Danio rerio

0 known processes

lim2.3

lens intrinsic membrane protein 2.3

(Aliases: zgc:92719)

lim2.3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
maintenance of location GO:0051235 4 0.060
larval development GO:0002164 2 0.060
aging GO:0007568 2 0.039
multicellular organism growth GO:0035264 4 0.037
phagocytosis GO:0006909 3 0.036
positive regulation of transport GO:0051050 2 0.032
blood vessel development GO:0001568 246 0.032
lipid storage GO:0019915 1 0.031
regulation of multicellular organism growth GO:0040014 4 0.030
amine metabolic process GO:0009308 2 0.028
cellular amine metabolic process GO:0044106 2 0.028
regulation of cellular amine metabolic process GO:0033238 0 0.028
cellular nitrogen compound metabolic process GO:0034641 290 0.026
nitrogen compound metabolic process GO:0006807 319 0.026
positive regulation of cellular component biogenesis GO:0044089 3 0.025
vasculature development GO:0001944 278 0.025
regulation of biological quality GO:0065008 263 0.024
embryonic organ development GO:0048568 381 0.024
regulation of cellular amino acid metabolic process GO:0006521 0 0.024
cellular macromolecule metabolic process GO:0044260 391 0.024
response to chemical GO:0042221 320 0.023
adult behavior GO:0030534 2 0.023
signal transduction GO:0007165 455 0.023
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.023
positive regulation of cellular catabolic process GO:0031331 3 0.023
guanosine containing compound metabolic process GO:1901068 4 0.023
regulation of cellular ketone metabolic process GO:0010565 7 0.023
organic cyclic compound metabolic process GO:1901360 301 0.023
positive regulation of catabolic process GO:0009896 4 0.023
cellular aromatic compound metabolic process GO:0006725 295 0.022
regulation of blood pressure GO:0008217 1 0.022
gtp metabolic process GO:0046039 4 0.022
heterocycle metabolic process GO:0046483 290 0.022
blood vessel morphogenesis GO:0048514 216 0.021
cellular ketone metabolic process GO:0042180 11 0.021
cellular response to external stimulus GO:0071496 2 0.021
oxoacid metabolic process GO:0043436 31 0.021
rna metabolic process GO:0016070 219 0.021
cellular component morphogenesis GO:0032989 336 0.021
embryonic organ morphogenesis GO:0048562 274 0.021
protein localization to plasma membrane GO:0072659 1 0.020
compound eye development GO:0048749 2 0.020
meiotic nuclear division GO:0007126 4 0.020
negative regulation of protein phosphorylation GO:0001933 4 0.020
protein localization to nucleus GO:0034504 3 0.020
regulation of developmental process GO:0050793 247 0.020
meiotic cell cycle process GO:1903046 3 0.020
modification dependent macromolecule catabolic process GO:0043632 3 0.020
modification dependent protein catabolic process GO:0019941 3 0.020
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.019
establishment of protein localization to organelle GO:0072594 4 0.019
cell surface receptor signaling pathway GO:0007166 325 0.019
regulation of tube size GO:0035150 2 0.019
neuron differentiation GO:0030182 353 0.019
aromatic compound biosynthetic process GO:0019438 217 0.019
carboxylic acid metabolic process GO:0019752 22 0.019
regulation of protein transport GO:0051223 3 0.019
morphogenesis of an epithelium GO:0002009 333 0.019
guanosine containing compound catabolic process GO:1901069 2 0.019
small molecule metabolic process GO:0044281 77 0.019
heart development GO:0007507 313 0.019
organonitrogen compound metabolic process GO:1901564 74 0.018
nucleobase containing compound metabolic process GO:0006139 274 0.018
locomotion GO:0040011 313 0.018
cellular biosynthetic process GO:0044249 286 0.018
cellular component movement GO:0006928 335 0.018
cellular protein catabolic process GO:0044257 4 0.018
organic acid metabolic process GO:0006082 31 0.018
organic substance biosynthetic process GO:1901576 289 0.018
regulation of nitrogen compound metabolic process GO:0051171 251 0.018
sensory organ development GO:0007423 393 0.018
ubiquitin dependent protein catabolic process GO:0006511 3 0.018
gtp catabolic process GO:0006184 2 0.018
regulation of establishment of protein localization GO:0070201 4 0.018
stem cell proliferation GO:0072089 4 0.017
gene expression GO:0010467 252 0.017
central nervous system development GO:0007417 387 0.017
transcription dna templated GO:0006351 181 0.017
nuclear transport GO:0051169 4 0.017
regulation of multicellular organismal process GO:0051239 277 0.017
cytokinesis GO:0000910 3 0.017
heterocycle biosynthetic process GO:0018130 215 0.017
macromolecule biosynthetic process GO:0009059 227 0.017
generation of neurons GO:0048699 385 0.017
phagocytosis engulfment GO:0006911 1 0.017
autophagy GO:0006914 4 0.016
hormone secretion GO:0046879 2 0.016
establishment of protein localization to plasma membrane GO:0090002 1 0.016
single organism localization GO:1902578 225 0.016
regulation of multicellular organismal development GO:2000026 223 0.016
regulation of reproductive process GO:2000241 4 0.016
system process GO:0003008 185 0.016
positive regulation of cellular amine metabolic process GO:0033240 0 0.016
tube morphogenesis GO:0035239 349 0.016
regulation of cell communication GO:0010646 232 0.016
regulation of blood vessel size GO:0050880 2 0.016
regulation of cytoplasmic transport GO:1903649 4 0.016
regulation of cell activation GO:0050865 1 0.016
regulation of macromolecule metabolic process GO:0060255 317 0.016
regulation of synaptic plasticity GO:0048167 1 0.016
positive regulation of cell cycle GO:0045787 3 0.016
regulation of nucleoside metabolic process GO:0009118 2 0.016
sensory perception of chemical stimulus GO:0007606 3 0.016
single organism metabolic process GO:0044710 217 0.016
membrane invagination GO:0010324 1 0.016
regulation of signaling GO:0023051 235 0.016
regulation of dendrite development GO:0050773 3 0.016
cell migration GO:0016477 237 0.016
developmental growth GO:0048589 166 0.015
nucleobase containing compound biosynthetic process GO:0034654 205 0.015
response to stress GO:0006950 263 0.015
biosynthetic process GO:0009058 294 0.015
cellular response to extracellular stimulus GO:0031668 2 0.015
sensory organ morphogenesis GO:0090596 200 0.015
golgi vesicle transport GO:0048193 3 0.015
amino acid transport GO:0006865 2 0.015
brain development GO:0007420 293 0.015
head development GO:0060322 303 0.015
exocytosis GO:0006887 1 0.015
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.015
mitochondrion organization GO:0007005 4 0.015
angiogenesis GO:0001525 158 0.015
regulation of nucleic acid templated transcription GO:1903506 213 0.015
cellular nitrogen compound biosynthetic process GO:0044271 218 0.015
regulation of cytokine production GO:0001817 3 0.015
regulation of reactive oxygen species metabolic process GO:2000377 2 0.015
regulation of primary metabolic process GO:0080090 311 0.015
rna biosynthetic process GO:0032774 181 0.015
adherens junction organization GO:0034332 4 0.015
synaptic growth at neuromuscular junction GO:0051124 2 0.015
protein import GO:0017038 3 0.015
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.015
stem cell maintenance GO:0019827 4 0.015
nucleic acid metabolic process GO:0090304 244 0.015
nucleic acid templated transcription GO:0097659 181 0.015
regulation of purine nucleotide catabolic process GO:0033121 2 0.015
cellular component disassembly GO:0022411 1 0.015
regulation of gene expression GO:0010468 265 0.015
regulation of peptidyl tyrosine phosphorylation GO:0050730 1 0.015
regionalization GO:0003002 274 0.015
cell projection organization GO:0030030 284 0.014
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 2 0.014
positive regulation of gtpase activity GO:0043547 1 0.014
regulation of metabolic process GO:0019222 359 0.014
organic cyclic compound biosynthetic process GO:1901362 223 0.014
positive regulation of reproductive process GO:2000243 2 0.014
endosomal transport GO:0016197 2 0.014
protein import into nucleus GO:0006606 3 0.014
nuclear import GO:0051170 3 0.014
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.014
immune system process GO:0002376 241 0.014
somatic muscle development GO:0007525 4 0.014
transport GO:0006810 220 0.014
response to drug GO:0042493 3 0.014
regulation of cellular biosynthetic process GO:0031326 245 0.014
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.014
cell morphogenesis GO:0000902 289 0.014
regulation of nucleotide catabolic process GO:0030811 2 0.014
rna localization GO:0006403 4 0.014
skeletal system development GO:0001501 181 0.014
proteasomal protein catabolic process GO:0010498 2 0.014
regulation of cellular metabolic process GO:0031323 320 0.014
regulation of signal transduction GO:0009966 225 0.014
negative regulation of biological process GO:0048519 304 0.014
digestive tract morphogenesis GO:0048546 231 0.014
cytoplasm organization GO:0007028 4 0.014
peptidyl lysine acetylation GO:0018394 2 0.014
positive regulation of nucleoside metabolic process GO:0045979 1 0.014
protein secretion GO:0009306 1 0.013
post embryonic organ development GO:0048569 4 0.013
cognition GO:0050890 1 0.013
regulation of anatomical structure morphogenesis GO:0022603 130 0.013
positive regulation of biological process GO:0048518 253 0.013
positive regulation of immune effector process GO:0002699 3 0.013
regulation of rna metabolic process GO:0051252 224 0.013
single organism nuclear import GO:1902593 3 0.013
cell motility GO:0048870 244 0.013
secondary metabolic process GO:0019748 3 0.013
protein dephosphorylation GO:0006470 3 0.013
cellular amino acid metabolic process GO:0006520 7 0.013
protein acylation GO:0043543 3 0.013
epithelial tube morphogenesis GO:0060562 148 0.013
cell substrate adhesion GO:0031589 4 0.013
chemosensory behavior GO:0007635 1 0.013
positive regulation of secretion GO:0051047 1 0.013
organelle organization GO:0006996 227 0.013
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.013
eye development GO:0001654 277 0.013
protein complex disassembly GO:0043241 1 0.013
digestive tract development GO:0048565 265 0.013
positive regulation of cytoskeleton organization GO:0051495 3 0.012
regulation of macromolecule biosynthetic process GO:0010556 225 0.012
tissue remodeling GO:0048771 4 0.012
localization of cell GO:0051674 244 0.012
cellular macromolecule biosynthetic process GO:0034645 224 0.012
negative regulation of cellular process GO:0048523 283 0.012
gland development GO:0048732 143 0.012
positive regulation of nucleotide catabolic process GO:0030813 1 0.012
muscle structure development GO:0061061 196 0.012
cellular lipid catabolic process GO:0044242 3 0.012
anterior posterior pattern specification GO:0009952 152 0.012
positive regulation of secretion by cell GO:1903532 1 0.012
regulation of cell shape GO:0008360 1 0.012
regulation of ion transmembrane transporter activity GO:0032412 2 0.012
synaptic vesicle localization GO:0097479 1 0.012
transcription from rna polymerase ii promoter GO:0006366 80 0.012
regulation of gtpase activity GO:0043087 2 0.012
hormone transport GO:0009914 2 0.012
macromolecular complex disassembly GO:0032984 1 0.012
single organism organelle organization GO:1902589 199 0.012
internal peptidyl lysine acetylation GO:0018393 2 0.012
interspecies interaction between organisms GO:0044419 4 0.012
digestive system development GO:0055123 289 0.012
regulation of biosynthetic process GO:0009889 250 0.012
cellular carbohydrate metabolic process GO:0044262 4 0.012
regulation of protein targeting GO:1903533 2 0.012
protein targeting to nucleus GO:0044744 3 0.012
regulation of gtp catabolic process GO:0033124 2 0.012
internal protein amino acid acetylation GO:0006475 2 0.012
cell part morphogenesis GO:0032990 246 0.012
positive regulation of gtp catabolic process GO:0033126 1 0.012
fin development GO:0033333 77 0.012
neurotransmitter secretion GO:0007269 2 0.012
actin polymerization or depolymerization GO:0008154 2 0.012
spermatid differentiation GO:0048515 2 0.012
regulation of response to stimulus GO:0048583 269 0.012
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.011
regulation of protein catabolic process GO:0042176 1 0.011
cellular response to reactive oxygen species GO:0034614 2 0.011
phosphatidylinositol 3 kinase signaling GO:0014065 2 0.011
positive regulation of cytokine production GO:0001819 2 0.011
neurotransmitter transport GO:0006836 2 0.011
dicarboxylic acid transport GO:0006835 1 0.011
regulation of cell projection assembly GO:0060491 4 0.011
negative regulation of protein kinase activity GO:0006469 4 0.011
nucleocytoplasmic transport GO:0006913 4 0.011
b cell activation GO:0042113 2 0.011
spermatid development GO:0007286 2 0.011
endocrine process GO:0050886 2 0.011
regulation of synapse assembly GO:0051963 3 0.011
regulation of systemic arterial blood pressure GO:0003073 1 0.011
regulation of neurotransmitter secretion GO:0046928 1 0.011
growth GO:0040007 174 0.011
regulation of mrna processing GO:0050684 3 0.011
circulatory system process GO:0003013 87 0.011
regulation of rna biosynthetic process GO:2001141 213 0.011
protein heterooligomerization GO:0051291 1 0.011
meiotic chromosome segregation GO:0045132 3 0.011
female sex differentiation GO:0046660 4 0.011
specification of symmetry GO:0009799 204 0.011
regulation of autophagy GO:0010506 3 0.011
epithelial cell differentiation GO:0030855 116 0.011
cellular response to nutrient levels GO:0031669 2 0.011
regulation of synapse organization GO:0050807 3 0.011
cellular amide metabolic process GO:0043603 4 0.011
purine ribonucleoside monophosphate catabolic process GO:0009169 4 0.011
lymphocyte proliferation GO:0046651 1 0.011
regulation of intracellular protein transport GO:0033157 3 0.011
neuroblast proliferation GO:0007405 2 0.011
maternal determination of anterior posterior axis embryo GO:0008358 4 0.011
response to carbohydrate GO:0009743 3 0.011
i kappab kinase nf kappab signaling GO:0007249 4 0.011
regulation of alternative mrna splicing via spliceosome GO:0000381 1 0.011
regulation of transcription dna templated GO:0006355 213 0.011
camera type eye development GO:0043010 222 0.011
neuromuscular process controlling balance GO:0050885 3 0.011
skeletal muscle organ development GO:0060538 78 0.011
cell projection morphogenesis GO:0048858 244 0.011
leukocyte proliferation GO:0070661 1 0.011
response to glucose GO:0009749 3 0.010
germ line stem cell maintenance GO:0030718 2 0.010
multicellular organismal response to stress GO:0033555 2 0.010
positive regulation of cellular process GO:0048522 201 0.010
lateral line system development GO:0048925 76 0.010
catechol containing compound metabolic process GO:0009712 2 0.010
membrane lipid biosynthetic process GO:0046467 2 0.010
regulation of metal ion transport GO:0010959 4 0.010
protein acetylation GO:0006473 2 0.010
response to hexose GO:0009746 3 0.010
ribonucleoside monophosphate catabolic process GO:0009158 4 0.010
determination of bilateral symmetry GO:0009855 204 0.010
protein metabolic process GO:0019538 183 0.010
vacuolar transport GO:0007034 2 0.010
establishment of synaptic vesicle localization GO:0097480 1 0.010
regulation of sodium ion transport GO:0002028 2 0.010
regulation of binding GO:0051098 3 0.010
regulation of protein complex disassembly GO:0043244 1 0.010
regulation of protein complex assembly GO:0043254 3 0.010
regulation of hormone secretion GO:0046883 2 0.010
regulation of production of molecular mediator of immune response GO:0002700 1 0.010
negative regulation of catabolic process GO:0009895 3 0.010
cytosolic calcium ion transport GO:0060401 3 0.010

lim2.3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.027
musculoskeletal system disease DOID:17 0 0.017
nervous system disease DOID:863 0 0.015
immune system disease DOID:2914 0 0.010