Danio rerio

0 known processes

lyrm1

LYR motif containing 1

(Aliases: wu:fj36g10,zgc:92830)

lyrm1 biological process predictions


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Biological process GO term ID Process size Probability Func Analog Org
cell morphogenesis involved in differentiation GO:0000904 195 0.153
regulation of nucleic acid templated transcription GO:1903506 213 0.146
heart development GO:0007507 313 0.080
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.078
tube morphogenesis GO:0035239 349 0.076
organic cyclic compound biosynthetic process GO:1901362 223 0.068
cell morphogenesis GO:0000902 289 0.056
cellular macromolecule metabolic process GO:0044260 391 0.055
nuclear transport GO:0051169 4 0.055
regulation of cellular metabolic process GO:0031323 320 0.054
single organism metabolic process GO:0044710 217 0.052
nucleobase containing compound metabolic process GO:0006139 274 0.051
cellular nitrogen compound metabolic process GO:0034641 290 0.050
axon development GO:0061564 166 0.049
neuron development GO:0048666 262 0.046
digestive system development GO:0055123 289 0.046
cellular component movement GO:0006928 335 0.045
morphogenesis of an epithelium GO:0002009 333 0.045
aging GO:0007568 2 0.045
neuron differentiation GO:0030182 353 0.045
cellular component biogenesis GO:0044085 178 0.043
lipid storage GO:0019915 1 0.042
regulation of rna biosynthetic process GO:2001141 213 0.040
nucleocytoplasmic transport GO:0006913 4 0.039
gene expression GO:0010467 252 0.038
digestive tract development GO:0048565 265 0.037
microtubule based process GO:0007017 60 0.037
muscle structure development GO:0061061 196 0.037
regulation of mrna processing GO:0050684 3 0.037
cellular component morphogenesis GO:0032989 336 0.036
cognition GO:0050890 1 0.035
generation of neurons GO:0048699 385 0.035
ear development GO:0043583 127 0.034
establishment of localization GO:0051234 244 0.034
response to external stimulus GO:0009605 264 0.032
pharyngeal muscle development GO:0043282 4 0.032
localization of cell GO:0051674 244 0.031
phosphate containing compound metabolic process GO:0006796 108 0.030
transcription dna templated GO:0006351 181 0.029
cellular nitrogen compound biosynthetic process GO:0044271 218 0.029
rna metabolic process GO:0016070 219 0.029
cell part morphogenesis GO:0032990 246 0.029
immune system process GO:0002376 241 0.028
glial cell migration GO:0008347 3 0.028
regulation of sodium ion transport GO:0002028 2 0.028
heterocycle metabolic process GO:0046483 290 0.027
cell projection morphogenesis GO:0048858 244 0.027
nuclear export GO:0051168 1 0.027
maintenance of location GO:0051235 4 0.027
gastrulation GO:0007369 208 0.026
regulation of multicellular organismal development GO:2000026 223 0.026
cell aging GO:0007569 2 0.026
transcription from rna polymerase iii promoter GO:0006383 1 0.025
stem cell maintenance GO:0019827 4 0.025
phosphorylation GO:0016310 69 0.025
response to chemical GO:0042221 320 0.024
regulation of cellular amine metabolic process GO:0033238 0 0.024
urogenital system development GO:0001655 97 0.024
regulation of anatomical structure morphogenesis GO:0022603 130 0.023
regulation of rna metabolic process GO:0051252 224 0.023
ribosomal small subunit biogenesis GO:0042274 2 0.023
phosphorus metabolic process GO:0006793 109 0.022
myeloid cell homeostasis GO:0002262 56 0.022
sensory organ development GO:0007423 393 0.022
head development GO:0060322 303 0.021
nucleobase containing compound biosynthetic process GO:0034654 205 0.021
neuron projection development GO:0031175 180 0.021
cell motility GO:0048870 244 0.021
vasculature development GO:0001944 278 0.021
phagocytosis GO:0006909 3 0.021
regulation of biosynthetic process GO:0009889 250 0.020
cellular response to chemical stimulus GO:0070887 157 0.020
cellular component assembly GO:0022607 170 0.020
cellular aromatic compound metabolic process GO:0006725 295 0.019
regulation of mrna splicing via spliceosome GO:0048024 3 0.019
cell matrix adhesion GO:0007160 4 0.019
cell surface receptor signaling pathway GO:0007166 325 0.019
regulation of organ growth GO:0046620 3 0.018
sexual reproduction GO:0019953 36 0.018
transport GO:0006810 220 0.018
multicellular organism growth GO:0035264 4 0.018
signal transduction GO:0007165 455 0.018
neuron projection morphogenesis GO:0048812 161 0.018
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.018
positive regulation of gtp catabolic process GO:0033126 1 0.018
nucleic acid metabolic process GO:0090304 244 0.017
larval development GO:0002164 2 0.017
macromolecular complex subunit organization GO:0043933 74 0.017
organic cyclic compound metabolic process GO:1901360 301 0.017
erythrocyte homeostasis GO:0034101 55 0.017
macromolecule biosynthetic process GO:0009059 227 0.017
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.017
regulation of dendrite development GO:0050773 3 0.016
digestive tract morphogenesis GO:0048546 231 0.016
regulation of cellular component organization GO:0051128 86 0.016
stem cell development GO:0048864 82 0.016
angiogenesis GO:0001525 158 0.016
cellular response to radiation GO:0071478 4 0.016
inner ear receptor cell fate commitment GO:0060120 4 0.016
taxis GO:0042330 109 0.015
cellular response to nutrient levels GO:0031669 2 0.015
growth GO:0040007 174 0.015
regulation of neurotransmitter transport GO:0051588 1 0.015
response to light stimulus GO:0009416 46 0.015
regulation of molecular function GO:0065009 70 0.015
regionalization GO:0003002 274 0.015
digestive tract mesoderm development GO:0007502 1 0.015
central nervous system development GO:0007417 387 0.015
epithelial tube morphogenesis GO:0060562 148 0.015
heart morphogenesis GO:0003007 156 0.015
positive regulation of cell cycle GO:0045787 3 0.015
amine metabolic process GO:0009308 2 0.015
positive regulation of biological process GO:0048518 253 0.015
cellular biosynthetic process GO:0044249 286 0.014
photoreceptor cell differentiation GO:0046530 55 0.014
locomotor rhythm GO:0045475 3 0.014
cellular response to extracellular stimulus GO:0031668 2 0.014
meiotic nuclear division GO:0007126 4 0.014
nucleic acid templated transcription GO:0097659 181 0.014
signal transduction in absence of ligand GO:0038034 1 0.014
axonogenesis GO:0007409 152 0.014
neuroblast proliferation GO:0007405 2 0.014
negative regulation of macromolecule metabolic process GO:0010605 76 0.014
epithelial cell differentiation GO:0030855 116 0.014
regulation of cell communication GO:0010646 232 0.014
heterocycle biosynthetic process GO:0018130 215 0.014
positive regulation of protein polymerization GO:0032273 2 0.014
rna biosynthetic process GO:0032774 181 0.014
wnt signaling pathway GO:0016055 80 0.014
eye photoreceptor cell differentiation GO:0001754 45 0.014
nitrogen compound metabolic process GO:0006807 319 0.014
sprouting angiogenesis GO:0002040 53 0.014
guanosine containing compound catabolic process GO:1901069 2 0.014
regulation of cellular biosynthetic process GO:0031326 245 0.014
establishment of localization in cell GO:0051649 77 0.014
guanosine containing compound metabolic process GO:1901068 4 0.014
eye development GO:0001654 277 0.014
embryo development ending in birth or egg hatching GO:0009792 271 0.013
stem cell differentiation GO:0048863 117 0.013
homeostasis of number of cells GO:0048872 62 0.013
regulation of metal ion transport GO:0010959 4 0.013
response to nutrient GO:0007584 3 0.013
embryonic limb morphogenesis GO:0030326 2 0.013
regulation of nitrogen compound metabolic process GO:0051171 251 0.013
lateral inhibition GO:0046331 1 0.013
blood vessel morphogenesis GO:0048514 216 0.013
immune system development GO:0002520 191 0.013
erythrocyte differentiation GO:0030218 54 0.013
protein localization to nucleus GO:0034504 3 0.013
negative chemotaxis GO:0050919 1 0.013
cell projection organization GO:0030030 284 0.012
cell migration GO:0016477 237 0.012
p38mapk cascade GO:0038066 1 0.012
organic acid catabolic process GO:0016054 3 0.012
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.012
stem cell fate commitment GO:0048865 1 0.012
cell proliferation GO:0008283 80 0.012
maturation of ssu rrna GO:0030490 1 0.012
gtp metabolic process GO:0046039 4 0.012
germ line stem cell maintenance GO:0030718 2 0.012
mrna transport GO:0051028 2 0.012
system process GO:0003008 185 0.012
cellular response to starvation GO:0009267 1 0.012
kidney development GO:0001822 92 0.012
peripheral nervous system development GO:0007422 55 0.012
negative regulation of protein kinase activity GO:0006469 4 0.012
retina development in camera type eye GO:0060041 146 0.012
response to oxidative stress GO:0006979 11 0.012
negative regulation of biological process GO:0048519 304 0.012
multi organism process GO:0051704 134 0.012
regulation of cell killing GO:0031341 2 0.011
regulation of gtpase activity GO:0043087 2 0.011
organonitrogen compound metabolic process GO:1901564 74 0.011
tissue remodeling GO:0048771 4 0.011
positive regulation of nucleotide catabolic process GO:0030813 1 0.011
regulation of apoptotic process GO:0042981 98 0.011
regulation of metabolic process GO:0019222 359 0.011
cellular macromolecule biosynthetic process GO:0034645 224 0.011
meiotic chromosome segregation GO:0045132 3 0.011
regulation of hormone secretion GO:0046883 2 0.011
cell cycle g2 m phase transition GO:0044839 4 0.011
regulation of macromolecule biosynthetic process GO:0010556 225 0.011
mesoderm development GO:0007498 88 0.011
cellular protein modification process GO:0006464 100 0.011
regulation of gtp catabolic process GO:0033124 2 0.011
anatomical structure arrangement GO:0048532 2 0.011
negative regulation of gene expression GO:0010629 65 0.011
regulation of establishment of protein localization GO:0070201 4 0.011
proteasomal protein catabolic process GO:0010498 2 0.011
response to radiation GO:0009314 51 0.011
protein metabolic process GO:0019538 183 0.011
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 1 0.011
regulation of developmental process GO:0050793 247 0.011
hematopoietic or lymphoid organ development GO:0048534 191 0.011
intestinal epithelial cell differentiation GO:0060575 3 0.010
rna processing GO:0006396 25 0.010
regulation of mesenchymal cell proliferation GO:0010464 1 0.010
stem cell proliferation GO:0072089 4 0.010
biosynthetic process GO:0009058 294 0.010
hemopoiesis GO:0030097 183 0.010
protein targeting to nucleus GO:0044744 3 0.010
regulation of nucleoside metabolic process GO:0009118 2 0.010
response to glucose GO:0009749 3 0.010
regulation of localization GO:0032879 104 0.010
regulation of cell differentiation GO:0045595 142 0.010
cellular ketone metabolic process GO:0042180 11 0.010
rna localization GO:0006403 4 0.010
gamete generation GO:0007276 33 0.010

lyrm1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of cellular proliferation DOID:14566 0 0.014