Danio rerio

0 known processes

sc:d805

sc:d805

sc:d805 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.149
digestive tract development GO:0048565 265 0.076
regionalization GO:0003002 274 0.072
aging GO:0007568 2 0.062
cellular biosynthetic process GO:0044249 286 0.060
maintenance of location GO:0051235 4 0.056
negative regulation of cellular process GO:0048523 283 0.055
regulation of metabolic process GO:0019222 359 0.054
cognition GO:0050890 1 0.053
phagocytosis GO:0006909 3 0.052
stem cell proliferation GO:0072089 4 0.051
regulation of synapse organization GO:0050807 3 0.051
vasculature development GO:0001944 278 0.049
regulation of multicellular organismal process GO:0051239 277 0.049
positive regulation of cellular component biogenesis GO:0044089 3 0.048
multicellular organism growth GO:0035264 4 0.048
blood vessel development GO:0001568 246 0.048
regulation of cellular metabolic process GO:0031323 320 0.048
cellular component assembly GO:0022607 170 0.047
biosynthetic process GO:0009058 294 0.047
signal transduction GO:0007165 455 0.047
heterocycle metabolic process GO:0046483 290 0.047
cellular component assembly involved in morphogenesis GO:0010927 107 0.046
cell projection organization GO:0030030 284 0.046
cellular component movement GO:0006928 335 0.045
negative regulation of biological process GO:0048519 304 0.045
cellular component biogenesis GO:0044085 178 0.044
regulation of developmental process GO:0050793 247 0.043
muscle cell differentiation GO:0042692 139 0.043
heart development GO:0007507 313 0.043
organic substance biosynthetic process GO:1901576 289 0.043
ameboidal type cell migration GO:0001667 143 0.042
regulation of multicellular organismal development GO:2000026 223 0.042
cellular macromolecule metabolic process GO:0044260 391 0.042
positive regulation of transport GO:0051050 2 0.042
blood vessel morphogenesis GO:0048514 216 0.041
regulation of biological quality GO:0065008 263 0.040
muscle structure development GO:0061061 196 0.040
gastrulation GO:0007369 208 0.040
cell morphogenesis GO:0000902 289 0.040
regulation of protein complex assembly GO:0043254 3 0.040
angiogenesis GO:0001525 158 0.039
nitrogen compound metabolic process GO:0006807 319 0.039
regulation of synapse assembly GO:0051963 3 0.039
lipid storage GO:0019915 1 0.039
neuron differentiation GO:0030182 353 0.039
stem cell maintenance GO:0019827 4 0.039
cell substrate adhesion GO:0031589 4 0.039
regulation of multicellular organism growth GO:0040014 4 0.038
regulation of epithelial cell proliferation GO:0050678 3 0.038
embryonic organ development GO:0048568 381 0.037
cell surface receptor signaling pathway GO:0007166 325 0.036
morphogenesis of an epithelium GO:0002009 333 0.036
developmental growth GO:0048589 166 0.035
actin polymerization or depolymerization GO:0008154 2 0.035
cellular nitrogen compound metabolic process GO:0034641 290 0.035
regulation of cell differentiation GO:0045595 142 0.035
regulation of signaling GO:0023051 235 0.034
positive regulation of biological process GO:0048518 253 0.034
anterior posterior pattern specification GO:0009952 152 0.034
regulation of macromolecule metabolic process GO:0060255 317 0.033
cellular component morphogenesis GO:0032989 336 0.033
locomotion GO:0040011 313 0.032
negative regulation of response to stimulus GO:0048585 104 0.032
regulation of response to stimulus GO:0048583 269 0.032
positive regulation of cell cycle GO:0045787 3 0.031
negative regulation of signaling GO:0023057 96 0.031
meiotic nuclear division GO:0007126 4 0.031
regulation of signal transduction GO:0009966 225 0.031
tissue remodeling GO:0048771 4 0.030
axon development GO:0061564 166 0.030
digestive system development GO:0055123 289 0.030
neuroblast proliferation GO:0007405 2 0.030
generation of neurons GO:0048699 385 0.030
regulation of cell projection assembly GO:0060491 4 0.029
tube morphogenesis GO:0035239 349 0.029
regulation of establishment of protein localization GO:0070201 4 0.029
cell morphogenesis involved in differentiation GO:0000904 195 0.029
growth GO:0040007 174 0.029
organelle organization GO:0006996 227 0.029
cytoskeleton organization GO:0007010 96 0.029
tissue regeneration GO:0042246 74 0.029
nuclear transport GO:0051169 4 0.028
response to external stimulus GO:0009605 264 0.028
negative regulation of signal transduction GO:0009968 94 0.028
regulation of cell communication GO:0010646 232 0.028
negative regulation of cell communication GO:0010648 96 0.028
wound healing GO:0042060 90 0.028
cell part morphogenesis GO:0032990 246 0.027
cellular amine metabolic process GO:0044106 2 0.027
synaptic growth at neuromuscular junction GO:0051124 2 0.027
regulation of primary metabolic process GO:0080090 311 0.027
regulation of nitrogen compound metabolic process GO:0051171 251 0.027
transport GO:0006810 220 0.027
sensory organ development GO:0007423 393 0.026
protein metabolic process GO:0019538 183 0.026
organic cyclic compound metabolic process GO:1901360 301 0.026
central nervous system development GO:0007417 387 0.026
aromatic compound biosynthetic process GO:0019438 217 0.025
immune system development GO:0002520 191 0.025
regulation of anatomical structure morphogenesis GO:0022603 130 0.025
regulation of protein polymerization GO:0032271 2 0.025
regulation of cytokine production GO:0001817 3 0.025
establishment of localization GO:0051234 244 0.025
establishment of protein localization to organelle GO:0072594 4 0.025
cellular aromatic compound metabolic process GO:0006725 295 0.025
digestive tract morphogenesis GO:0048546 231 0.025
cell projection morphogenesis GO:0048858 244 0.025
regulation of muscle contraction GO:0006937 3 0.025
negative regulation of synapse assembly GO:0051964 2 0.024
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.024
nucleobase containing compound metabolic process GO:0006139 274 0.024
cell cycle g1 s phase transition GO:0044843 1 0.024
nucleic acid metabolic process GO:0090304 244 0.024
actin cytoskeleton organization GO:0030036 63 0.024
response to stress GO:0006950 263 0.024
actin filament polymerization GO:0030041 2 0.024
protein localization to nucleus GO:0034504 3 0.024
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.024
nucleocytoplasmic transport GO:0006913 4 0.023
cellular nitrogen compound biosynthetic process GO:0044271 218 0.023
enzyme linked receptor protein signaling pathway GO:0007167 106 0.023
neuron development GO:0048666 262 0.023
response to abiotic stimulus GO:0009628 122 0.023
system process GO:0003008 185 0.023
organic cyclic compound biosynthetic process GO:1901362 223 0.023
positive regulation of cellular process GO:0048522 201 0.023
response to organic substance GO:0010033 153 0.023
stem cell differentiation GO:0048863 117 0.023
regulation of neural precursor cell proliferation GO:2000177 3 0.023
regulation of cell shape GO:0008360 1 0.023
dorsal ventral pattern formation GO:0009953 125 0.023
single organism localization GO:1902578 225 0.023
striated muscle cell differentiation GO:0051146 129 0.023
striated muscle cell development GO:0055002 108 0.023
convergent extension GO:0060026 118 0.023
amine metabolic process GO:0009308 2 0.023
muscle tissue development GO:0060537 110 0.022
cellular response to external stimulus GO:0071496 2 0.022
macromolecule biosynthetic process GO:0009059 227 0.022
cell migration GO:0016477 237 0.022
regulation of cytoplasmic transport GO:1903649 4 0.022
actin filament based process GO:0030029 64 0.022
single organism organelle organization GO:1902589 199 0.022
positive regulation of protein complex assembly GO:0031334 2 0.022
heart contraction GO:0060047 71 0.022
proteasomal protein catabolic process GO:0010498 2 0.021
regulation of macromolecule biosynthetic process GO:0010556 225 0.021
adult behavior GO:0030534 2 0.021
neuron projection morphogenesis GO:0048812 161 0.021
gene expression GO:0010467 252 0.021
muscle cell development GO:0055001 115 0.021
membrane invagination GO:0010324 1 0.021
organonitrogen compound metabolic process GO:1901564 74 0.021
cartilage development GO:0051216 96 0.021
cell motility GO:0048870 244 0.021
single organism nuclear import GO:1902593 3 0.021
regeneration GO:0031099 91 0.021
regulation of cellular biosynthetic process GO:0031326 245 0.021
modification dependent protein catabolic process GO:0019941 3 0.021
single organism metabolic process GO:0044710 217 0.021
regulation of biosynthetic process GO:0009889 250 0.021
neuron projection development GO:0031175 180 0.020
phagocytosis engulfment GO:0006911 1 0.020
organelle assembly GO:0070925 110 0.020
cellular amino acid metabolic process GO:0006520 7 0.020
cellular component disassembly GO:0022411 1 0.020
cellular response to extracellular stimulus GO:0031668 2 0.020
actomyosin structure organization GO:0031032 53 0.020
regulation of reproductive process GO:2000241 4 0.020
protein complex disassembly GO:0043241 1 0.020
rna biosynthetic process GO:0032774 181 0.020
taxis GO:0042330 109 0.020
protein import GO:0017038 3 0.020
cellular protein metabolic process GO:0044267 129 0.020
regulation of binding GO:0051098 3 0.019
negative regulation of multicellular organismal process GO:0051241 69 0.019
rna metabolic process GO:0016070 219 0.019
regulation of cellular amine metabolic process GO:0033238 0 0.019
positive regulation of cell adhesion GO:0045785 1 0.019
cell matrix adhesion GO:0007160 4 0.019
protein polymerization GO:0051258 4 0.019
single organism transport GO:0044765 206 0.019
connective tissue development GO:0061448 99 0.019
germ line stem cell maintenance GO:0030718 2 0.019
positive regulation of cytoskeleton organization GO:0051495 3 0.019
regulation of cellular amino acid metabolic process GO:0006521 0 0.019
regulation of protein transport GO:0051223 3 0.019
organic acid catabolic process GO:0016054 3 0.019
phosphate containing compound metabolic process GO:0006796 108 0.019
regulation of gene expression GO:0010468 265 0.019
embryo development ending in birth or egg hatching GO:0009792 271 0.019
apoptotic process GO:0006915 116 0.019
response to chemical GO:0042221 320 0.018
muscle organ development GO:0007517 101 0.018
positive regulation of cytokine production GO:0001819 2 0.018
adherens junction organization GO:0034332 4 0.018
chemosensory behavior GO:0007635 1 0.018
circulatory system process GO:0003013 87 0.018
spermatid development GO:0007286 2 0.018
carboxylic acid metabolic process GO:0019752 22 0.018
chordate embryonic development GO:0043009 271 0.018
cellular response to chemical stimulus GO:0070887 157 0.018
positive regulation of secretion by cell GO:1903532 1 0.018
modification dependent macromolecule catabolic process GO:0043632 3 0.018
regulation of cellular ketone metabolic process GO:0010565 7 0.018
homeostatic process GO:0042592 142 0.018
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.018
localization of cell GO:0051674 244 0.018
protein localization to plasma membrane GO:0072659 1 0.018
epithelial cell differentiation GO:0030855 116 0.018
cellular protein catabolic process GO:0044257 4 0.018
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.018
organic acid metabolic process GO:0006082 31 0.017
eye development GO:0001654 277 0.017
post embryonic organ development GO:0048569 4 0.017
regulation of meiotic cell cycle GO:0051445 1 0.017
spermatid differentiation GO:0048515 2 0.017
skeletal system development GO:0001501 181 0.017
determination of left right symmetry GO:0007368 179 0.017
striated muscle tissue development GO:0014706 110 0.017
camera type eye development GO:0043010 222 0.017
multi organism process GO:0051704 134 0.017
embryonic skeletal system development GO:0048706 97 0.017
cell fate commitment GO:0045165 99 0.017
stem cell division GO:0017145 1 0.017
protein targeting to nucleus GO:0044744 3 0.016
nuclear import GO:0051170 3 0.016
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.016
embryonic organ morphogenesis GO:0048562 274 0.016
nucleic acid templated transcription GO:0097659 181 0.016
regulation of stem cell proliferation GO:0072091 2 0.016
g1 s transition of mitotic cell cycle GO:0000082 1 0.016
cell death GO:0008219 121 0.016
macromolecular complex disassembly GO:0032984 1 0.016
regulation of nervous system development GO:0051960 90 0.016
protein import into nucleus GO:0006606 3 0.016
oxoacid metabolic process GO:0043436 31 0.016
regulation of cellular component organization GO:0051128 86 0.016
cellular macromolecule biosynthetic process GO:0034645 224 0.016
locomotor rhythm GO:0045475 3 0.016
protein homooligomerization GO:0051260 3 0.016
mitochondrion organization GO:0007005 4 0.016
positive regulation of catabolic process GO:0009896 4 0.015
negative regulation of protein phosphorylation GO:0001933 4 0.015
embryonic pattern specification GO:0009880 44 0.015
hemopoiesis GO:0030097 183 0.015
cellular response to molecule of bacterial origin GO:0071219 3 0.015
neurological system process GO:0050877 62 0.015
blood circulation GO:0008015 87 0.015
response to nutrient GO:0007584 3 0.015
negative regulation of neural precursor cell proliferation GO:2000178 1 0.015
heart process GO:0003015 71 0.015
glial cell migration GO:0008347 3 0.015
cellular ketone metabolic process GO:0042180 11 0.015
compound eye development GO:0048749 2 0.015
regulation of rna metabolic process GO:0051252 224 0.015
protein secretion GO:0009306 1 0.015
positive regulation of blood circulation GO:1903524 2 0.015
specification of symmetry GO:0009799 204 0.015
heterocycle biosynthetic process GO:0018130 215 0.015
positive regulation of muscle cell differentiation GO:0051149 1 0.015
transmembrane transport GO:0055085 120 0.015
fin regeneration GO:0031101 51 0.015
response to corticosteroid GO:0031960 1 0.015
regulation of cell substrate adhesion GO:0010810 1 0.015
negative regulation of catabolic process GO:0009895 3 0.015
regulation of rho protein signal transduction GO:0035023 2 0.014
response to drug GO:0042493 3 0.014
gtp catabolic process GO:0006184 2 0.014
death GO:0016265 121 0.014
rho protein signal transduction GO:0007266 5 0.014
ribonucleoside monophosphate catabolic process GO:0009158 4 0.014
mesoderm development GO:0007498 88 0.014
regulation of nucleocytoplasmic transport GO:0046822 2 0.014
establishment of protein localization to plasma membrane GO:0090002 1 0.014
gastrulation with mouth forming second GO:0001702 44 0.014
programmed cell death GO:0012501 119 0.014
lateral inhibition GO:0046331 1 0.014
autophagy GO:0006914 4 0.014
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.014
membrane lipid biosynthetic process GO:0046467 2 0.014
transcription from rna polymerase ii promoter GO:0006366 80 0.014
cellular response to nutrient levels GO:0031669 2 0.014
response to wounding GO:0009611 116 0.014
membrane fusion GO:0061025 2 0.014
gland development GO:0048732 143 0.014
cellular response to organic substance GO:0071310 105 0.014
regulation of purine nucleotide catabolic process GO:0033121 2 0.014
regulation of cell development GO:0060284 100 0.014
cell migration involved in gastrulation GO:0042074 79 0.014
axonogenesis GO:0007409 152 0.014
immune system process GO:0002376 241 0.014
regulation of metal ion transport GO:0010959 4 0.013
lipid homeostasis GO:0055088 3 0.013
hepaticobiliary system development GO:0061008 98 0.013
positive regulation of cellular amine metabolic process GO:0033240 0 0.013
neuronal action potential GO:0019228 18 0.013
regulation of blood vessel size GO:0050880 2 0.013
response to vitamin GO:0033273 3 0.013
brain development GO:0007420 293 0.013
guanosine containing compound catabolic process GO:1901069 2 0.013
positive regulation of peptidyl tyrosine phosphorylation GO:0050731 1 0.013
carboxylic acid catabolic process GO:0046395 3 0.013
nucleic acid transport GO:0050657 2 0.013
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.013
regulation of transcription dna templated GO:0006355 213 0.013
macromolecular complex subunit organization GO:0043933 74 0.013
erk1 and erk2 cascade GO:0070371 4 0.013
cell cycle arrest GO:0007050 1 0.013
cellular response to biotic stimulus GO:0071216 3 0.013
cilium morphogenesis GO:0060271 85 0.013
macromolecule modification GO:0043412 111 0.013
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.013
regulation of protein localization to nucleus GO:1900180 2 0.013
determination of bilateral symmetry GO:0009855 204 0.013
protein modification process GO:0036211 100 0.013
single organism membrane fusion GO:0044801 2 0.013
positive regulation of cell activation GO:0050867 1 0.012
somite development GO:0061053 96 0.012
regulation of nucleotide catabolic process GO:0030811 2 0.012
negative regulation of epithelial cell proliferation GO:0050680 1 0.012
small molecule metabolic process GO:0044281 77 0.012
negative regulation of sequestering of calcium ion GO:0051283 4 0.012
peptidyl serine phosphorylation GO:0018105 1 0.012
nucleobase containing compound biosynthetic process GO:0034654 205 0.012
response to glucocorticoid GO:0051384 1 0.012
ear development GO:0043583 127 0.012
positive regulation of erk1 and erk2 cascade GO:0070374 2 0.012
apical junction assembly GO:0043297 1 0.012
cellular response to starvation GO:0009267 1 0.012
response to external biotic stimulus GO:0043207 97 0.012
peptidyl threonine modification GO:0018210 1 0.012
response to biotic stimulus GO:0009607 97 0.012
regulation of cell activation GO:0050865 1 0.012
sensory perception of chemical stimulus GO:0007606 3 0.012
ubiquitin dependent protein catabolic process GO:0006511 3 0.012
regulation of phosphate metabolic process GO:0019220 43 0.012
regulation of intracellular protein transport GO:0033157 3 0.012
i kappab kinase nf kappab signaling GO:0007249 4 0.012
regulation of tube size GO:0035150 2 0.012
segmentation GO:0035282 97 0.012
positive regulation of secretion GO:0051047 1 0.012
intracellular signal transduction GO:0035556 85 0.012
ion homeostasis GO:0050801 41 0.012
gtp metabolic process GO:0046039 4 0.012
rna localization GO:0006403 4 0.012
regulation of dendrite development GO:0050773 3 0.012
negative regulation of cellular metabolic process GO:0031324 77 0.012
response to monosaccharide GO:0034284 3 0.012
guanosine containing compound metabolic process GO:1901068 4 0.012
skeletal system morphogenesis GO:0048705 102 0.012
rhombomere 5 development GO:0021571 4 0.012
regulation of neurogenesis GO:0050767 87 0.012
negative regulation of defense response GO:0031348 2 0.012
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.012
regulation of protein binding GO:0043393 3 0.012
heart morphogenesis GO:0003007 156 0.012
phosphorus metabolic process GO:0006793 109 0.012
regulation of nucleoside metabolic process GO:0009118 2 0.012
cellular carbohydrate metabolic process GO:0044262 4 0.012
endoderm development GO:0007492 49 0.012
cardiac muscle tissue development GO:0048738 48 0.011
regulation of i kappab kinase nf kappab signaling GO:0043122 4 0.011
skeletal muscle organ development GO:0060538 78 0.011
cytosolic calcium ion transport GO:0060401 3 0.011
dicarboxylic acid metabolic process GO:0043648 1 0.011
regulation of protein targeting GO:1903533 2 0.011
actin filament based movement GO:0030048 1 0.011
regulation of nucleic acid templated transcription GO:1903506 213 0.011
interspecies interaction between organisms GO:0044419 4 0.011
sequestering of metal ion GO:0051238 3 0.011
endosomal transport GO:0016197 2 0.011
negative regulation of macromolecule metabolic process GO:0010605 76 0.011
cell proliferation GO:0008283 80 0.011
positive regulation of map kinase activity GO:0043406 3 0.011
inner ear development GO:0048839 126 0.011
positive regulation of lipid metabolic process GO:0045834 1 0.011
cellular response to lipopolysaccharide GO:0071222 3 0.011
convergent extension involved in gastrulation GO:0060027 71 0.011
negative regulation of protein kinase activity GO:0006469 4 0.011
epithelial tube morphogenesis GO:0060562 148 0.011
response to carbohydrate GO:0009743 3 0.011
positive regulation of immune effector process GO:0002699 3 0.011
regulation of protein complex disassembly GO:0043244 1 0.011
regulation of gtpase activity GO:0043087 2 0.011
regulation of programmed cell death GO:0043067 101 0.011
regulation of gtp catabolic process GO:0033124 2 0.011
carbohydrate biosynthetic process GO:0016051 1 0.011
embryonic heart tube development GO:0035050 133 0.011
negative regulation of mapk cascade GO:0043409 4 0.011
regulation of localization GO:0032879 104 0.011
negative regulation of translation GO:0017148 1 0.011
sequestering of calcium ion GO:0051208 3 0.011
stem cell development GO:0048864 82 0.011
regulation of stem cell differentiation GO:2000736 4 0.011
head development GO:0060322 303 0.011
cellular response to endogenous stimulus GO:0071495 68 0.011
meiotic cell cycle process GO:1903046 3 0.011
cellular localization GO:0051641 97 0.011
regulation of calcium ion transport GO:0051924 2 0.011
regulation of apoptotic process GO:0042981 98 0.011
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.011
regulation of circadian rhythm GO:0042752 4 0.011
positive regulation of cellular catabolic process GO:0031331 3 0.011
purine nucleoside monophosphate catabolic process GO:0009128 4 0.011
small molecule catabolic process GO:0044282 3 0.011
cell projection assembly GO:0030031 64 0.011
wnt signaling pathway GO:0016055 80 0.011
neuron projection guidance GO:0097485 86 0.011
cellular response to oxygen levels GO:0071453 1 0.011
cortical cytoskeleton organization GO:0030865 1 0.011
nucleobase containing compound transport GO:0015931 2 0.011
lamellipodium organization GO:0097581 1 0.011
cytoplasm organization GO:0007028 4 0.010
regulation of sequestering of calcium ion GO:0051282 4 0.010
positive regulation of dna metabolic process GO:0051054 1 0.010
hematopoietic or lymphoid organ development GO:0048534 191 0.010
alpha amino acid metabolic process GO:1901605 3 0.010
negative regulation of cytokine production GO:0001818 1 0.010
symbiosis encompassing mutualism through parasitism GO:0044403 4 0.010
tissue migration GO:0090130 37 0.010
carbohydrate homeostasis GO:0033500 1 0.010
chemotaxis GO:0006935 104 0.010
macromolecular complex assembly GO:0065003 35 0.010
neuron neuron synaptic transmission GO:0007270 1 0.010
retina development in camera type eye GO:0060041 146 0.010
mesenchymal cell differentiation GO:0048762 87 0.010
cytokinesis GO:0000910 3 0.010
regulation of cell death GO:0010941 103 0.010

sc:d805 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.050
musculoskeletal system disease DOID:17 0 0.021
nervous system disease DOID:863 0 0.019
disease of metabolism DOID:0014667 0 0.013
cardiovascular system disease DOID:1287 0 0.013
sensory system disease DOID:0050155 0 0.012
eye and adnexa disease DOID:1492 0 0.011