Danio rerio

44 known processes

cart1

cartilage paired-class homeoprotein 1

cart1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
nucleobase containing compound biosynthetic process GO:0034654 205 0.440
embryonic viscerocranium morphogenesis GO:0048703 52 0.321
skeletal system morphogenesis GO:0048705 102 0.277
embryonic skeletal system morphogenesis GO:0048704 93 0.253
embryonic cranial skeleton morphogenesis GO:0048701 90 0.240
embryonic organ morphogenesis GO:0048562 274 0.235
aromatic compound biosynthetic process GO:0019438 217 0.218
regulation of rna biosynthetic process GO:2001141 213 0.198
regulation of nitrogen compound metabolic process GO:0051171 251 0.192
brain development GO:0007420 293 0.189
regulation of biosynthetic process GO:0009889 250 0.178
head development GO:0060322 303 0.169
stem cell development GO:0048864 82 0.149
mesenchymal cell differentiation GO:0048762 87 0.146
urogenital system development GO:0001655 97 0.141
regulation of nucleobase containing compound metabolic process GO:0019219 250 0.136
otic placode formation GO:0043049 23 0.131
neural crest cell development GO:0014032 62 0.111
regulation of macromolecule metabolic process GO:0060255 317 0.110
developmental pigmentation GO:0048066 48 0.103
skeletal muscle tissue development GO:0007519 67 0.099
nucleotide biosynthetic process GO:0009165 21 0.097
aging GO:0007568 2 0.093
skeletal system development GO:0001501 181 0.091
stem cell proliferation GO:0072089 4 0.091
cartilage morphogenesis GO:0060536 13 0.089
chordate embryonic development GO:0043009 271 0.086
nitrogen compound metabolic process GO:0006807 319 0.086
signal transduction GO:0007165 455 0.086
neural crest cell migration GO:0001755 42 0.081
regulation of chondrocyte differentiation GO:0032330 1 0.075
chondrocyte development GO:0002063 4 0.075
cellular biosynthetic process GO:0044249 286 0.075
retina development in camera type eye GO:0060041 146 0.075
regulation of transcription dna templated GO:0006355 213 0.073
biosynthetic process GO:0009058 294 0.071
pigmentation GO:0043473 85 0.068
cyclic purine nucleotide metabolic process GO:0052652 18 0.066
central nervous system development GO:0007417 387 0.065
mesenchyme development GO:0060485 127 0.065
regulation of primary metabolic process GO:0080090 311 0.061
ectodermal placode formation GO:0060788 26 0.061
rna metabolic process GO:0016070 219 0.060
cartilage development GO:0051216 96 0.059
embryonic skeletal system development GO:0048706 97 0.058
regulation of stem cell proliferation GO:0072091 2 0.057
nucleic acid templated transcription GO:0097659 181 0.055
spinal cord development GO:0021510 46 0.054
generation of neurons GO:0048699 385 0.054
organic cyclic compound biosynthetic process GO:1901362 223 0.053
cranial ganglion development GO:0061550 3 0.052
anterior posterior pattern specification GO:0009952 152 0.049
purine containing compound biosynthetic process GO:0072522 20 0.048
heterocycle metabolic process GO:0046483 290 0.047
macromolecule biosynthetic process GO:0009059 227 0.047
stem cell maintenance GO:0019827 4 0.046
lipid storage GO:0019915 1 0.045
cellular component movement GO:0006928 335 0.045
renal tubule morphogenesis GO:0061333 1 0.045
regulation of tube size GO:0035150 2 0.044
regulation of transcription from rna polymerase ii promoter GO:0006357 114 0.044
compound eye development GO:0048749 2 0.042
cation transport GO:0006812 81 0.042
bone morphogenesis GO:0060349 11 0.042
heart development GO:0007507 313 0.042
positive regulation of protein deacetylation GO:0090312 1 0.041
growth plate cartilage development GO:0003417 2 0.041
embryonic organ development GO:0048568 381 0.041
neuron differentiation GO:0030182 353 0.040
cellular nitrogen compound metabolic process GO:0034641 290 0.039
embryonic camera type eye formation GO:0060900 10 0.038
branchiomeric skeletal muscle development GO:0014707 3 0.037
negative regulation of metabolic process GO:0009892 86 0.037
cellular macromolecule biosynthetic process GO:0034645 224 0.037
camera type eye morphogenesis GO:0048593 108 0.037
regulation of rna metabolic process GO:0051252 224 0.036
gene expression GO:0010467 252 0.036
rna biosynthetic process GO:0032774 181 0.036
neural crest cell differentiation GO:0014033 72 0.036
negative regulation of biological process GO:0048519 304 0.035
positive regulation of nucleic acid templated transcription GO:1903508 57 0.035
regulation of multicellular organismal development GO:2000026 223 0.035
immune system process GO:0002376 241 0.034
cellular macromolecule metabolic process GO:0044260 391 0.034
b cell activation GO:0042113 2 0.034
positive regulation of cell adhesion GO:0045785 1 0.034
heterocycle biosynthetic process GO:0018130 215 0.033
axon development GO:0061564 166 0.033
muscle tissue development GO:0060537 110 0.033
dorsal ventral pattern formation GO:0009953 125 0.032
localization of cell GO:0051674 244 0.032
lateral line development GO:0048882 66 0.032
macromolecule deacylation GO:0098732 3 0.032
embryo development ending in birth or egg hatching GO:0009792 271 0.032
histone modification GO:0016570 20 0.031
retina morphogenesis in camera type eye GO:0060042 79 0.031
regulation of gene expression GO:0010468 265 0.030
kidney epithelium development GO:0072073 23 0.030
endochondral bone morphogenesis GO:0060350 8 0.030
ectodermal placode morphogenesis GO:0071697 32 0.030
regulation of cell activation GO:0050865 1 0.029
mesenchymal cell proliferation GO:0010463 1 0.029
positive regulation of rna metabolic process GO:0051254 59 0.029
cartilage condensation GO:0001502 3 0.029
gastrulation GO:0007369 208 0.029
cell aggregation GO:0098743 3 0.029
sensory organ morphogenesis GO:0090596 200 0.029
regulation of nucleotide biosynthetic process GO:0030808 15 0.029
digestive system development GO:0055123 289 0.028
protein acylation GO:0043543 3 0.028
determination of bilateral symmetry GO:0009855 204 0.028
regulation of blood vessel size GO:0050880 2 0.028
cell morphogenesis involved in differentiation GO:0000904 195 0.028
somatic muscle development GO:0007525 4 0.027
lateral inhibition GO:0046331 1 0.027
embryonic neurocranium morphogenesis GO:0048702 15 0.027
regulation of cell development GO:0060284 100 0.026
cellular nitrogen compound biosynthetic process GO:0044271 218 0.026
endochondral bone growth GO:0003416 2 0.026
axonogenesis GO:0007409 152 0.026
positive regulation of macromolecule metabolic process GO:0010604 93 0.026
organic substance biosynthetic process GO:1901576 289 0.025
pericardium development GO:0060039 1 0.025
single organism localization GO:1902578 225 0.025
cell proliferation GO:0008283 80 0.025
histone deacetylation GO:0016575 2 0.024
cell differentiation in spinal cord GO:0021515 40 0.024
sensory organ development GO:0007423 393 0.024
chromatin organization GO:0006325 22 0.024
negative regulation of cellular macromolecule biosynthetic process GO:2000113 48 0.024
determination of dorsal ventral asymmetry GO:0048262 34 0.024
epithalamus development GO:0021538 10 0.024
positive regulation of chromatin modification GO:1903310 1 0.024
ameboidal type cell migration GO:0001667 143 0.024
regulation of cyclic nucleotide biosynthetic process GO:0030802 15 0.024
digestive tract development GO:0048565 265 0.024
cell migration GO:0016477 237 0.023
regulation of cellular macromolecule biosynthetic process GO:2000112 222 0.023
regulation of neurotransmitter secretion GO:0046928 1 0.023
positive regulation of cellular biosynthetic process GO:0031328 68 0.023
pigment cell differentiation GO:0050931 38 0.023
nephron morphogenesis GO:0072028 2 0.023
regulation of purine nucleotide biosynthetic process GO:1900371 15 0.023
eye development GO:0001654 277 0.023
negative regulation of nitrogen compound metabolic process GO:0051172 59 0.022
negative regulation of transcription dna templated GO:0045892 45 0.022
adult behavior GO:0030534 2 0.022
connective tissue development GO:0061448 99 0.022
heart rudiment development GO:0003313 8 0.022
neural retina development GO:0003407 49 0.022
regulation of protein catabolic process GO:0042176 1 0.022
hatching gland development GO:0048785 3 0.022
monoamine transport GO:0015844 1 0.022
somitogenesis GO:0001756 87 0.021
maintenance of location GO:0051235 4 0.021
eye morphogenesis GO:0048592 144 0.021
lateral line system development GO:0048925 76 0.021
facial nerve development GO:0021561 3 0.021
pharyngeal system development GO:0060037 18 0.021
transcription dna templated GO:0006351 181 0.020
protein acetylation GO:0006473 2 0.020
olfactory lobe development GO:0021988 4 0.020
cell surface receptor signaling pathway GO:0007166 325 0.020
skeletal muscle organ development GO:0060538 78 0.020
chromatin modification GO:0016568 21 0.020
diencephalon development GO:0021536 58 0.020
facial nerve morphogenesis GO:0021610 1 0.019
blood circulation GO:0008015 87 0.019
regulation of cell death GO:0010941 103 0.019
cellular aromatic compound metabolic process GO:0006725 295 0.019
cell motility GO:0048870 244 0.019
nucleobase containing compound metabolic process GO:0006139 274 0.019
determination of digestive tract left right asymmetry GO:0071907 10 0.019
morphogenesis of an epithelium GO:0002009 333 0.019
ribose phosphate biosynthetic process GO:0046390 20 0.019
regulation of macromolecule biosynthetic process GO:0010556 225 0.019
multicellular organismal signaling GO:0035637 22 0.019
positive regulation of translation GO:0045727 1 0.019
mononuclear cell proliferation GO:0032943 1 0.019
covalent chromatin modification GO:0016569 20 0.019
pectoral fin development GO:0033339 50 0.018
protein localization GO:0008104 40 0.018
regionalization GO:0003002 274 0.018
positive regulation of nucleobase containing compound metabolic process GO:0045935 69 0.018
cellular response to extracellular stimulus GO:0031668 2 0.018
hemopoiesis GO:0030097 183 0.018
neurotransmitter transport GO:0006836 2 0.018
positive regulation of cell activation GO:0050867 1 0.018
regulation of cellular biosynthetic process GO:0031326 245 0.018
camera type eye development GO:0043010 222 0.018
internal peptidyl lysine acetylation GO:0018393 2 0.018
retinal cone cell development GO:0046549 8 0.018
cellular response to external stimulus GO:0071496 2 0.018
tissue remodeling GO:0048771 4 0.018
multicellular organism growth GO:0035264 4 0.018
epidermal cell fate specification GO:0009957 4 0.017
digestive tract morphogenesis GO:0048546 231 0.017
phagocytosis GO:0006909 3 0.017
nephron epithelium morphogenesis GO:0072088 1 0.017
negative regulation of gene expression GO:0010629 65 0.017
peptidyl lysine acetylation GO:0018394 2 0.017
developmental growth GO:0048589 166 0.017
vasculature development GO:0001944 278 0.017
regulation of nucleic acid templated transcription GO:1903506 213 0.017
otic vesicle development GO:0071599 42 0.017
cellular component morphogenesis GO:0032989 336 0.017
type b pancreatic cell development GO:0003323 4 0.017
neural tube development GO:0021915 62 0.016
endoderm development GO:0007492 49 0.016
locomotion GO:0040011 313 0.016
cell fate commitment GO:0045165 99 0.016
limb bud formation GO:0060174 2 0.016
neuromast development GO:0048884 46 0.016
negative regulation of cellular biosynthetic process GO:0031327 55 0.016
camp metabolic process GO:0046058 11 0.016
forebrain development GO:0030900 96 0.016
protein deacetylation GO:0006476 3 0.016
neurotransmitter secretion GO:0007269 2 0.016
regulation of binding GO:0051098 3 0.016
otic vesicle formation GO:0030916 27 0.016
positive regulation of stem cell proliferation GO:2000648 1 0.016
internal protein amino acid acetylation GO:0006475 2 0.016
cell fate specification GO:0001708 68 0.016
hematopoietic stem cell differentiation GO:0060218 20 0.016
cyclic nucleotide metabolic process GO:0009187 18 0.016
regulation of organ growth GO:0046620 3 0.016
regulation of mrna processing GO:0050684 3 0.015
regulation of signal transduction by p53 class mediator GO:1901796 9 0.015
negative regulation of cellular process GO:0048523 283 0.015
stem cell fate commitment GO:0048865 1 0.015
cytosolic calcium ion transport GO:0060401 3 0.015
regulation of reproductive process GO:2000241 4 0.015
negative regulation of cyclic nucleotide metabolic process GO:0030800 7 0.015
negative regulation of dna metabolic process GO:0051053 4 0.015
synaptic transmission cholinergic GO:0007271 4 0.015
positive regulation of cellular catabolic process GO:0031331 3 0.015
negative regulation of programmed cell death GO:0043069 58 0.015
determination of left right symmetry GO:0007368 179 0.015
positive regulation of catabolic process GO:0009896 4 0.015
response to nicotine GO:0035094 2 0.015
regulation of cytokine production GO:0001817 3 0.015
cellular localization GO:0051641 97 0.014
negative regulation of nucleobase containing compound metabolic process GO:0045934 59 0.014
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 1 0.014
organelle organization GO:0006996 227 0.014
vitamin biosynthetic process GO:0009110 2 0.014
positive regulation of biological process GO:0048518 253 0.014
morphogenesis of an epithelial sheet GO:0002011 49 0.014
protein deacylation GO:0035601 3 0.014
tube morphogenesis GO:0035239 349 0.014
kidney development GO:0001822 92 0.014
negative regulation of macromolecule metabolic process GO:0010605 76 0.014
positive regulation of histone modification GO:0031058 1 0.014
somite development GO:0061053 96 0.014
regulation of neurotransmitter transport GO:0051588 1 0.014
negative regulation of signal transduction by p53 class mediator GO:1901797 8 0.014
mesendoderm development GO:0048382 10 0.014
establishment of protein localization to organelle GO:0072594 4 0.014
cell substrate adhesion GO:0031589 4 0.014
nucleic acid metabolic process GO:0090304 244 0.014
lateral line nerve glial cell development GO:0048937 6 0.013
lateral line ganglion development GO:0048890 2 0.013
central nervous system neuron differentiation GO:0021953 74 0.013
response to stress GO:0006950 263 0.013
negative regulation of epithelial cell proliferation GO:0050680 1 0.013
erythrocyte differentiation GO:0030218 54 0.013
ion transport GO:0006811 114 0.013
sensory system development GO:0048880 76 0.013
endodermal cell fate commitment GO:0001711 18 0.013
regulation of multicellular organismal process GO:0051239 277 0.013
bone development GO:0060348 14 0.013
cellular amine metabolic process GO:0044106 2 0.013
embryonic epithelial tube formation GO:0001838 17 0.013
cell killing GO:0001906 2 0.013
hindbrain development GO:0030902 91 0.013
intracellular signal transduction GO:0035556 85 0.013
circulatory system process GO:0003013 87 0.013
calcium ion import GO:0070509 4 0.013
negative regulation of purine nucleotide metabolic process GO:1900543 7 0.013
vascular process in circulatory system GO:0003018 6 0.013
phagocytosis engulfment GO:0006911 1 0.013
cell proliferation in forebrain GO:0021846 3 0.013
proteolysis involved in cellular protein catabolic process GO:0051603 3 0.013
positive regulation of chromosome organization GO:2001252 1 0.013
aorta development GO:0035904 4 0.013
lymphocyte proliferation GO:0046651 1 0.012
vasculogenesis GO:0001570 41 0.012
organism emergence from protective structure GO:0071684 4 0.012
protein targeting to nucleus GO:0044744 3 0.012
neuron fate commitment GO:0048663 26 0.012
regulation of biological quality GO:0065008 263 0.012
midbrain hindbrain boundary development GO:0030917 23 0.012
response to uv GO:0009411 3 0.012
organic cyclic compound metabolic process GO:1901360 301 0.012
regulation of blood circulation GO:1903522 32 0.012
regulation of camp biosynthetic process GO:0030817 9 0.012
regulation of signaling GO:0023051 235 0.012
regulation of epithelial to mesenchymal transition GO:0010717 3 0.012
cell morphogenesis involved in neuron differentiation GO:0048667 163 0.012
positive regulation of nitrogen compound metabolic process GO:0051173 69 0.012
g protein coupled receptor signaling pathway GO:0007186 74 0.012
chemosensory behavior GO:0007635 1 0.012
branching morphogenesis of an epithelial tube GO:0048754 15 0.012
angiogenesis GO:0001525 158 0.011
septum transversum development GO:0003343 4 0.011
protein metabolic process GO:0019538 183 0.011
neuron development GO:0048666 262 0.011
organ growth GO:0035265 12 0.011
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 4 0.011
regulation of neural precursor cell proliferation GO:2000177 3 0.011
cell projection organization GO:0030030 284 0.011
regulation of metabolic process GO:0019222 359 0.011
camera type eye photoreceptor cell differentiation GO:0060219 19 0.011
cell matrix adhesion GO:0007160 4 0.011
ectodermal placode development GO:0071696 37 0.011
mesoderm development GO:0007498 88 0.011
water homeostasis GO:0030104 4 0.011
regulation of skeletal muscle cell differentiation GO:2001014 1 0.011
embryonic camera type eye development GO:0031076 29 0.011
olfactory bulb development GO:0021772 4 0.011
positive regulation of leukocyte differentiation GO:1902107 1 0.011
apoptotic process involved in development GO:1902742 2 0.011
neural plate anterior posterior regionalization GO:0021999 8 0.011
single organism cellular localization GO:1902580 46 0.011
nephron tubule morphogenesis GO:0072078 1 0.011
negative regulation of multi organism process GO:0043901 3 0.011
enzyme linked receptor protein signaling pathway GO:0007167 106 0.011
cartilage development involved in endochondral bone morphogenesis GO:0060351 8 0.011
regulation of synapse assembly GO:0051963 3 0.010
embryonic skeletal joint development GO:0072498 3 0.010
regulation of cellular metabolic process GO:0031323 320 0.010
palate development GO:0060021 8 0.010
eye photoreceptor cell differentiation GO:0001754 45 0.010
cell death GO:0008219 121 0.010
smooth muscle tissue development GO:0048745 1 0.010
positive regulation of wound healing GO:0090303 1 0.010
regulation of skeletal muscle fiber development GO:0048742 2 0.010
regulation of programmed cell death GO:0043067 101 0.010
specification of symmetry GO:0009799 204 0.010
negative regulation of chromosome organization GO:2001251 1 0.010
regulation of protein deacetylation GO:0090311 2 0.010
cellular protein catabolic process GO:0044257 4 0.010
organonitrogen compound metabolic process GO:1901564 74 0.010

cart1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

Disease DO term ID Size Probability Func Analog Org
disease of cellular proliferation DOID:14566 0 0.030
cancer DOID:162 0 0.016
organ system cancer DOID:0050686 0 0.016
disease of anatomical entity DOID:7 0 0.010
nervous system disease DOID:863 0 0.010