migration GO:0016477 237 0.012
negative regulation of macromolecule biosynthetic process GO:0010558 48 0.012
regulation of protein localization to nucleus GO:1900180 2 0.012
maintenance of location GO:0051235 4 0.012
cellular response to biotic stimulus GO:0071216 3 0.012
chromatin organization GO:0006325 22 0.012
intracellular mrna localization GO:0008298 1 0.012
response to abiotic stimulus GO:0009628 122 0.012
wnt signaling pathway GO:0016055 80 0.012
internal peptidyl lysine acetylation GO:0018393 2 0.012
intracellular signal transduction GO:0035556 85 0.012
localization of cell GO:0051674 244 0.012
cellular protein catabolic process GO:0044257 4 0.011
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.011
negative regulation of mrna processing GO:0050686 1 0.011
organic cyclic compound biosynthetic process GO:1901362 223 0.011
regulation of protein complex assembly GO:0043254 3 0.011
positive regulation of transport GO:0051050 2 0.011
response to alkaloid GO:0043279 2 0.011
negative regulation of rna biosynthetic process GO:1902679 45 0.011
neuron differentiation GO:0030182 353 0.011
interspecies interaction between organisms GO:0044419 4 0.011
single organism reproductive process GO:0044702 40 0.011
regulation of organelle assembly GO:1902115 4 0.011
sexual reproduction GO:0019953 36 0.011
regulation of protein transport GO:0051223 3 0.011
regulation of molecular function GO:0065009 70 0.011
embryo development ending in birth or egg hatching GO:0009792 271 0.011
negative regulation of nucleic acid templated transcription GO:1903507 45 0.011
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.011
regulation of growth GO:0040008 42 0.011
regulation of cellular protein metabolic process GO:0032268 52 0.011
response to heat GO:0009408 6 0.011
germ cell development GO:0007281 22 0.011
protein import into nucleus GO:0006606 3 0.011
establishment of localization in cell GO:0051649 77 0.011
cell proliferation GO:0008283 80 0.011
regulation of cellular protein catabolic process GO:1903362 1 0.011
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.010
canonical wnt signaling pathway GO:0060070 48 0.010
striated muscle cell development GO:0055002 108 0.010
cell part morphogenesis GO:0032990 246 0.010
regulation of signal transduction GO:0009966 225 0.010
proteasomal protein catabolic process GO:0010498 2 0.010
regulation of heart growth GO:0060420 2 0.010
cellular protein modification process GO:0006464 100 0.010
phagocytosis engulfment GO:0006911 1 0.010
mitotic cell cycle process GO:1903047 48 0.010
Fly
positive regulation of dna metabolic process GO:0051054 1 0.010
cellular response to extracellular stimulus GO:0031668 2 0.010
mrna splicing via spliceosome GO:0000398 10 0.010
regulation of biosynthetic process GO:0009889 250 0.010
protein import GO:0017038 3 0.010
positive regulation of rna metabolic process GO:0051254 59 0.010
positive regulation of small gtpase mediated signal transduction GO:0051057 1 0.010

snrnp40 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org