Danio rerio

29 known processes

sc:d0348

sc:d0348

sc:d0348 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
larval development GO:0002164 2 0.089
brain development GO:0007420 293 0.076
aging GO:0007568 2 0.069
adult behavior GO:0030534 2 0.061
sensory organ development GO:0007423 393 0.061
system process GO:0003008 185 0.056
response to chemical GO:0042221 320 0.055
cognition GO:0050890 1 0.054
multicellular organism growth GO:0035264 4 0.054
cellular component movement GO:0006928 335 0.054
neuron differentiation GO:0030182 353 0.051
neuron neuron synaptic transmission GO:0007270 1 0.048
morphogenesis of an epithelium GO:0002009 333 0.047
central nervous system development GO:0007417 387 0.047
axon development GO:0061564 166 0.046
peptidyl serine phosphorylation GO:0018105 1 0.044
cellular macromolecule metabolic process GO:0044260 391 0.041
regulation of biological quality GO:0065008 263 0.040
tube morphogenesis GO:0035239 349 0.040
regulation of multicellular organismal process GO:0051239 277 0.040
cellular biosynthetic process GO:0044249 286 0.040
positive regulation of cellular component biogenesis GO:0044089 3 0.039
response to external stimulus GO:0009605 264 0.039
head development GO:0060322 303 0.038
regulation of multicellular organism growth GO:0040014 4 0.037
phagocytosis GO:0006909 3 0.037
positive regulation of transport GO:0051050 2 0.037
signal transduction GO:0007165 455 0.036
generation of neurons GO:0048699 385 0.036
cell projection organization GO:0030030 284 0.036
cellular component morphogenesis GO:0032989 336 0.035
regionalization GO:0003002 274 0.034
maintenance of location GO:0051235 4 0.033
cellular amine metabolic process GO:0044106 2 0.033
exocytosis GO:0006887 1 0.033
establishment of localization GO:0051234 244 0.033
eye development GO:0001654 277 0.032
regulation of synapse organization GO:0050807 3 0.032
regulation of developmental process GO:0050793 247 0.032
response to monosaccharide GO:0034284 3 0.031
cell morphogenesis GO:0000902 289 0.031
response to stress GO:0006950 263 0.031
heart development GO:0007507 313 0.030
growth GO:0040007 174 0.030
cell projection morphogenesis GO:0048858 244 0.029
response to hexose GO:0009746 3 0.029
amine metabolic process GO:0009308 2 0.028
organic substance biosynthetic process GO:1901576 289 0.028
neuron development GO:0048666 262 0.028
regulation of cellular amine metabolic process GO:0033238 0 0.027
regulation of establishment of protein localization GO:0070201 4 0.027
digestive tract morphogenesis GO:0048546 231 0.027
oxoacid metabolic process GO:0043436 31 0.027
guanosine containing compound metabolic process GO:1901068 4 0.026
regulation of muscle contraction GO:0006937 3 0.026
tissue remodeling GO:0048771 4 0.026
regulation of multicellular organismal development GO:2000026 223 0.026
positive regulation of catabolic process GO:0009896 4 0.026
positive regulation of cellular catabolic process GO:0031331 3 0.026
cellular component assembly GO:0022607 170 0.026
response to carbohydrate GO:0009743 3 0.025
regulation of metal ion transport GO:0010959 4 0.025
cell part morphogenesis GO:0032990 246 0.025
localization of cell GO:0051674 244 0.025
synaptic growth at neuromuscular junction GO:0051124 2 0.025
digestive system development GO:0055123 289 0.025
regulation of reproductive process GO:2000241 4 0.024
carboxylic acid metabolic process GO:0019752 22 0.024
stem cell proliferation GO:0072089 4 0.024
response to alkaloid GO:0043279 2 0.024
single organism transport GO:0044765 206 0.024
regulation of cell shape GO:0008360 1 0.024
regulation of synaptic plasticity GO:0048167 1 0.023
cell morphogenesis involved in differentiation GO:0000904 195 0.023
neurological system process GO:0050877 62 0.023
positive regulation of biological process GO:0048518 253 0.023
hemopoiesis GO:0030097 183 0.023
negative regulation of gliogenesis GO:0014014 1 0.022
establishment of synaptic vesicle localization GO:0097480 1 0.022
gtp catabolic process GO:0006184 2 0.022
axonogenesis GO:0007409 152 0.022
regulation of protein transport GO:0051223 3 0.022
regulation of synapse assembly GO:0051963 3 0.022
regulation of cellular ketone metabolic process GO:0010565 7 0.021
regulation of cell differentiation GO:0045595 142 0.021
peptidyl serine modification GO:0018209 2 0.021
cellular response to extracellular stimulus GO:0031668 2 0.021
regulation of ion transmembrane transporter activity GO:0032412 2 0.021
cell motility GO:0048870 244 0.021
neuron projection morphogenesis GO:0048812 161 0.021
lipid storage GO:0019915 1 0.021
inner ear development GO:0048839 126 0.021
regulation of cellular amino acid metabolic process GO:0006521 0 0.021
organic acid metabolic process GO:0006082 31 0.021
specification of symmetry GO:0009799 204 0.021
skeletal system development GO:0001501 181 0.021
transmission of nerve impulse GO:0019226 19 0.021
single organism localization GO:1902578 225 0.021
regulation of macromolecule metabolic process GO:0060255 317 0.021
aromatic compound biosynthetic process GO:0019438 217 0.020
taxis GO:0042330 109 0.020
muscle structure development GO:0061061 196 0.020
cellular component biogenesis GO:0044085 178 0.020
digestive tract development GO:0048565 265 0.020
cellular response to nutrient levels GO:0031669 2 0.020
cellular component assembly involved in morphogenesis GO:0010927 107 0.020
neurotransmitter transport GO:0006836 2 0.020
homeostatic process GO:0042592 142 0.020
guanosine containing compound catabolic process GO:1901069 2 0.020
determination of left right symmetry GO:0007368 179 0.020
rna metabolic process GO:0016070 219 0.020
eye morphogenesis GO:0048592 144 0.019
hormone secretion GO:0046879 2 0.019
regulation of cell development GO:0060284 100 0.019
locomotion GO:0040011 313 0.019
regulation of signaling GO:0023051 235 0.019
neuron projection development GO:0031175 180 0.019
positive regulation of cell cycle GO:0045787 3 0.019
positive regulation of cytosolic calcium ion concentration GO:0007204 4 0.018
regulation of primary metabolic process GO:0080090 311 0.018
biosynthetic process GO:0009058 294 0.018
cell surface receptor signaling pathway GO:0007166 325 0.018
single organism membrane fusion GO:0044801 2 0.018
cellular response to external stimulus GO:0071496 2 0.018
regulation of transmembrane transporter activity GO:0022898 2 0.018
regulation of circadian rhythm GO:0042752 4 0.018
regulation of membrane potential GO:0042391 23 0.018
nucleic acid templated transcription GO:0097659 181 0.018
endosomal transport GO:0016197 2 0.018
smooth muscle contraction GO:0006939 2 0.018
regulation of cell activation GO:0050865 1 0.018
embryonic organ morphogenesis GO:0048562 274 0.018
regulation of response to stimulus GO:0048583 269 0.018
cellular nitrogen compound biosynthetic process GO:0044271 218 0.018
negative regulation of cellular process GO:0048523 283 0.018
embryonic organ development GO:0048568 381 0.018
heterocycle biosynthetic process GO:0018130 215 0.018
developmental growth GO:0048589 166 0.018
nuclear transport GO:0051169 4 0.018
macromolecule biosynthetic process GO:0009059 227 0.018
gtp metabolic process GO:0046039 4 0.017
cellular ketone metabolic process GO:0042180 11 0.017
cell migration GO:0016477 237 0.017
central nervous system neuron differentiation GO:0021953 74 0.017
transport GO:0006810 220 0.017
organism emergence from protective structure GO:0071684 4 0.017
membrane fusion GO:0061025 2 0.017
autophagy GO:0006914 4 0.017
regulation of cellular biosynthetic process GO:0031326 245 0.017
vasculature development GO:0001944 278 0.017
lipid catabolic process GO:0016042 4 0.017
regulation of biosynthetic process GO:0009889 250 0.017
positive regulation of cellular amine metabolic process GO:0033240 0 0.017
rna localization GO:0006403 4 0.017
liver development GO:0001889 96 0.017
carbohydrate homeostasis GO:0033500 1 0.017
single organism metabolic process GO:0044710 217 0.017
immune system process GO:0002376 241 0.017
regulation of axonogenesis GO:0050770 32 0.017
dorsal ventral pattern formation GO:0009953 125 0.017
regulation of metabolic process GO:0019222 359 0.017
ectodermal placode development GO:0071696 37 0.017
gene expression GO:0010467 252 0.017
negative regulation of biological process GO:0048519 304 0.017
glucose homeostasis GO:0042593 1 0.017
regulation of gene expression GO:0010468 265 0.017
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.016
synaptic vesicle localization GO:0097479 1 0.016
regulation of rna metabolic process GO:0051252 224 0.016
protein localization to plasma membrane GO:0072659 1 0.016
establishment of protein localization to plasma membrane GO:0090002 1 0.016
somatic muscle development GO:0007525 4 0.016
camera type eye development GO:0043010 222 0.016
determination of bilateral symmetry GO:0009855 204 0.016
positive regulation of secretion by cell GO:1903532 1 0.016
ion transport GO:0006811 114 0.016
heart process GO:0003015 71 0.016
peptidyl threonine modification GO:0018210 1 0.016
chemotaxis GO:0006935 104 0.016
sensory organ morphogenesis GO:0090596 200 0.016
organelle organization GO:0006996 227 0.016
regulation of nitrogen compound metabolic process GO:0051171 251 0.016
cilium morphogenesis GO:0060271 85 0.015
peptidyl threonine phosphorylation GO:0018107 1 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 0 0.015
regulation of macromolecule biosynthetic process GO:0010556 225 0.015
hematopoietic or lymphoid organ development GO:0048534 191 0.015
glial cell migration GO:0008347 3 0.015
positive regulation of secretion GO:0051047 1 0.015
response to organic substance GO:0010033 153 0.015
protein localization to nucleus GO:0034504 3 0.015
regulation of rna biosynthetic process GO:2001141 213 0.015
ameboidal type cell migration GO:0001667 143 0.015
multicellular organismal signaling GO:0035637 22 0.015
action potential GO:0001508 19 0.015
meiotic nuclear division GO:0007126 4 0.015
hepaticobiliary system development GO:0061008 98 0.015
protein import GO:0017038 3 0.015
hindbrain development GO:0030902 91 0.015
cellular amino acid metabolic process GO:0006520 7 0.015
positive regulation of nucleoside metabolic process GO:0045979 1 0.015
immune system development GO:0002520 191 0.015
regulation of nucleotide catabolic process GO:0030811 2 0.014
ectodermal placode morphogenesis GO:0071697 32 0.014
synaptic vesicle transport GO:0048489 1 0.014
cellular response to starvation GO:0009267 1 0.014
response to wounding GO:0009611 116 0.014
cation transmembrane transport GO:0098655 65 0.014
phagocytosis engulfment GO:0006911 1 0.014
regulation of neurogenesis GO:0050767 87 0.014
positive regulation of camp biosynthetic process GO:0030819 2 0.014
cell substrate adhesion GO:0031589 4 0.014
gland development GO:0048732 143 0.014
axon guidance GO:0007411 86 0.014
blood vessel morphogenesis GO:0048514 216 0.014
chemosensory behavior GO:0007635 1 0.014
mitochondrion organization GO:0007005 4 0.014
gastrulation GO:0007369 208 0.014
nitrogen compound metabolic process GO:0006807 319 0.014
response to glucose GO:0009749 3 0.014
compound eye development GO:0048749 2 0.014
amino acid transport GO:0006865 2 0.014
negative regulation of catabolic process GO:0009895 3 0.014
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.014
regulation of transporter activity GO:0032409 2 0.014
intracellular signal transduction GO:0035556 85 0.014
cellular response to chemical stimulus GO:0070887 157 0.014
protein polymerization GO:0051258 4 0.014
positive regulation of camp metabolic process GO:0030816 2 0.014
regulation of protein complex assembly GO:0043254 3 0.014
oocyte maturation GO:0001556 4 0.014
establishment of protein localization to organelle GO:0072594 4 0.014
positive regulation of purine nucleotide catabolic process GO:0033123 1 0.014
regulation of cytoplasmic transport GO:1903649 4 0.014
response to nutrient GO:0007584 3 0.014
regulation of dendrite development GO:0050773 3 0.014
regulation of nervous system development GO:0051960 90 0.013
protein secretion GO:0009306 1 0.013
regulation of blood pressure GO:0008217 1 0.013
embryonic heart tube development GO:0035050 133 0.013
small molecule metabolic process GO:0044281 77 0.013
retina development in camera type eye GO:0060041 146 0.013
single organism nuclear import GO:1902593 3 0.013
ear development GO:0043583 127 0.013
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.013
actin filament based movement GO:0030048 1 0.013
nucleocytoplasmic transport GO:0006913 4 0.013
nucleobase containing compound biosynthetic process GO:0034654 205 0.013
nucleobase containing compound metabolic process GO:0006139 274 0.013
regulation of intracellular protein transport GO:0033157 3 0.013
regulation of locomotion GO:0040012 55 0.013
response to uv GO:0009411 3 0.013
regulation of transcription dna templated GO:0006355 213 0.013
nerve development GO:0021675 45 0.013
multi organism process GO:0051704 134 0.013
blood circulation GO:0008015 87 0.013
g protein coupled receptor signaling pathway GO:0007186 74 0.013
stem cell maintenance GO:0019827 4 0.013
protein import into nucleus GO:0006606 3 0.013
hatching GO:0035188 4 0.013
regulation of gtpase activity GO:0043087 2 0.013
regulation of exocytosis GO:0017157 1 0.013
regulation of neuronal synaptic plasticity GO:0048168 1 0.013
single organism organelle organization GO:1902589 199 0.013
muscle cell development GO:0055001 115 0.013
wound healing GO:0042060 90 0.013
synaptic target recognition GO:0008039 1 0.013
small molecule catabolic process GO:0044282 3 0.013
epithelial tube morphogenesis GO:0060562 148 0.013
regulation of meiotic cell cycle GO:0051445 1 0.013
long chain fatty acid metabolic process GO:0001676 1 0.013
protein targeting to nucleus GO:0044744 3 0.013
transcription dna templated GO:0006351 181 0.013
neuromuscular process controlling balance GO:0050885 3 0.013
macroautophagy GO:0016236 1 0.013
actin polymerization or depolymerization GO:0008154 2 0.012
regulation of purine nucleotide catabolic process GO:0033121 2 0.012
regeneration GO:0031099 91 0.012
regulation of neuron projection development GO:0010975 40 0.012
regulation of signal transduction GO:0009966 225 0.012
cellular response to radiation GO:0071478 4 0.012
purine nucleoside monophosphate catabolic process GO:0009128 4 0.012
circulatory system process GO:0003013 87 0.012
cellular nitrogen compound metabolic process GO:0034641 290 0.012
synaptic vesicle recycling GO:0036465 1 0.012
olfactory placode development GO:0071698 12 0.012
striated muscle cell development GO:0055002 108 0.012
forebrain development GO:0030900 96 0.012
actin filament polymerization GO:0030041 2 0.012
regulation of anatomical structure morphogenesis GO:0022603 130 0.012
regulation of mrna splicing via spliceosome GO:0048024 3 0.012
macromolecular complex disassembly GO:0032984 1 0.012
melanin metabolic process GO:0006582 2 0.012
embryonic skeletal system development GO:0048706 97 0.012
hormone transport GO:0009914 2 0.012
sensory perception of pain GO:0019233 1 0.012
cranial nerve development GO:0021545 42 0.012
developmental growth involved in morphogenesis GO:0060560 86 0.012
cortical cytoskeleton organization GO:0030865 1 0.012
response to drug GO:0042493 3 0.012
negative regulation of protein phosphorylation GO:0001933 4 0.012
synaptic transmission cholinergic GO:0007271 4 0.012
embryo development ending in birth or egg hatching GO:0009792 271 0.012
post golgi vesicle mediated transport GO:0006892 1 0.012
regulation of protein polymerization GO:0032271 2 0.012
positive regulation of nucleotide catabolic process GO:0030813 1 0.012
chordate embryonic development GO:0043009 271 0.012
cellular aromatic compound metabolic process GO:0006725 295 0.012
neuron projection extension GO:1990138 45 0.012
secondary metabolic process GO:0019748 3 0.012
regulation of protein modification by small protein conjugation or removal GO:1903320 3 0.012
germ line stem cell maintenance GO:0030718 2 0.012
golgi vesicle transport GO:0048193 3 0.012
neurotransmitter secretion GO:0007269 2 0.012
regulation of microtubule cytoskeleton organization GO:0070507 3 0.012
cation transport GO:0006812 81 0.012
nuclear import GO:0051170 3 0.012
regulation of glial cell differentiation GO:0045685 4 0.012
membrane invagination GO:0010324 1 0.012
b cell activation GO:0042113 2 0.012
interspecies interaction between organisms GO:0044419 4 0.012
cellular response to organic substance GO:0071310 105 0.012
developmental programmed cell death GO:0010623 4 0.012
regulation of cell communication GO:0010646 232 0.011
cellular response to light stimulus GO:0071482 4 0.011
atp catabolic process GO:0006200 4 0.011
organic cyclic compound biosynthetic process GO:1901362 223 0.011
mechanosensory behavior GO:0007638 2 0.011
protein targeting to membrane GO:0006612 1 0.011
cell fate commitment GO:0045165 99 0.011
heterocycle metabolic process GO:0046483 290 0.011
cellular macromolecule biosynthetic process GO:0034645 224 0.011
multicellular organismal response to stress GO:0033555 2 0.011
post embryonic organ development GO:0048569 4 0.011
neuronal action potential GO:0019228 18 0.011
regulation of cytokine production GO:0001817 3 0.011
neuroblast proliferation GO:0007405 2 0.011
morphogenesis of an epithelial sheet GO:0002011 49 0.011
regulation of neuron differentiation GO:0045664 56 0.011
regulation of sequestering of calcium ion GO:0051282 4 0.011
negative regulation of protein serine threonine kinase activity GO:0071901 2 0.011
developmental cell growth GO:0048588 52 0.011
neuron projection guidance GO:0097485 86 0.011
striated muscle cell differentiation GO:0051146 129 0.011
nucleic acid metabolic process GO:0090304 244 0.011
actin filament based process GO:0030029 64 0.011
antimicrobial humoral response GO:0019730 2 0.011
lipid homeostasis GO:0055088 3 0.011
negative regulation of reproductive process GO:2000242 3 0.011
negative regulation of secretion by cell GO:1903531 2 0.011
negative regulation of sequestering of calcium ion GO:0051283 4 0.011
fatty acid biosynthetic process GO:0006633 4 0.011
positive regulation of protein polymerization GO:0032273 2 0.011
rna biosynthetic process GO:0032774 181 0.011
regulation of autophagy GO:0010506 3 0.011
regulation of neurotransmitter transport GO:0051588 1 0.011
enzyme linked receptor protein signaling pathway GO:0007167 106 0.011
proteasomal protein catabolic process GO:0010498 2 0.011
regulation of cellular metabolic process GO:0031323 320 0.011
regulation of synaptic growth at neuromuscular junction GO:0008582 1 0.011
cellular localization GO:0051641 97 0.011
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.011
multi organism cellular process GO:0044764 2 0.010
connective tissue development GO:0061448 99 0.010
embryonic skeletal joint development GO:0072498 3 0.010
regulation of localization GO:0032879 104 0.010
glucose import GO:0046323 2 0.010
muscle organ development GO:0007517 101 0.010
macromolecule modification GO:0043412 111 0.010
gas transport GO:0015669 3 0.010
cellular amide metabolic process GO:0043603 4 0.010
maternal determination of anterior posterior axis embryo GO:0008358 4 0.010
activation of mapk activity GO:0000187 3 0.010
carbon dioxide transport GO:0015670 3 0.010
positive regulation of gtp catabolic process GO:0033126 1 0.010
organelle assembly GO:0070925 110 0.010
protein metabolic process GO:0019538 183 0.010
cartilage development GO:0051216 96 0.010
embryonic pattern specification GO:0009880 44 0.010
negative regulation of macromolecule metabolic process GO:0010605 76 0.010
positive regulation of developmental process GO:0051094 50 0.010
transmembrane transport GO:0055085 120 0.010
heart contraction GO:0060047 71 0.010

sc:d0348 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.023
cancer DOID:162 0 0.019
disease of cellular proliferation DOID:14566 0 0.019
organ system cancer DOID:0050686 0 0.019
immune system disease DOID:2914 0 0.016
hematopoietic system disease DOID:74 0 0.016
musculoskeletal system disease DOID:17 0 0.013
bone development disease DOID:0080006 0 0.012
bone disease DOID:0080001 0 0.012
connective tissue disease DOID:65 0 0.012