Danio rerio

0 known processes

col6a6

collagen, type VI, alpha 6

(Aliases: si:dkey-202m9.3,im:7152043)

col6a6 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.249
actin polymerization or depolymerization GO:0008154 2 0.146
positive regulation of protein polymerization GO:0032273 2 0.135
protein polymerization GO:0051258 4 0.125
embryonic organ development GO:0048568 381 0.121
positive regulation of cellular component biogenesis GO:0044089 3 0.115
eye development GO:0001654 277 0.106
striated muscle tissue development GO:0014706 110 0.101
regulation of cellular amino acid metabolic process GO:0006521 0 0.087
muscle structure development GO:0061061 196 0.082
nuclear transport GO:0051169 4 0.080
regulation of protein polymerization GO:0032271 2 0.078
cellular amine metabolic process GO:0044106 2 0.078
regulation of protein complex assembly GO:0043254 3 0.078
regulation of biological quality GO:0065008 263 0.072
nucleoside monophosphate catabolic process GO:0009125 4 0.072
neuron differentiation GO:0030182 353 0.070
positive regulation of protein complex assembly GO:0031334 2 0.070
generation of neurons GO:0048699 385 0.067
aging GO:0007568 2 0.067
actin filament polymerization GO:0030041 2 0.066
signal transduction GO:0007165 455 0.065
post embryonic organ development GO:0048569 4 0.063
sensory organ development GO:0007423 393 0.062
maintenance of location GO:0051235 4 0.058
brain development GO:0007420 293 0.056
heart development GO:0007507 313 0.056
system process GO:0003008 185 0.055
cell part morphogenesis GO:0032990 246 0.054
atp catabolic process GO:0006200 4 0.054
lateral inhibition GO:0046331 1 0.052
lipid storage GO:0019915 1 0.052
digestive system development GO:0055123 289 0.052
positive regulation of transport GO:0051050 2 0.052
positive regulation of cytoskeleton organization GO:0051495 3 0.052
neuron development GO:0048666 262 0.051
amine metabolic process GO:0009308 2 0.050
protein localization to nucleus GO:0034504 3 0.049
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.047
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.047
cell surface receptor signaling pathway GO:0007166 325 0.047
organonitrogen compound metabolic process GO:1901564 74 0.046
cell projection morphogenesis GO:0048858 244 0.046
tube morphogenesis GO:0035239 349 0.045
cell projection organization GO:0030030 284 0.045
regulation of cellular amine metabolic process GO:0033238 0 0.044
ribonucleoside monophosphate catabolic process GO:0009158 4 0.044
camera type eye development GO:0043010 222 0.044
cellular macromolecule metabolic process GO:0044260 391 0.043
central nervous system development GO:0007417 387 0.043
skeletal system development GO:0001501 181 0.042
establishment of protein localization to organelle GO:0072594 4 0.042
cellular amino acid metabolic process GO:0006520 7 0.042
branching morphogenesis of a nerve GO:0048755 4 0.041
digestive tract development GO:0048565 265 0.041
single organism localization GO:1902578 225 0.041
determination of bilateral symmetry GO:0009855 204 0.040
morphogenesis of an epithelium GO:0002009 333 0.039
cellular ketone metabolic process GO:0042180 11 0.039
cell morphogenesis involved in differentiation GO:0000904 195 0.038
carboxylic acid metabolic process GO:0019752 22 0.038
protein targeting to nucleus GO:0044744 3 0.038
negative regulation of protein phosphorylation GO:0001933 4 0.037
embryonic organ morphogenesis GO:0048562 274 0.037
cellular nitrogen compound metabolic process GO:0034641 290 0.036
heterocycle metabolic process GO:0046483 290 0.036
organic cyclic compound metabolic process GO:1901360 301 0.036
phagocytosis GO:0006909 3 0.035
nuclear import GO:0051170 3 0.035
muscle cell differentiation GO:0042692 139 0.035
regulation of protein transport GO:0051223 3 0.035
regulation of response to stimulus GO:0048583 269 0.034
regulation of multicellular organismal development GO:2000026 223 0.034
regulation of cellular ketone metabolic process GO:0010565 7 0.033
immune system development GO:0002520 191 0.033
adherens junction organization GO:0034332 4 0.033
endosomal transport GO:0016197 2 0.033
muscle organ development GO:0007517 101 0.033
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.032
gastrulation GO:0007369 208 0.032
stem cell division GO:0017145 1 0.032
sensory organ morphogenesis GO:0090596 200 0.032
cell substrate adhesion GO:0031589 4 0.032
regulation of metabolic process GO:0019222 359 0.032
positive regulation of cellular amine metabolic process GO:0033240 0 0.031
regulation of protein targeting GO:1903533 2 0.031
localization of cell GO:0051674 244 0.031
adult behavior GO:0030534 2 0.031
protein import into nucleus GO:0006606 3 0.031
blood vessel development GO:0001568 246 0.030
stem cell proliferation GO:0072089 4 0.030
regulation of macromolecule metabolic process GO:0060255 317 0.030
single organism nuclear import GO:1902593 3 0.030
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.029
single organism cell adhesion GO:0098602 29 0.029
hemopoiesis GO:0030097 183 0.029
meiotic nuclear division GO:0007126 4 0.029
cytokinesis GO:0000910 3 0.029
striated muscle cell differentiation GO:0051146 129 0.029
regulation of establishment of protein localization GO:0070201 4 0.029
compound eye development GO:0048749 2 0.029
negative regulation of nucleocytoplasmic transport GO:0046823 2 0.028
nucleocytoplasmic transport GO:0006913 4 0.028
oxoacid metabolic process GO:0043436 31 0.028
negative regulation of cytoplasmic transport GO:1903650 2 0.028
vasculature development GO:0001944 278 0.028
embryonic heart tube development GO:0035050 133 0.027
synaptic growth at neuromuscular junction GO:0051124 2 0.027
neuron projection development GO:0031175 180 0.027
transport GO:0006810 220 0.027
regulation of protein import into nucleus GO:0042306 2 0.027
regionalization GO:0003002 274 0.027
extracellular structure organization GO:0043062 27 0.026
modification dependent macromolecule catabolic process GO:0043632 3 0.026
heart morphogenesis GO:0003007 156 0.026
determination of left right symmetry GO:0007368 179 0.026
chemosensory behavior GO:0007635 1 0.026
notochord development GO:0030903 54 0.026
angiogenesis GO:0001525 158 0.026
cell adhesion GO:0007155 40 0.025
neuron projection morphogenesis GO:0048812 161 0.025
gtp catabolic process GO:0006184 2 0.025
regulation of multicellular organismal process GO:0051239 277 0.025
cortical cytoskeleton organization GO:0030865 1 0.025
response to stress GO:0006950 263 0.024
regulation of nucleocytoplasmic transport GO:0046822 2 0.024
cellular component morphogenesis GO:0032989 336 0.024
skeletal muscle tissue development GO:0007519 67 0.024
regulation of synapse organization GO:0050807 3 0.024
forebrain development GO:0030900 96 0.024
cellular localization GO:0051641 97 0.024
nucleobase containing compound metabolic process GO:0006139 274 0.024
cellular component biogenesis GO:0044085 178 0.024
positive regulation of cell cycle GO:0045787 3 0.024
response to external stimulus GO:0009605 264 0.024
specification of symmetry GO:0009799 204 0.023
regulation of myotube differentiation GO:0010830 2 0.023
positive regulation of cellular carbohydrate metabolic process GO:0010676 1 0.023
actin filament based process GO:0030029 64 0.023
cellular carbohydrate metabolic process GO:0044262 4 0.023
regulation of cytoplasmic transport GO:1903649 4 0.023
biosynthetic process GO:0009058 294 0.023
negative regulation of multicellular organismal process GO:0051241 69 0.023
organic acid metabolic process GO:0006082 31 0.022
regulation of reproductive process GO:2000241 4 0.022
cell fate commitment GO:0045165 99 0.022
regulation of cell activation GO:0050865 1 0.022
response to nutrient GO:0007584 3 0.022
phagocytosis engulfment GO:0006911 1 0.022
cell morphogenesis GO:0000902 289 0.022
cellular component movement GO:0006928 335 0.022
guanosine containing compound metabolic process GO:1901068 4 0.022
macromolecule biosynthetic process GO:0009059 227 0.022
organic substance biosynthetic process GO:1901576 289 0.022
multicellular organismal response to stress GO:0033555 2 0.022
regulation of nitrogen compound metabolic process GO:0051171 251 0.022
single organism organelle organization GO:1902589 199 0.021
negative regulation of intracellular transport GO:0032387 3 0.021
gene expression GO:0010467 252 0.021
protein localization to plasma membrane GO:0072659 1 0.021
positive regulation of cellular catabolic process GO:0031331 3 0.021
somatic muscle development GO:0007525 4 0.021
regulation of intracellular protein transport GO:0033157 3 0.021
protein import GO:0017038 3 0.021
regulation of cell matrix adhesion GO:0001952 1 0.021
multicellular organism growth GO:0035264 4 0.021
stem cell differentiation GO:0048863 117 0.020
regulation of cellular metabolic process GO:0031323 320 0.020
locomotion GO:0040011 313 0.020
cortical actin cytoskeleton organization GO:0030866 1 0.020
homophilic cell adhesion via plasma membrane adhesion molecules GO:0007156 4 0.020
establishment of localization GO:0051234 244 0.020
peptidyl serine phosphorylation GO:0018105 1 0.020
regulation of locomotion GO:0040012 55 0.020
developmental growth involved in morphogenesis GO:0060560 86 0.020
neuron neuron synaptic transmission GO:0007270 1 0.020
positive regulation of carbohydrate metabolic process GO:0045913 1 0.020
myoblast fusion GO:0007520 10 0.020
regulation of mrna processing GO:0050684 3 0.020
striated muscle cell development GO:0055002 108 0.019
response to wounding GO:0009611 116 0.019
protein metabolic process GO:0019538 183 0.019
negative regulation of protein transport GO:0051224 3 0.019
positive regulation of catabolic process GO:0009896 4 0.019
rna localization GO:0006403 4 0.019
negative regulation of intracellular protein transport GO:0090317 3 0.019
embryonic hemopoiesis GO:0035162 53 0.019
axon development GO:0061564 166 0.019
adherens junction assembly GO:0034333 1 0.019
growth GO:0040007 174 0.019
sensory perception of chemical stimulus GO:0007606 3 0.019
purine nucleoside monophosphate catabolic process GO:0009128 4 0.019
muscle tissue development GO:0060537 110 0.019
protein homooligomerization GO:0051260 3 0.018
regulation of anatomical structure morphogenesis GO:0022603 130 0.018
modification dependent protein catabolic process GO:0019941 3 0.018
mitochondrion organization GO:0007005 4 0.018
actin cytoskeleton organization GO:0030036 63 0.018
single organism transport GO:0044765 206 0.018
axonogenesis GO:0007409 152 0.018
gtp metabolic process GO:0046039 4 0.018
regulation of syncytium formation by plasma membrane fusion GO:0060142 2 0.018
regulation of cellular component size GO:0032535 30 0.018
synaptic target recognition GO:0008039 1 0.018
cellular aromatic compound metabolic process GO:0006725 295 0.018
regulation of developmental process GO:0050793 247 0.018
cellular component assembly GO:0022607 170 0.018
cellular response to extracellular stimulus GO:0031668 2 0.018
negative regulation of protein localization to nucleus GO:1900181 2 0.018
muscle fiber development GO:0048747 52 0.018
regulation of protein localization to nucleus GO:1900180 2 0.018
glomerulus development GO:0032835 27 0.017
gland development GO:0048732 143 0.017
central nervous system neuron development GO:0021954 29 0.017
cellular protein metabolic process GO:0044267 129 0.017
regulation of cell substrate adhesion GO:0010810 1 0.017
embryonic heart tube morphogenesis GO:0003143 108 0.017
rna metabolic process GO:0016070 219 0.017
regulation of multicellular organism growth GO:0040014 4 0.017
defense response to fungus GO:0050832 2 0.017
regulation of cellular carbohydrate metabolic process GO:0010675 4 0.017
wound healing GO:0042060 90 0.017
regulation of gene expression GO:0010468 265 0.017
maternal determination of anterior posterior axis embryo GO:0008358 4 0.017
epithelial cell differentiation GO:0030855 116 0.016
neuron recognition GO:0008038 18 0.016
immune system process GO:0002376 241 0.016
regulation of cytokine production GO:0001817 3 0.016
membrane invagination GO:0010324 1 0.016
regulation of cell differentiation GO:0045595 142 0.016
regulation of mrna splicing via spliceosome GO:0048024 3 0.016
negative regulation of protein import into nucleus GO:0042308 2 0.016
glucose homeostasis GO:0042593 1 0.016
regulation of carbohydrate metabolic process GO:0006109 4 0.016
establishment of protein localization to plasma membrane GO:0090002 1 0.016
carbohydrate homeostasis GO:0033500 1 0.016
regulation of macromolecule biosynthetic process GO:0010556 225 0.016
cellular nitrogen compound biosynthetic process GO:0044271 218 0.016
proteasomal protein catabolic process GO:0010498 2 0.016
developmental growth GO:0048589 166 0.016
g1 s transition of mitotic cell cycle GO:0000082 1 0.016
exocytosis GO:0006887 1 0.015
regulation of nucleic acid templated transcription GO:1903506 213 0.015
peptidyl serine modification GO:0018209 2 0.015
stem cell maintenance GO:0019827 4 0.015
positive regulation of cellular process GO:0048522 201 0.015
nucleic acid metabolic process GO:0090304 244 0.015
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.015
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.015
carbohydrate biosynthetic process GO:0016051 1 0.015
regulation of synapse assembly GO:0051963 3 0.015
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.015
regulation of blood vessel size GO:0050880 2 0.015
behavior GO:0007610 74 0.015
regulation of gtp catabolic process GO:0033124 2 0.015
response to drug GO:0042493 3 0.015
single organism metabolic process GO:0044710 217 0.015
cellular protein catabolic process GO:0044257 4 0.015
cellular macromolecular complex assembly GO:0034622 24 0.015
anterior posterior pattern specification GO:0009952 152 0.015
negative regulation of biological process GO:0048519 304 0.015
cell motility GO:0048870 244 0.015
organelle organization GO:0006996 227 0.015
myeloid cell differentiation GO:0030099 86 0.015
protein complex assembly GO:0006461 30 0.015
digestive tract morphogenesis GO:0048546 231 0.015
endoplasmic reticulum unfolded protein response GO:0030968 2 0.015
myeloid cell homeostasis GO:0002262 56 0.015
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.015
syncytium formation GO:0006949 12 0.015
cell matrix adhesion GO:0007160 4 0.015
actin filament based movement GO:0030048 1 0.015
aromatic compound biosynthetic process GO:0019438 217 0.014
determination of heart left right asymmetry GO:0061371 117 0.014
regulation of muscle contraction GO:0006937 3 0.014
regulation of cell shape GO:0008360 1 0.014
cognition GO:0050890 1 0.014
smooth muscle contraction GO:0006939 2 0.014
head development GO:0060322 303 0.014
regulation of blood pressure GO:0008217 1 0.014
cellular protein complex assembly GO:0043623 19 0.014
positive regulation of leukocyte chemotaxis GO:0002690 1 0.014
positive regulation of secretion GO:0051047 1 0.014
multi organism process GO:0051704 134 0.014
regulation of primary metabolic process GO:0080090 311 0.014
cellular response to external stimulus GO:0071496 2 0.014
epithelial cell development GO:0002064 42 0.014
regulation of tube size GO:0035150 2 0.014
homeostasis of number of cells GO:0048872 62 0.014
regulation of nucleoside metabolic process GO:0009118 2 0.014
ventricular cardiac muscle tissue development GO:0003229 3 0.014
regulation of meiotic cell cycle GO:0051445 1 0.014
cellular biosynthetic process GO:0044249 286 0.014
regulation of striated muscle contraction GO:0006942 2 0.014
camera type eye morphogenesis GO:0048593 108 0.014
small molecule metabolic process GO:0044281 77 0.014
macromolecular complex subunit organization GO:0043933 74 0.014
regulation of purine nucleotide catabolic process GO:0033121 2 0.014
embryo development ending in birth or egg hatching GO:0009792 271 0.014
syncytium formation by plasma membrane fusion GO:0000768 12 0.014
cellular response to chemical stimulus GO:0070887 157 0.013
pole plasm assembly GO:0007315 4 0.013
g protein coupled receptor signaling pathway GO:0007186 74 0.013
positive regulation of map kinase activity GO:0043406 3 0.013
regulation of organelle organization GO:0033043 29 0.013
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.013
regulation of nucleotide catabolic process GO:0030811 2 0.013
nucleobase containing compound biosynthetic process GO:0034654 205 0.013
glial cell migration GO:0008347 3 0.013
homeostatic process GO:0042592 142 0.013
small molecule catabolic process GO:0044282 3 0.013
retina development in camera type eye GO:0060041 146 0.013
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.013
rna biosynthetic process GO:0032774 181 0.013
renal system development GO:0072001 94 0.013
nitrogen compound metabolic process GO:0006807 319 0.013
ubiquitin dependent protein catabolic process GO:0006511 3 0.013
phosphate containing compound metabolic process GO:0006796 108 0.013
cellular response to topologically incorrect protein GO:0035967 2 0.013
female sex differentiation GO:0046660 4 0.013
response to chemical GO:0042221 320 0.013
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.013
protein dephosphorylation GO:0006470 3 0.012
chemotaxis GO:0006935 104 0.012
embryonic skeletal joint development GO:0072498 3 0.012
peptidyl threonine phosphorylation GO:0018107 1 0.012
neuroblast proliferation GO:0007405 2 0.012
pronephros development GO:0048793 69 0.012
cell cycle g1 s phase transition GO:0044843 1 0.012
extracellular matrix organization GO:0030198 27 0.012
myotube differentiation GO:0014902 45 0.012
cellular response to nutrient levels GO:0031669 2 0.012
enzyme linked receptor protein signaling pathway GO:0007167 106 0.012
spermatid differentiation GO:0048515 2 0.012
cellular protein modification process GO:0006464 100 0.012
intracellular mrna localization GO:0008298 1 0.012
phosphorus metabolic process GO:0006793 109 0.012
single organismal cell cell adhesion GO:0016337 29 0.012
lipid homeostasis GO:0055088 3 0.012
oocyte anterior posterior axis specification GO:0007314 4 0.012
actin mediated cell contraction GO:0070252 1 0.012
membrane fusion GO:0061025 2 0.012
response to ketone GO:1901654 1 0.012
cytoskeleton organization GO:0007010 96 0.012
regulation of gtpase activity GO:0043087 2 0.012
heterophilic cell cell adhesion via plasma membrane cell adhesion molecules GO:0007157 2 0.012
regulation of metal ion transport GO:0010959 4 0.012
hematopoietic or lymphoid organ development GO:0048534 191 0.012
positive regulation of peptidyl tyrosine phosphorylation GO:0050731 1 0.012
nucleobase containing compound transport GO:0015931 2 0.012
transmembrane transport GO:0055085 120 0.012
protein complex biogenesis GO:0070271 30 0.012
spermatid development GO:0007286 2 0.012
regulation of biosynthetic process GO:0009889 250 0.012
regulation of binding GO:0051098 3 0.012
cell death GO:0008219 121 0.012
nuclear migration GO:0007097 3 0.012
dorsal ventral pattern formation GO:0009953 125 0.012
eye morphogenesis GO:0048592 144 0.011
locomotor rhythm GO:0045475 3 0.011
nuclear export GO:0051168 1 0.011
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.011
activation of mapk activity GO:0000187 3 0.011
convergent extension GO:0060026 118 0.011
microtubule based process GO:0007017 60 0.011
developmental programmed cell death GO:0010623 4 0.011
regulation of signal transduction GO:0009966 225 0.011
tissue remodeling GO:0048771 4 0.011
cytoskeleton dependent cytokinesis GO:0061640 3 0.011
heart looping GO:0001947 94 0.011
response to corticosteroid GO:0031960 1 0.011
negative regulation of developmental process GO:0051093 65 0.011
regulation of cellular component organization GO:0051128 86 0.011
macromolecular complex assembly GO:0065003 35 0.011
chordate embryonic development GO:0043009 271 0.011
regulation of cellular protein metabolic process GO:0032268 52 0.011
response to carbohydrate GO:0009743 3 0.011
regulation of heart contraction GO:0008016 32 0.011
transcription from rna polymerase ii promoter GO:0006366 80 0.011
protein targeting to membrane GO:0006612 1 0.011
facial nerve morphogenesis GO:0021610 1 0.011
cellular macromolecule biosynthetic process GO:0034645 224 0.011
lymph vessel morphogenesis GO:0036303 25 0.011
protein complex disassembly GO:0043241 1 0.011
cellular response to organic substance GO:0071310 105 0.011
single organism membrane fusion GO:0044801 2 0.011
heart process GO:0003015 71 0.011
secondary metabolic process GO:0019748 3 0.011
negative regulation of cytokine production GO:0001818 1 0.011
alternative mrna splicing via spliceosome GO:0000380 1 0.011
macromolecule modification GO:0043412 111 0.011
collagen fibril organization GO:0030199 1 0.011
cell migration GO:0016477 237 0.011
skeletal muscle organ development GO:0060538 78 0.011
regulation of anatomical structure size GO:0090066 33 0.011
negative regulation of cell differentiation GO:0045596 46 0.011
segmentation GO:0035282 97 0.011
cellular response to methanol GO:0071405 4 0.011
internal protein amino acid acetylation GO:0006475 2 0.011
nucleic acid templated transcription GO:0097659 181 0.010
meiotic cell cycle process GO:1903046 3 0.010
response to uv GO:0009411 3 0.010
mitotic cell cycle GO:0000278 64 0.010
regulation of rho protein signal transduction GO:0035023 2 0.010
macromolecular complex disassembly GO:0032984 1 0.010
liver development GO:0001889 96 0.010
negative regulation of leukocyte differentiation GO:1902106 1 0.010
regulation of response to nutrient levels GO:0032107 1 0.010
connective tissue development GO:0061448 99 0.010
negative regulation of ras protein signal transduction GO:0046580 1 0.010
cell aging GO:0007569 2 0.010
protein acetylation GO:0006473 2 0.010
embryonic skeletal joint morphogenesis GO:0060272 3 0.010
facial nerve development GO:0021561 3 0.010
myeloid leukocyte migration GO:0097529 12 0.010
epithelial tube morphogenesis GO:0060562 148 0.010
guanosine containing compound catabolic process GO:1901069 2 0.010
b cell activation GO:0042113 2 0.010

col6a6 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.042
musculoskeletal system disease DOID:17 0 0.042
cancer DOID:162 0 0.021
disease of cellular proliferation DOID:14566 0 0.021
organ system cancer DOID:0050686 0 0.021
myopathy DOID:423 0 0.017
muscular disease DOID:0080000 0 0.017
muscle tissue disease DOID:66 0 0.017
nervous system disease DOID:863 0 0.014
bone disease DOID:0080001 0 0.011
connective tissue disease DOID:65 0 0.011