Danio rerio

0 known processes

col6a3

collagen, type VI, alpha 3

(Aliases: wu:fs74g09,wu:fb06e12)

col6a3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
response to amino acid GO:0043200 2 0.183
protein trimerization GO:0070206 4 0.149
embryonic organ development GO:0048568 381 0.139
regulation of cellular metabolic process GO:0031323 320 0.137
response to drug GO:0042493 3 0.126
nucleic acid metabolic process GO:0090304 244 0.123
transcription dna templated GO:0006351 181 0.121
fin development GO:0033333 77 0.115
cellular nitrogen compound biosynthetic process GO:0044271 218 0.106
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.103
tissue remodeling GO:0048771 4 0.092
collagen fibril organization GO:0030199 1 0.091
response to vitamin GO:0033273 3 0.089
nucleobase containing compound metabolic process GO:0006139 274 0.085
ribonucleoside monophosphate catabolic process GO:0009158 4 0.081
nitrogen compound metabolic process GO:0006807 319 0.078
nucleoside monophosphate catabolic process GO:0009125 4 0.074
cellular response to retinoic acid GO:0071300 1 0.073
bleb assembly GO:0032060 1 0.069
regulation of gene expression GO:0010468 265 0.067
multicellular organismal metabolic process GO:0044236 2 0.066
eye morphogenesis GO:0048592 144 0.065
rna metabolic process GO:0016070 219 0.062
response to reactive oxygen species GO:0000302 5 0.061
regulation of rna metabolic process GO:0051252 224 0.059
response to nutrient GO:0007584 3 0.059
meiotic nuclear division GO:0007126 4 0.056
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.055
protein heterooligomerization GO:0051291 1 0.052
cell surface receptor signaling pathway GO:0007166 325 0.051
heterocycle metabolic process GO:0046483 290 0.051
notochord development GO:0030903 54 0.050
response to chemical GO:0042221 320 0.049
cellular macromolecule biosynthetic process GO:0034645 224 0.048
regulation of cellular biosynthetic process GO:0031326 245 0.047
protein localization to nucleus GO:0034504 3 0.046
myelin assembly GO:0032288 1 0.046
macromolecule biosynthetic process GO:0009059 227 0.045
regulation of multicellular organismal process GO:0051239 277 0.045
collagen metabolic process GO:0032963 2 0.044
cell morphogenesis GO:0000902 289 0.044
regulation of cytokine production GO:0001817 3 0.044
regulation of epithelial cell proliferation GO:0050678 3 0.044
cellular aromatic compound metabolic process GO:0006725 295 0.043
regulation of blood pressure GO:0008217 1 0.042
regulation of nitrogen compound metabolic process GO:0051171 251 0.042
aromatic compound biosynthetic process GO:0019438 217 0.042
extracellular matrix organization GO:0030198 27 0.042
cartilage development GO:0051216 96 0.041
regulation of primary metabolic process GO:0080090 311 0.040
response to hexose GO:0009746 3 0.039
positive regulation of cytokine production GO:0001819 2 0.039
biosynthetic process GO:0009058 294 0.039
nucleic acid templated transcription GO:0097659 181 0.038
convergent extension GO:0060026 118 0.036
atp catabolic process GO:0006200 4 0.035
regulation of transcription dna templated GO:0006355 213 0.035
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.034
multicellular organismal macromolecule metabolic process GO:0044259 2 0.034
collagen biosynthetic process GO:0032964 2 0.033
cell substrate adhesion GO:0031589 4 0.033
transport GO:0006810 220 0.032
skeletal muscle organ development GO:0060538 78 0.032
skeletal system development GO:0001501 181 0.032
organic cyclic compound biosynthetic process GO:1901362 223 0.032
response to glucose GO:0009749 3 0.031
response to inorganic substance GO:0010035 38 0.031
cellular response to external stimulus GO:0071496 2 0.031
cellular response to chemical stimulus GO:0070887 157 0.031
sensory organ development GO:0007423 393 0.031
purine nucleoside monophosphate catabolic process GO:0009128 4 0.030
regulation of macromolecule biosynthetic process GO:0010556 225 0.030
zymogen activation GO:0031638 3 0.029
appendage morphogenesis GO:0035107 56 0.029
mesenchymal cell differentiation GO:0048762 87 0.029
extracellular structure organization GO:0043062 27 0.029
fin morphogenesis GO:0033334 53 0.028
cell motility GO:0048870 244 0.028
vasculature development GO:0001944 278 0.028
embryo development ending in birth or egg hatching GO:0009792 271 0.028
response to topologically incorrect protein GO:0035966 2 0.028
regulation of cell substrate adhesion GO:0010810 1 0.028
heterocycle biosynthetic process GO:0018130 215 0.027
response to corticosteroid GO:0031960 1 0.027
positive regulation of peptidyl tyrosine phosphorylation GO:0050731 1 0.027
positive regulation of neuron death GO:1901216 1 0.027
trabecula formation GO:0060343 2 0.027
eye development GO:0001654 277 0.027
aging GO:0007568 2 0.027
nucleobase containing compound biosynthetic process GO:0034654 205 0.026
positive regulation of canonical wnt signaling pathway GO:0090263 4 0.026
chordate embryonic development GO:0043009 271 0.026
leukocyte migration GO:0050900 15 0.026
blood vessel development GO:0001568 246 0.026
localization of cell GO:0051674 244 0.026
skeletal system morphogenesis GO:0048705 102 0.025
stem cell differentiation GO:0048863 117 0.025
organic substance biosynthetic process GO:1901576 289 0.025
organic cyclic compound metabolic process GO:1901360 301 0.025
camera type eye morphogenesis GO:0048593 108 0.025
head development GO:0060322 303 0.025
regulation of signaling GO:0023051 235 0.024
response to stress GO:0006950 263 0.024
regulation of cell communication GO:0010646 232 0.024
oxoacid metabolic process GO:0043436 31 0.024
system process GO:0003008 185 0.024
regulation of rna biosynthetic process GO:2001141 213 0.024
cellular nitrogen compound metabolic process GO:0034641 290 0.024
organonitrogen compound metabolic process GO:1901564 74 0.024
response to carbohydrate GO:0009743 3 0.023
regulation of leukocyte migration GO:0002685 8 0.023
connective tissue development GO:0061448 99 0.023
intramembranous ossification GO:0001957 3 0.023
appendage development GO:0048736 80 0.022
camera type eye development GO:0043010 222 0.022
regulation of epithelial to mesenchymal transition GO:0010717 3 0.022
regulation of developmental process GO:0050793 247 0.022
embryonic organ morphogenesis GO:0048562 274 0.022
regulation of biosynthetic process GO:0009889 250 0.022
response to wounding GO:0009611 116 0.021
response to organic substance GO:0010033 153 0.021
morphogenesis of an epithelium GO:0002009 333 0.021
response to hydrogen peroxide GO:0042542 3 0.021
response to hormone GO:0009725 48 0.021
positive regulation of biological process GO:0048518 253 0.021
regulation of nucleic acid templated transcription GO:1903506 213 0.021
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.020
regulation of stem cell differentiation GO:2000736 4 0.020
rna biosynthetic process GO:0032774 181 0.020
nitric oxide metabolic process GO:0046209 2 0.020
immune system process GO:0002376 241 0.019
organic acid metabolic process GO:0006082 31 0.019
multicellular organismal signaling GO:0035637 22 0.019
response to external stimulus GO:0009605 264 0.019
neutrophil migration GO:1990266 10 0.019
regulation of wnt signaling pathway GO:0030111 53 0.019
renal system process involved in regulation of blood volume GO:0001977 1 0.018
gene expression GO:0010467 252 0.018
tissue regeneration GO:0042246 74 0.018
extracellular matrix constituent secretion GO:0070278 3 0.018
chondrocyte development GO:0002063 4 0.017
positive regulation of biosynthetic process GO:0009891 68 0.017
regulation of neutrophil migration GO:1902622 6 0.017
muscle structure development GO:0061061 196 0.017
cell part morphogenesis GO:0032990 246 0.017
single organism metabolic process GO:0044710 217 0.017
regulation of metabolic process GO:0019222 359 0.017
positive regulation of leukocyte migration GO:0002687 2 0.016
cellular macromolecule metabolic process GO:0044260 391 0.016
central nervous system development GO:0007417 387 0.016
protein homooligomerization GO:0051260 3 0.016
developmental growth GO:0048589 166 0.016
cellular response to extracellular stimulus GO:0031668 2 0.016
regulation of anatomical structure morphogenesis GO:0022603 130 0.016
response to fibroblast growth factor GO:0071774 22 0.016
cellular protein catabolic process GO:0044257 4 0.016
sensory organ morphogenesis GO:0090596 200 0.016
cellular response to growth factor stimulus GO:0071363 39 0.016
small molecule metabolic process GO:0044281 77 0.016
angiogenesis GO:0001525 158 0.016
myeloid leukocyte migration GO:0097529 12 0.016
regulation of extrinsic apoptotic signaling pathway GO:2001236 3 0.016
regeneration GO:0031099 91 0.016
cellular response to organic substance GO:0071310 105 0.015
regulation of protein catabolic process GO:0042176 1 0.015
response to monosaccharide GO:0034284 3 0.015
cellular component assembly GO:0022607 170 0.015
regulation of signal transduction GO:0009966 225 0.015
proteoglycan metabolic process GO:0006029 14 0.015
regulation of reactive oxygen species metabolic process GO:2000377 2 0.015
positive regulation of catabolic process GO:0009896 4 0.015
embryonic heart tube morphogenesis GO:0003143 108 0.015
digestive system development GO:0055123 289 0.015
positive regulation of cellular component biogenesis GO:0044089 3 0.015
action potential GO:0001508 19 0.014
blood vessel morphogenesis GO:0048514 216 0.014
fin regeneration GO:0031101 51 0.014
mesenchyme development GO:0060485 127 0.014
signal transduction GO:0007165 455 0.014
response to oxygen containing compound GO:1901700 55 0.014
nuclear import GO:0051170 3 0.014
positive regulation of gene expression GO:0010628 71 0.014
cellular response to fibroblast growth factor stimulus GO:0044344 22 0.014
regulation of cellular protein catabolic process GO:1903362 1 0.014
cell matrix adhesion GO:0007160 4 0.014
canonical wnt signaling pathway GO:0060070 48 0.014
neuron development GO:0048666 262 0.014
phospholipase c activating g protein coupled receptor signaling pathway GO:0007200 2 0.014
extrinsic apoptotic signaling pathway GO:0097191 3 0.013
nitric oxide biosynthetic process GO:0006809 2 0.013
convergent extension involved in axis elongation GO:0060028 26 0.013
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.013
response to acid chemical GO:0001101 17 0.013
hematopoietic or lymphoid organ development GO:0048534 191 0.013
regulation of cellular amino acid metabolic process GO:0006521 0 0.013
regulation of multicellular organismal development GO:2000026 223 0.013
protein import GO:0017038 3 0.013
outflow tract morphogenesis GO:0003151 1 0.013
regulation of cell activation GO:0050865 1 0.013
carboxylic acid metabolic process GO:0019752 22 0.013
direct ossification GO:0036072 3 0.013
cellular component morphogenesis GO:0032989 336 0.013
peptide metabolic process GO:0006518 1 0.013
cellular response to endogenous stimulus GO:0071495 68 0.013
protein metabolic process GO:0019538 183 0.013
neuronal action potential GO:0019228 18 0.013
cellular response to organic cyclic compound GO:0071407 38 0.013
renal filtration GO:0097205 10 0.013
muscle organ development GO:0007517 101 0.012
regulation of canonical wnt signaling pathway GO:0060828 34 0.012
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.012
cartilage morphogenesis GO:0060536 13 0.012
mitochondrion organization GO:0007005 4 0.012
growth GO:0040007 174 0.012
amine metabolic process GO:0009308 2 0.012
positive regulation of response to stimulus GO:0048584 80 0.012
carbohydrate biosynthetic process GO:0016051 1 0.012
sensory perception GO:0007600 39 0.012
epithelial tube morphogenesis GO:0060562 148 0.011
blood circulation GO:0008015 87 0.011
regulation of localization GO:0032879 104 0.011
embryonic eye morphogenesis GO:0048048 30 0.011
extrinsic apoptotic signaling pathway via death domain receptors GO:0008625 1 0.011
trabecula morphogenesis GO:0061383 2 0.011
neurological system process GO:0050877 62 0.011
cell death GO:0008219 121 0.011
regulation of cellular amine metabolic process GO:0033238 0 0.011
negative regulation of map kinase activity GO:0043407 2 0.011
response to endogenous stimulus GO:0009719 83 0.011
embryonic camera type eye development GO:0031076 29 0.011
phagocytosis GO:0006909 3 0.011
negative regulation of developmental process GO:0051093 65 0.011
cell adhesion mediated by integrin GO:0033627 1 0.011
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.011
phosphorus metabolic process GO:0006793 109 0.011
skeletal muscle tissue development GO:0007519 67 0.011
cell projection morphogenesis GO:0048858 244 0.011
positive regulation of leukocyte chemotaxis GO:0002690 1 0.010
regulation of systemic arterial blood pressure GO:0003073 1 0.010
neuromuscular synaptic transmission GO:0007274 2 0.010
face morphogenesis GO:0060325 6 0.010
cellular amine metabolic process GO:0044106 2 0.010
cellular amino acid metabolic process GO:0006520 7 0.010
regulation of cellular ketone metabolic process GO:0010565 7 0.010
chronic inflammatory response GO:0002544 1 0.010
positive regulation of translation GO:0045727 1 0.010
cellular biosynthetic process GO:0044249 286 0.010
digestive tract development GO:0048565 265 0.010
developmental growth involved in morphogenesis GO:0060560 86 0.010
regulation of cell migration GO:0030334 40 0.010

col6a3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
charcot marie tooth disease type 4 DOID:0050541 0 0.224
neuromuscular disease DOID:440 0 0.224
disease of anatomical entity DOID:7 0 0.224
charcot marie tooth disease DOID:10595 0 0.224
nervous system disease DOID:863 0 0.224
neuropathy DOID:870 0 0.224
musculoskeletal system disease DOID:17 0 0.049
connective tissue disease DOID:65 0 0.029
osteochondrodysplasia DOID:2256 0 0.027
osteogenesis imperfecta DOID:12347 0 0.027
bone development disease DOID:0080006 0 0.027
bone disease DOID:0080001 0 0.027
bone remodeling disease DOID:0080005 0 0.017
cancer DOID:162 0 0.012
disease of cellular proliferation DOID:14566 0 0.012
organ system cancer DOID:0050686 0 0.012